RNA–Protein interactions for RNA: ENST00000233505.12

CENPA-201, Transcript of centromere protein A, humanhuman

TSL 1 (best) BASIC

Gene CENPA, Length 1,299 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CENPA-201ENST00000233505 PPM1KQ8N3J5 372 aa20.5■□□□□ 0.87
CENPA-201ENST00000233505 TTC9BQ8N6N2 239 aa20.5■□□□□ 0.87
CENPA-201ENST00000233505 LEMD2Q8NC56 503 aa20.5■□□□□ 0.87
CENPA-201ENST00000233505 FAM200AQ8TCP9 573 aa20.5■□□□□ 0.87
CENPA-201ENST00000233505 PHF7Q9BWX1 381 aaPredicted RBP20.5■□□□□ 0.87
CENPA-201ENST00000233505 ELOVL4Q9GZR5 314 aa20.5■□□□□ 0.87
CENPA-201ENST00000233505 PIDD1Q9HB75 910 aa20.5■□□□□ 0.87
CENPA-201ENST00000233505 ATP8B3O60423 1300 aa20.5■□□□□ 0.87
CENPA-201ENST00000233505 CLUHO75153 1309 aa20.5■□□□□ 0.87
CENPA-201ENST00000233505 PON1P27169 355 aa20.49■□□□□ 0.87
CENPA-201ENST00000233505 COPB1P53618 953 aaKnown RBP20.49■□□□□ 0.87
CENPA-201ENST00000233505 EPHB3P54753 998 aa20.49■□□□□ 0.87
CENPA-201ENST00000233505 RPL10AP62906 217 aaKnown RBP20.49■□□□□ 0.87
CENPA-201ENST00000233505 LRMPQ12912 555 aa20.49■□□□□ 0.87
CENPA-201ENST00000233505 APTXQ7Z2E3 356 aaKnown RBP20.49■□□□□ 0.87
CENPA-201ENST00000233505 ACOT1Q86TX2 421 aa20.49■□□□□ 0.87
CENPA-201ENST00000233505 TWNKQ96RR1 684 aa20.49■□□□□ 0.87
CENPA-201ENST00000233505 SEPT5Q99719 369 aaPredicted RBP20.49■□□□□ 0.87
CENPA-201ENST00000233505 CRACR2AQ9BSW2 395 aa20.49■□□□□ 0.87
CENPA-201ENST00000233505 POMKQ9H5K3 350 aa20.49■□□□□ 0.87
CENPA-201ENST00000233505 CBX8Q9HC52 389 aa20.49■□□□□ 0.87
CENPA-201ENST00000233505 APEX2Q9UBZ4 518 aa20.49■□□□□ 0.87
CENPA-201ENST00000233505 SLC27A5Q9Y2P5 690 aa20.49■□□□□ 0.87
CENPA-201ENST00000233505 LGALS16A8MUM7 142 aa20.48■□□□□ 0.87
CENPA-201ENST00000233505 ATF6P18850 670 aa20.48■□□□□ 0.87
CENPA-201ENST00000233505 CDK11BP21127 795 aaKnown RBP20.48■□□□□ 0.87
CENPA-201ENST00000233505 ACO1P21399 889 aaKnown RBP20.48■□□□□ 0.87
CENPA-201ENST00000233505 EPHA5P54756 1037 aa20.48■□□□□ 0.87
CENPA-201ENST00000233505 VEPH1Q14D04 833 aa20.48■□□□□ 0.87
CENPA-201ENST00000233505 IQCEQ6IPM2 695 aa20.48■□□□□ 0.87
CENPA-201ENST00000233505 PHLDB3Q6NSJ2 640 aa20.48■□□□□ 0.87
CENPA-201ENST00000233505 LRSAM1Q6UWE0 723 aa20.48■□□□□ 0.87
CENPA-201ENST00000233505 ITIH5Q86UX2 942 aa20.48■□□□□ 0.87
CENPA-201ENST00000233505 ARHGEF19Q8IW93 802 aa20.48■□□□□ 0.87
CENPA-201ENST00000233505 FEZF2Q8TBJ5 459 aa20.48■□□□□ 0.87
CENPA-201ENST00000233505 PSMG2Q969U7 264 aa20.48■□□□□ 0.87
CENPA-201ENST00000233505 B3GNT5Q9BYG0 378 aa20.48■□□□□ 0.87
CENPA-201ENST00000233505 CEP72Q9P209 647 aa20.48■□□□□ 0.87
CENPA-201ENST00000233505 CDH22Q9UJ99 828 aa20.48■□□□□ 0.87
CENPA-201ENST00000233505 USTQ9Y2C2 406 aa20.48■□□□□ 0.87
CENPA-201ENST00000233505 PES1O00541 588 aaKnown RBP20.47■□□□□ 0.87
CENPA-201ENST00000233505 PTPN2P17706 415 aa20.47■□□□□ 0.87
CENPA-201ENST00000233505 SLC9A1P19634 815 aa20.47■□□□□ 0.87
CENPA-201ENST00000233505 RFX1P22670 979 aa20.47■□□□□ 0.87
CENPA-201ENST00000233505 CYP2F1P24903 491 aa20.47■□□□□ 0.87
CENPA-201ENST00000233505 RAD23BP54727 409 aa20.47■□□□□ 0.87
CENPA-201ENST00000233505 TPM4P67936 248 aa20.47■□□□□ 0.87
CENPA-201ENST00000233505 CYP27A1Q02318 531 aa20.47■□□□□ 0.87
CENPA-201ENST00000233505 FKBP15Q5T1M5 1219 aa20.47■□□□□ 0.87
CENPA-201ENST00000233505 GRASPQ7Z6J2 395 aaPredicted RBP20.47■□□□□ 0.87
CENPA-201ENST00000233505 FAM35AQ86V20 835 aa20.47■□□□□ 0.87
CENPA-201ENST00000233505 ADHFE1Q8IWW8 467 aa20.47■□□□□ 0.87
CENPA-201ENST00000233505 FUKQ8N0W3 1084 aa20.47■□□□□ 0.87
CENPA-201ENST00000233505 TMEM176AQ96HP8 235 aa20.47■□□□□ 0.87
CENPA-201ENST00000233505 SPATA17Q96L03 361 aa20.47■□□□□ 0.87
CENPA-201ENST00000233505 C8orf48Q96LL4 319 aa20.47■□□□□ 0.87
CENPA-201ENST00000233505 ZNF512Q96ME7 567 aaPredicted RBP20.47■□□□□ 0.87
CENPA-201ENST00000233505 KREMEN1Q96MU8 473 aa20.47■□□□□ 0.87
CENPA-201ENST00000233505 VPS16Q9H269 839 aa20.47■□□□□ 0.87
CENPA-201ENST00000233505 SIX2Q9NPC8 291 aa20.47■□□□□ 0.87
CENPA-201ENST00000233505 DNMT3BQ9UBC3 853 aaKnown RBP20.47■□□□□ 0.87
CENPA-201ENST00000233505 CNTN6Q9UQ52 1028 aa20.47■□□□□ 0.87
CENPA-201ENST00000233505 TRIM66O15016 1216 aa20.46■□□□□ 0.87
CENPA-201ENST00000233505 MICAL2O94851 1124 aa20.46■□□□□ 0.87
CENPA-201ENST00000233505 PAEPP09466 180 aa20.46■□□□□ 0.87
CENPA-201ENST00000233505 ATP1A3P13637 1013 aa20.46■□□□□ 0.87
CENPA-201ENST00000233505 BDNFP23560 247 aa20.46■□□□□ 0.87
CENPA-201ENST00000233505 ZNF132P52740 706 aa20.46■□□□□ 0.87
CENPA-201ENST00000233505 ZNF445P59923 1031 aa20.46■□□□□ 0.87
CENPA-201ENST00000233505 ZP2Q05996 745 aa20.46■□□□□ 0.87
CENPA-201ENST00000233505 PABPC1LQ4VXU2 614 aaKnown RBP20.46■□□□□ 0.87
CENPA-201ENST00000233505 DPY19L2P1Q6NXN4 242 aa20.46■□□□□ 0.87
CENPA-201ENST00000233505 PAQR9Q6ZVX9 377 aa20.46■□□□□ 0.87
CENPA-201ENST00000233505 RRAGAQ7L523 313 aa20.46■□□□□ 0.87
CENPA-201ENST00000233505 SLC4A11Q8NBS3 891 aa20.46■□□□□ 0.87
CENPA-201ENST00000233505 KAT5Q92993 513 aa20.46■□□□□ 0.87
CENPA-201ENST00000233505 SMARCD1Q96GM5 515 aa20.46■□□□□ 0.87
CENPA-201ENST00000233505 HNRNPABQ99729 332 aaKnown RBP20.46■□□□□ 0.87
CENPA-201ENST00000233505 ZNF518BQ9C0D4 1074 aa20.46■□□□□ 0.87
CENPA-201ENST00000233505 CD320Q9NPF0 282 aa20.46■□□□□ 0.87
CENPA-201ENST00000233505 PLCB1Q9NQ66 1216 aa20.46■□□□□ 0.87
CENPA-201ENST00000233505 ASAH2Q9NR71 780 aa20.46■□□□□ 0.87
CENPA-201ENST00000233505 KIAA1257Q9ULG3 409 aa20.46■□□□□ 0.87
CENPA-201ENST00000233505 DAAM1Q9Y4D1 1078 aa20.46■□□□□ 0.87
CENPA-201ENST00000233505 SOAT2O75908 522 aa20.45■□□□□ 0.86
CENPA-201ENST00000233505 RHOP08100 348 aa20.45■□□□□ 0.86
CENPA-201ENST00000233505 MFAP3P55082 362 aa20.45■□□□□ 0.86
CENPA-201ENST00000233505 KCNMA1Q12791 1236 aa20.45■□□□□ 0.86
CENPA-201ENST00000233505 ORC1Q13415 861 aa20.45■□□□□ 0.86
CENPA-201ENST00000233505 ARHGAP17Q68EM7 881 aa20.45■□□□□ 0.86
CENPA-201ENST00000233505 TMC8Q8IU68 726 aa20.45■□□□□ 0.86
CENPA-201ENST00000233505 C12orf29Q8N999 325 aa20.45■□□□□ 0.86
CENPA-201ENST00000233505 SLC2A14Q8TDB8 520 aa20.45■□□□□ 0.86
CENPA-201ENST00000233505 LPIN3Q9BQK8 851 aa20.45■□□□□ 0.86
CENPA-201ENST00000233505 LRRC3Q9BY71 257 aa20.45■□□□□ 0.86
CENPA-201ENST00000233505 TSPY26PQ9H489 355 aa20.45■□□□□ 0.86
CENPA-201ENST00000233505 UBE2TQ9NPD8 197 aaPredicted RBP20.45■□□□□ 0.86
CENPA-201ENST00000233505 NR2E1Q9Y466 385 aa20.45■□□□□ 0.86
CENPA-201ENST00000233505 C19orf67A6NJJ6 358 aa20.44■□□□□ 0.86
CENPA-201ENST00000233505 LOC730098B7Z3J9 87 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms