RNA–Protein interactions for RNA: ENST00000233146.6

MSH2-201, Transcript of mutS homolog 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH2, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-201ENST00000233146 POC1B-GALNT4F8VUJ3 575 aa13.61□□□□□ -0.23
MSH2-201ENST00000233146 PRKAB2O43741 272 aa13.61□□□□□ -0.23
MSH2-201ENST00000233146 IL1BP01584 269 aa13.61□□□□□ -0.23
MSH2-201ENST00000233146 MAGEA4P43358 317 aa13.61□□□□□ -0.23
MSH2-201ENST00000233146 TUBA1BP68363 451 aa13.61□□□□□ -0.23
MSH2-201ENST00000233146 RGS21Q2M5E4 152 aa13.61□□□□□ -0.23
MSH2-201ENST00000233146 MDH1BQ5I0G3 518 aa13.61□□□□□ -0.23
MSH2-201ENST00000233146 PGM2L1Q6PCE3 622 aa13.61□□□□□ -0.23
MSH2-201ENST00000233146 TTC23LQ6PF05 361 aa13.61□□□□□ -0.23
MSH2-201ENST00000233146 TUBA1AQ71U36 451 aa13.61□□□□□ -0.23
MSH2-201ENST00000233146 DGKHQ86XP1 1220 aa13.61□□□□□ -0.23
MSH2-201ENST00000233146 CALML4Q96GE6 196 aa13.61□□□□□ -0.23
MSH2-201ENST00000233146 CCDC138Q96M89 665 aa13.61□□□□□ -0.23
MSH2-201ENST00000233146 CFAP57Q96MR6 1250 aa13.61□□□□□ -0.23
MSH2-201ENST00000233146 ZSCAN10Q96SZ4 725 aaPredicted RBP13.61□□□□□ -0.23
MSH2-201ENST00000233146 GPRC5DQ9NZD1 345 aa13.61□□□□□ -0.23
MSH2-201ENST00000233146 ARHGAP42A6NI28 874 aa13.61□□□□□ -0.23
MSH2-201ENST00000233146 ZNF701M0R085 212 aaPredicted RBP13.61□□□□□ -0.23
MSH2-201ENST00000233146 CHEK2O96017 543 aa13.61□□□□□ -0.23
MSH2-201ENST00000233146 ACADSBP45954 432 aa13.61□□□□□ -0.23
MSH2-201ENST00000233146 GRB10Q13322 594 aa13.61□□□□□ -0.23
MSH2-201ENST00000233146 SPCS2Q15005 226 aa13.61□□□□□ -0.23
MSH2-201ENST00000233146 HSF5Q4G112 596 aaPredicted RBP13.61□□□□□ -0.23
MSH2-201ENST00000233146 C1orf141Q5JVX7 400 aa13.61□□□□□ -0.23
MSH2-201ENST00000233146 IFIT1BQ5T764 474 aaKnown RBP13.61□□□□□ -0.23
MSH2-201ENST00000233146 CENPUQ71F23 418 aa13.61□□□□□ -0.23
MSH2-201ENST00000233146 GRAMD2AQ8IUY3 354 aa13.61□□□□□ -0.23
MSH2-201ENST00000233146 MMAAQ8IVH4 418 aaKnown RBP13.61□□□□□ -0.23
MSH2-201ENST00000233146 PSPC1Q8WXF1 523 aaKnown RBP13.61□□□□□ -0.23
MSH2-201ENST00000233146 HSPH1Q92598 858 aa13.61□□□□□ -0.23
MSH2-201ENST00000233146 SYT11Q9BT88 431 aa13.61□□□□□ -0.23
MSH2-201ENST00000233146 CCDC106Q9BWC9 280 aa13.61□□□□□ -0.23
MSH2-201ENST00000233146 NUF2Q9BZD4 464 aa13.61□□□□□ -0.23
MSH2-201ENST00000233146 DCLK3Q9C098 648 aa13.61□□□□□ -0.23
MSH2-201ENST00000233146 VPS45Q9NRW7 570 aa13.61□□□□□ -0.23
MSH2-201ENST00000233146 ERGIC3Q9Y282 383 aa13.61□□□□□ -0.23
MSH2-201ENST00000233146 MYH14Q7Z406 1995 aaKnown RBP13.6□□□□□ -0.23
MSH2-201ENST00000233146 GNPATO15228 680 aa13.6□□□□□ -0.23
MSH2-201ENST00000233146 UGT1A9O60656 530 aa13.6□□□□□ -0.23
MSH2-201ENST00000233146 S100BP04271 92 aaPredicted RBP13.6□□□□□ -0.23
MSH2-201ENST00000233146 OR52Z1P0C646 297 aa13.6□□□□□ -0.23
MSH2-201ENST00000233146 GYS1P13807 737 aa13.6□□□□□ -0.23
MSH2-201ENST00000233146 KRT4P19013 534 aa13.6□□□□□ -0.23
MSH2-201ENST00000233146 UGT1A6P19224 532 aa13.6□□□□□ -0.23
MSH2-201ENST00000233146 UGT1A1P22309 533 aa13.6□□□□□ -0.23
MSH2-201ENST00000233146 UGT1A4P22310 534 aa13.6□□□□□ -0.23
MSH2-201ENST00000233146 UGT1A3P35503 534 aa13.6□□□□□ -0.23
MSH2-201ENST00000233146 UGT1A5P35504 534 aa13.6□□□□□ -0.23
MSH2-201ENST00000233146 HNRNPFP52597 415 aaKnown RBP13.6□□□□□ -0.23
MSH2-201ENST00000233146 OASLQ15646 514 aaKnown RBP13.6□□□□□ -0.23
MSH2-201ENST00000233146 USP43Q70EL4 1123 aa13.6□□□□□ -0.23
MSH2-201ENST00000233146 CYP2U1Q7Z449 544 aa13.6□□□□□ -0.23
MSH2-201ENST00000233146 KBTBD6Q86V97 674 aa13.6□□□□□ -0.23
MSH2-201ENST00000233146 LILRB4Q8NHJ6 448 aa13.6□□□□□ -0.23
MSH2-201ENST00000233146 ERLEC1Q96DZ1 483 aa13.6□□□□□ -0.23
MSH2-201ENST00000233146 PSD2Q9BQI7 771 aa13.6□□□□□ -0.23
MSH2-201ENST00000233146 CDH19Q9H159 772 aa13.6□□□□□ -0.23
MSH2-201ENST00000233146 UGT1A7Q9HAW7 530 aa13.6□□□□□ -0.23
MSH2-201ENST00000233146 UGT1A10Q9HAW8 530 aa13.6□□□□□ -0.23
MSH2-201ENST00000233146 UGT1A8Q9HAW9 530 aa13.6□□□□□ -0.23
MSH2-201ENST00000233146 LRRC4BQ9NT99 713 aa13.6□□□□□ -0.23
MSH2-201ENST00000233146 STK17AQ9UEE5 414 aa13.6□□□□□ -0.23
MSH2-201ENST00000233146 EBF1Q9UH73 591 aa13.6□□□□□ -0.23
MSH2-201ENST00000233146 MARF1Q9Y4F3 1742 aaKnown RBP13.6□□□□□ -0.23
MSH2-201ENST00000233146 FAM237BA0A1B0GVD1 139 aa13.6□□□□□ -0.23
MSH2-201ENST00000233146 ATF2P15336 505 aa13.6□□□□□ -0.23
MSH2-201ENST00000233146 CCSAPQ6IQ19 270 aaPredicted RBP13.6□□□□□ -0.23
MSH2-201ENST00000233146 CYP4F22Q6NT55 531 aa13.6□□□□□ -0.23
MSH2-201ENST00000233146 TOM1L2Q6ZVM7 507 aa13.6□□□□□ -0.23
MSH2-201ENST00000233146 ANKS1BQ7Z6G8 1248 aa13.6□□□□□ -0.23
MSH2-201ENST00000233146 TICAM1Q8IUC6 712 aa13.6□□□□□ -0.23
MSH2-201ENST00000233146 RTKN2Q8IZC4 609 aa13.6□□□□□ -0.23
MSH2-201ENST00000233146 HELQQ8TDG4 1101 aa13.6□□□□□ -0.23
MSH2-201ENST00000233146 C6orf203Q9P0P8 240 aaPredicted RBP13.6□□□□□ -0.23
MSH2-201ENST00000233146 POU2F3Q9UKI9 436 aa13.6□□□□□ -0.23
MSH2-201ENST00000233146 HDAC9Q9UKV0 1011 aa13.6□□□□□ -0.23
MSH2-201ENST00000233146 SCINQ9Y6U3 715 aa13.6□□□□□ -0.23
MSH2-201ENST00000233146 ANKRD62A6NC57 917 aa13.59□□□□□ -0.23
MSH2-201ENST00000233146 DDAH1O94760 285 aa13.59□□□□□ -0.23
MSH2-201ENST00000233146 ENO2P09104 434 aaPredicted RBP13.59□□□□□ -0.23
MSH2-201ENST00000233146 YWHAGP61981 247 aaKnown RBP eCLIP13.59□□□□□ -0.23
MSH2-201ENST00000233146 MTMR2Q13614 643 aa13.59□□□□□ -0.23
MSH2-201ENST00000233146 ARHGEF6Q15052 776 aa13.59□□□□□ -0.23
MSH2-201ENST00000233146 TBCCQ15814 346 aa13.59□□□□□ -0.23
MSH2-201ENST00000233146 FXNQ16595 210 aa13.59□□□□□ -0.23
MSH2-201ENST00000233146 TIGD2Q4W5G0 525 aa13.59□□□□□ -0.23
MSH2-201ENST00000233146 RFPL4BQ6ZWI9 263 aa13.59□□□□□ -0.23
MSH2-201ENST00000233146 PRPF39Q86UA1 669 aaKnown RBP13.59□□□□□ -0.23
MSH2-201ENST00000233146 ATP6V0D2Q8N8Y2 350 aa13.59□□□□□ -0.23
MSH2-201ENST00000233146 GOLM1Q8NBJ4 401 aa13.59□□□□□ -0.23
MSH2-201ENST00000233146 PLBD2Q8NHP8 589 aa13.59□□□□□ -0.23
MSH2-201ENST00000233146 C1orf54Q8WWF1 131 aa13.59□□□□□ -0.23
MSH2-201ENST00000233146 LARP4BQ92615 738 aaKnown RBP13.59□□□□□ -0.23
MSH2-201ENST00000233146 CD101Q93033 1021 aa13.59□□□□□ -0.23
MSH2-201ENST00000233146 ISOC1Q96CN7 298 aa13.59□□□□□ -0.23
MSH2-201ENST00000233146 MED30Q96HR3 178 aa13.59□□□□□ -0.23
MSH2-201ENST00000233146 SPATA17Q96L03 361 aa13.59□□□□□ -0.23
MSH2-201ENST00000233146 SACM1LQ9NTJ5 587 aa13.59□□□□□ -0.23
MSH2-201ENST00000233146 KCNK4Q9NYG8 393 aa13.59□□□□□ -0.23
MSH2-201ENST00000233146 PPARGC1AQ9UBK2 798 aaKnown RBP13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms