RNA–Protein interactions for RNA: ENST00000228827.7

GPN3-201, Transcript of GPN-loop GTPase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPN3, Length 1,468 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-201ENST00000228827 MDH1BQ5I0G3 518 aa15.21■□□□□ 0.03
GPN3-201ENST00000228827 FAM171BQ6P995 826 aa15.21■□□□□ 0.03
GPN3-201ENST00000228827 C4orf50Q6ZRC1 276 aa15.21■□□□□ 0.03
GPN3-201ENST00000228827 TMEM150AQ86TG1 271 aa15.21■□□□□ 0.03
GPN3-201ENST00000228827 SLC9A9Q8IVB4 645 aa15.21■□□□□ 0.03
GPN3-201ENST00000228827 MAB21L3Q8N8X9 362 aa15.21■□□□□ 0.03
GPN3-201ENST00000228827 TTC8Q8TAM2 541 aa15.21■□□□□ 0.03
GPN3-201ENST00000228827 CSGALNACT1Q8TDX6 532 aa15.21■□□□□ 0.03
GPN3-201ENST00000228827 ZFYVE19Q96K21 471 aa15.21■□□□□ 0.03
GPN3-201ENST00000228827 BCO2Q9BYV7 579 aa15.21■□□□□ 0.03
GPN3-201ENST00000228827 MAGEC2Q9UBF1 373 aaPredicted RBP15.21■□□□□ 0.03
GPN3-201ENST00000228827 NME7Q9Y5B8 376 aa15.21■□□□□ 0.03
GPN3-201ENST00000228827 PIAS3Q9Y6X2 628 aa15.21■□□□□ 0.03
GPN3-201ENST00000228827 GOLGA6L4A6NEF3 574 aa15.2■□□□□ 0.02
GPN3-201ENST00000228827 SHISA7A6NL88 538 aa15.2■□□□□ 0.02
GPN3-201ENST00000228827 SLC38A8A6NNN8 435 aa15.2■□□□□ 0.02
GPN3-201ENST00000228827 F11P03951 625 aa15.2■□□□□ 0.02
GPN3-201ENST00000228827 BDNFP23560 247 aa15.2■□□□□ 0.02
GPN3-201ENST00000228827 ATICP31939 592 aa15.2■□□□□ 0.02
GPN3-201ENST00000228827 NUCB2P80303 420 aa15.2■□□□□ 0.02
GPN3-201ENST00000228827 ZNF699Q32M78 642 aa15.2■□□□□ 0.02
GPN3-201ENST00000228827 CFAP221Q4G0U5 840 aa15.2■□□□□ 0.02
GPN3-201ENST00000228827 TXNDC8Q6A555 127 aa15.2■□□□□ 0.02
GPN3-201ENST00000228827 SCARA5Q6ZMJ2 495 aa15.2■□□□□ 0.02
GPN3-201ENST00000228827 C1orf210Q8IVY1 113 aa15.2■□□□□ 0.02
GPN3-201ENST00000228827 SYAP1Q96A49 352 aaPredicted RBP15.2■□□□□ 0.02
GPN3-201ENST00000228827 FUBP3Q96I24 572 aaKnown RBP eCLIP15.2■□□□□ 0.02
GPN3-201ENST00000228827 XYLT2Q9H1B5 865 aa15.2■□□□□ 0.02
GPN3-201ENST00000228827 DPEP3Q9H4B8 488 aa15.2■□□□□ 0.02
GPN3-201ENST00000228827 SPATA6Q9NWH7 488 aaPredicted RBP15.2■□□□□ 0.02
GPN3-201ENST00000228827 A8MXQ7 604 aa15.2■□□□□ 0.02
GPN3-201ENST00000228827 CHADO15335 359 aa15.2■□□□□ 0.02
GPN3-201ENST00000228827 GFRA3O60609 400 aa15.2■□□□□ 0.02
GPN3-201ENST00000228827 TACC1O75410 805 aa15.2■□□□□ 0.02
GPN3-201ENST00000228827 NOL4O94818 638 aa15.2■□□□□ 0.02
GPN3-201ENST00000228827 KIF20AO95235 890 aa15.2■□□□□ 0.02
GPN3-201ENST00000228827 VNN1O95497 513 aa15.2■□□□□ 0.02
GPN3-201ENST00000228827 C4BPAP04003 597 aaKnown RBP15.2■□□□□ 0.02
GPN3-201ENST00000228827 GRIK1P39086 918 aa15.2■□□□□ 0.02
GPN3-201ENST00000228827 NBL1P41271 181 aa15.2■□□□□ 0.02
GPN3-201ENST00000228827 RAP1GAPP47736 663 aa15.2■□□□□ 0.02
GPN3-201ENST00000228827 SOX9P48436 509 aa15.2■□□□□ 0.02
GPN3-201ENST00000228827 CDH8P55286 799 aa15.2■□□□□ 0.02
GPN3-201ENST00000228827 PNOCQ13519 176 aa15.2■□□□□ 0.02
GPN3-201ENST00000228827 NCOA4Q13772 614 aa15.2■□□□□ 0.02
GPN3-201ENST00000228827 CMTM8Q8IZV2 173 aa15.2■□□□□ 0.02
GPN3-201ENST00000228827 FAM3CQ92520 227 aa15.2■□□□□ 0.02
GPN3-201ENST00000228827 MRPS31Q92665 395 aaKnown RBP15.2■□□□□ 0.02
GPN3-201ENST00000228827 PCED1BQ96HM7 432 aa15.2■□□□□ 0.02
GPN3-201ENST00000228827 OSBPL6Q9BZF3 934 aa15.2■□□□□ 0.02
GPN3-201ENST00000228827 SMYD3Q9H7B4 428 aa15.2■□□□□ 0.02
GPN3-201ENST00000228827 TRPC7Q9HCX4 862 aa15.2■□□□□ 0.02
GPN3-201ENST00000228827 TRAF3IP3Q9Y228 551 aa15.2■□□□□ 0.02
GPN3-201ENST00000228827 FRMD4BQ9Y2L6 1034 aa15.2■□□□□ 0.02
GPN3-201ENST00000228827 MRPS17Q9Y2R5 130 aaKnown RBP15.2■□□□□ 0.02
GPN3-201ENST00000228827 ARNTLO00327 626 aa15.19■□□□□ 0.02
GPN3-201ENST00000228827 MAN2B1O00754 1011 aa15.19■□□□□ 0.02
GPN3-201ENST00000228827 STAU1O95793 577 aaKnown RBP15.19■□□□□ 0.02
GPN3-201ENST00000228827 NR2F2P24468 414 aa15.19■□□□□ 0.02
GPN3-201ENST00000228827 AVPR1AP37288 418 aa15.19■□□□□ 0.02
GPN3-201ENST00000228827 MAGEA11P43364 429 aa15.19■□□□□ 0.02
GPN3-201ENST00000228827 KPNA1P52294 538 aaPredicted RBP15.19■□□□□ 0.02
GPN3-201ENST00000228827 AP3M2P53677 418 aa15.19■□□□□ 0.02
GPN3-201ENST00000228827 CLDN10P78369 228 aa15.19■□□□□ 0.02
GPN3-201ENST00000228827 FCHO2Q0JRZ9 810 aa15.19■□□□□ 0.02
GPN3-201ENST00000228827 KCNB1Q14721 858 aa15.19■□□□□ 0.02
GPN3-201ENST00000228827 MAPRE1Q15691 268 aaKnown RBP15.19■□□□□ 0.02
GPN3-201ENST00000228827 SMYD4Q8IYR2 804 aaPredicted RBP15.19■□□□□ 0.02
GPN3-201ENST00000228827 TTC16Q8NEE8 873 aa15.19■□□□□ 0.02
GPN3-201ENST00000228827 MYCBPAPQ8TBZ2 947 aa15.19■□□□□ 0.02
GPN3-201ENST00000228827 BPIFB1Q8TDL5 484 aa15.19■□□□□ 0.02
GPN3-201ENST00000228827 NELL2Q99435 816 aa15.19■□□□□ 0.02
GPN3-201ENST00000228827 TRPV5Q9NQA5 729 aa15.19■□□□□ 0.02
GPN3-201ENST00000228827 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.19■□□□□ 0.022e-6■■■■■ 96.1
GPN3-201ENST00000228827 UXTQ9UBK9 157 aaPredicted RBP15.19■□□□□ 0.02
GPN3-201ENST00000228827 CCL26Q9Y258 94 aa15.19■□□□□ 0.02
GPN3-201ENST00000228827 R4GN57 208 aa15.19■□□□□ 0.02
GPN3-201ENST00000228827 TCHHQ07283 1943 aa15.18■□□□□ 0.02
GPN3-201ENST00000228827 NCAM2O15394 837 aa15.18■□□□□ 0.02
GPN3-201ENST00000228827 TADA3O75528 432 aa15.18■□□□□ 0.02
GPN3-201ENST00000228827 PTPN1P18031 435 aaKnown RBP15.18■□□□□ 0.02
GPN3-201ENST00000228827 CCNE1P24864 410 aa15.18■□□□□ 0.02
GPN3-201ENST00000228827 ZNF667Q5HYK9 610 aa15.18■□□□□ 0.02
GPN3-201ENST00000228827 ASCL5Q7RTU5 278 aa15.18■□□□□ 0.02
GPN3-201ENST00000228827 FMR1NBQ8N0W7 255 aaPredicted RBP15.18■□□□□ 0.02
GPN3-201ENST00000228827 TMC2Q8TDI7 906 aa15.18■□□□□ 0.02
GPN3-201ENST00000228827 TMEM174Q8WUU8 243 aa15.18■□□□□ 0.02
GPN3-201ENST00000228827 CCDC34Q96HJ3 373 aa15.18■□□□□ 0.02
GPN3-201ENST00000228827 OBP2AQ9NY56 170 aa15.18■□□□□ 0.02
GPN3-201ENST00000228827 PROB1E7EW31 1015 aa15.17■□□□□ 0.02
GPN3-201ENST00000228827 LAMTOR5O43504 91 aa15.17■□□□□ 0.02
GPN3-201ENST00000228827 AKAP3O75969 853 aa15.17■□□□□ 0.02
GPN3-201ENST00000228827 SP9P0CG40 484 aa15.17■□□□□ 0.02
GPN3-201ENST00000228827 TRIM49P0CI25 452 aa15.17■□□□□ 0.02
GPN3-201ENST00000228827 TRIM49CP0CI26 452 aa15.17■□□□□ 0.02
GPN3-201ENST00000228827 DDX6P26196 483 aaKnown RBP eCLIP15.17■□□□□ 0.02
GPN3-201ENST00000228827 ANXA13P27216 316 aa15.17■□□□□ 0.02
GPN3-201ENST00000228827 WEE1P30291 646 aa15.17■□□□□ 0.02
GPN3-201ENST00000228827 VAMP7P51809 220 aa15.17■□□□□ 0.02
GPN3-201ENST00000228827 TNK2Q07912 1038 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms