RNA–Protein interactions for RNA: ENST00000231136.3

PCDHB6-201, Transcript of protocadherin beta 6, humanhuman

APPRIS P1 BASIC

Gene PCDHB6, Length 3,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB6-201ENST00000231136 CCDC38Q502W7 563 aa13.73□□□□□ -0.21
PCDHB6-201ENST00000231136 GLE1Q53GS7 698 aaKnown RBP13.73□□□□□ -0.21
PCDHB6-201ENST00000231136 PPP1R26Q5T8A7 1209 aaPredicted RBP13.73□□□□□ -0.21
PCDHB6-201ENST00000231136 SH3PXD2AQ5TCZ1 1133 aa13.73□□□□□ -0.21
PCDHB6-201ENST00000231136 RNF180Q86T96 592 aa13.73□□□□□ -0.21
PCDHB6-201ENST00000231136 JOSD2Q8TAC2 188 aa13.73□□□□□ -0.21
PCDHB6-201ENST00000231136 FMO2Q99518 471 aa13.73□□□□□ -0.21
PCDHB6-201ENST00000231136 FAM105AQ9NUU6 356 aa13.73□□□□□ -0.21
PCDHB6-201ENST00000231136 NCANO14594 1321 aa13.73□□□□□ -0.21
PCDHB6-201ENST00000231136 XIRP2A4UGR9 3374 aa13.73□□□□□ -0.21
PCDHB6-201ENST00000231136 CLGNO14967 610 aa13.73□□□□□ -0.21
PCDHB6-201ENST00000231136 LIG3P49916 1009 aa13.73□□□□□ -0.21
PCDHB6-201ENST00000231136 CLCNKBP51801 687 aa13.73□□□□□ -0.21
PCDHB6-201ENST00000231136 PTPN11Q06124 597 aaPredicted RBP13.73□□□□□ -0.21
PCDHB6-201ENST00000231136 MAMLD1Q13495 774 aa13.73□□□□□ -0.21
PCDHB6-201ENST00000231136 LPIN1Q14693 890 aa13.73□□□□□ -0.21
PCDHB6-201ENST00000231136 TAF2Q6P1X5 1199 aa13.73□□□□□ -0.21
PCDHB6-201ENST00000231136 SLFN11Q7Z7L1 901 aa13.73□□□□□ -0.21
PCDHB6-201ENST00000231136 GPATCH11Q8N954 259 aa13.73□□□□□ -0.21
PCDHB6-201ENST00000231136 MGARPQ8TDB4 240 aa13.73□□□□□ -0.21
PCDHB6-201ENST00000231136 GLT1D1Q96MS3 346 aa13.73□□□□□ -0.21
PCDHB6-201ENST00000231136 SCN10AQ9Y5Y9 1956 aa13.73□□□□□ -0.21
PCDHB6-201ENST00000231136 A0A1W2PQ45 241 aaPredicted RBP13.72□□□□□ -0.21
PCDHB6-201ENST00000231136 A0A1W2PQY0 241 aa13.72□□□□□ -0.21
PCDHB6-201ENST00000231136 GOLGA8KD6RF30 607 aa13.72□□□□□ -0.21
PCDHB6-201ENST00000231136 EBAG9O00559 213 aa13.72□□□□□ -0.21
PCDHB6-201ENST00000231136 TLR3O15455 904 aaKnown RBP13.72□□□□□ -0.21
PCDHB6-201ENST00000231136 FKTNO75072 461 aa13.72□□□□□ -0.21
PCDHB6-201ENST00000231136 CILPO75339 1184 aa13.72□□□□□ -0.21
PCDHB6-201ENST00000231136 MICAL2O94851 1124 aa13.72□□□□□ -0.21
PCDHB6-201ENST00000231136 IVLP07476 585 aa13.72□□□□□ -0.21
PCDHB6-201ENST00000231136 GTF2A1P52655 376 aaPredicted RBP13.72□□□□□ -0.21
PCDHB6-201ENST00000231136 PTP4A2Q12974 167 aa13.72□□□□□ -0.21
PCDHB6-201ENST00000231136 SMTNL2Q2TAL5 461 aa13.72□□□□□ -0.21
PCDHB6-201ENST00000231136 DCAF4L1Q3SXM0 396 aa13.72□□□□□ -0.21
PCDHB6-201ENST00000231136 KCNT1Q5JUK3 1230 aa13.72□□□□□ -0.21
PCDHB6-201ENST00000231136 MAP3K21Q5TCX8 1036 aa13.72□□□□□ -0.21
PCDHB6-201ENST00000231136 AGMOQ6ZNB7 445 aa13.72□□□□□ -0.21
PCDHB6-201ENST00000231136 B4GALNT4Q76KP1 1039 aa13.72□□□□□ -0.21
PCDHB6-201ENST00000231136 PRUNE1Q86TP1 453 aa13.72□□□□□ -0.21
PCDHB6-201ENST00000231136 TMEM176AQ96HP8 235 aa13.72□□□□□ -0.21
PCDHB6-201ENST00000231136 HES6Q96HZ4 224 aa13.72□□□□□ -0.21
PCDHB6-201ENST00000231136 MIS12Q9H081 205 aa13.72□□□□□ -0.21
PCDHB6-201ENST00000231136 UPF3AQ9H1J1 476 aaKnown RBP13.72□□□□□ -0.21
PCDHB6-201ENST00000231136 HMX1Q9NP08 348 aaPredicted RBP13.72□□□□□ -0.21
PCDHB6-201ENST00000231136 STARD7Q9NQZ5 370 aa13.72□□□□□ -0.21
PCDHB6-201ENST00000231136 GTF3C4Q9UKN8 822 aa13.72□□□□□ -0.21
PCDHB6-201ENST00000231136 TET1Q8NFU7 2136 aa13.72□□□□□ -0.21
PCDHB6-201ENST00000231136 H0YHG0 523 aa13.72□□□□□ -0.21
PCDHB6-201ENST00000231136 PQBP1O60828 265 aaKnown RBP13.72□□□□□ -0.21
PCDHB6-201ENST00000231136 CYP1A2P05177 515 aa13.72□□□□□ -0.21
PCDHB6-201ENST00000231136 CENPCQ03188 943 aa13.72□□□□□ -0.21
PCDHB6-201ENST00000231136 ZBTB6Q15916 424 aa13.72□□□□□ -0.21
PCDHB6-201ENST00000231136 ALKAL1Q6UXT8 129 aa13.72□□□□□ -0.21
PCDHB6-201ENST00000231136 GSTA5Q7RTV2 222 aa13.72□□□□□ -0.21
PCDHB6-201ENST00000231136 FBXO25Q8TCJ0 367 aa13.72□□□□□ -0.21
PCDHB6-201ENST00000231136 RNF25Q96BH1 459 aaPredicted RBP13.72□□□□□ -0.21
PCDHB6-201ENST00000231136 SYNCQ9H7C4 482 aa13.72□□□□□ -0.21
PCDHB6-201ENST00000231136 MLXIPLQ9NP71 852 aa13.72□□□□□ -0.21
PCDHB6-201ENST00000231136 GDF3Q9NR23 364 aa13.72□□□□□ -0.21
PCDHB6-201ENST00000231136 ZNF236Q9UL36 1845 aa13.72□□□□□ -0.21
PCDHB6-201ENST00000231136 A8MXQ7 604 aa13.72□□□□□ -0.21
PCDHB6-201ENST00000231136 MYO1CO00159 1063 aa13.72□□□□□ -0.21
PCDHB6-201ENST00000231136 ACSL3O95573 720 aa13.72□□□□□ -0.21
PCDHB6-201ENST00000231136 ERBB2P04626 1255 aa13.72□□□□□ -0.21
PCDHB6-201ENST00000231136 ITGB1P05556 798 aa13.72□□□□□ -0.21
PCDHB6-201ENST00000231136 ATF7P17544 494 aaPredicted RBP13.72□□□□□ -0.21
PCDHB6-201ENST00000231136 IFNAR2P48551 515 aa13.72□□□□□ -0.21
PCDHB6-201ENST00000231136 AP3M2P53677 418 aa13.72□□□□□ -0.21
PCDHB6-201ENST00000231136 CCDC137Q6PK04 289 aaKnown RBP13.72□□□□□ -0.21
PCDHB6-201ENST00000231136 MICALL1Q8N3F8 863 aa13.72□□□□□ -0.21
PCDHB6-201ENST00000231136 MDM1Q8TC05 714 aa13.72□□□□□ -0.21
PCDHB6-201ENST00000231136 CLEC4CQ8WTT0 213 aa13.72□□□□□ -0.21
PCDHB6-201ENST00000231136 LRRC45Q96CN5 670 aa13.72□□□□□ -0.21
PCDHB6-201ENST00000231136 BCO2Q9BYV7 579 aa13.72□□□□□ -0.21
PCDHB6-201ENST00000231136 TSPAN16Q9UKR8 245 aa13.72□□□□□ -0.21
PCDHB6-201ENST00000231136 C2CD2Q9Y426 696 aa13.72□□□□□ -0.21
PCDHB6-201ENST00000231136 CASP8AP2Q9UKL3 1982 aa13.71□□□□□ -0.21
PCDHB6-201ENST00000231136 MYO1FO00160 1098 aa13.71□□□□□ -0.21
PCDHB6-201ENST00000231136 B4GALT3O60512 393 aa13.71□□□□□ -0.21
PCDHB6-201ENST00000231136 RFC1P35251 1148 aaPredicted RBP13.71□□□□□ -0.21
PCDHB6-201ENST00000231136 PBX3P40426 434 aa13.71□□□□□ -0.21
PCDHB6-201ENST00000231136 GATMP50440 423 aa13.71□□□□□ -0.21
PCDHB6-201ENST00000231136 MAGOHP61326 146 aaKnown RBP13.71□□□□□ -0.21
PCDHB6-201ENST00000231136 ALS2CLQ60I27 953 aa13.71□□□□□ -0.21
PCDHB6-201ENST00000231136 ERICH1Q86X53 443 aa13.71□□□□□ -0.21
PCDHB6-201ENST00000231136 SCLYQ96I15 445 aa13.71□□□□□ -0.21
PCDHB6-201ENST00000231136 RHOBTB2Q9BYZ6 727 aa13.71□□□□□ -0.21
PCDHB6-201ENST00000231136 ARL5CA6NH57 179 aa13.71□□□□□ -0.22
PCDHB6-201ENST00000231136 DCDC2CA8MYV0 355 aa13.71□□□□□ -0.22
PCDHB6-201ENST00000231136 HOXD10P28358 340 aa13.71□□□□□ -0.22
PCDHB6-201ENST00000231136 AARSP49588 968 aaKnown RBP eCLIP13.71□□□□□ -0.22
PCDHB6-201ENST00000231136 BCAR1P56945 870 aa13.71□□□□□ -0.22
PCDHB6-201ENST00000231136 BPIFB4P59827 614 aa13.71□□□□□ -0.22
PCDHB6-201ENST00000231136 ZNF252P-AS1Q0IIN9 211 aa13.71□□□□□ -0.22
PCDHB6-201ENST00000231136 CDO1Q16878 200 aa13.71□□□□□ -0.22
PCDHB6-201ENST00000231136 FBXO47Q5MNV8 452 aa13.71□□□□□ -0.22
PCDHB6-201ENST00000231136 WSCD1Q658N2 575 aa13.71□□□□□ -0.22
PCDHB6-201ENST00000231136 RTN4RL1Q86UN2 441 aaPredicted RBP13.71□□□□□ -0.22
PCDHB6-201ENST00000231136 SCUBE3Q8IX30 993 aa13.71□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms