RNA–Protein interactions for RNA: ENST00000225576.7

TVP23C-201, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

TSL 1 (best) BASIC

Gene TVP23C, Length 1,527 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-201ENST00000225576 APBB2Q92870 758 aa17.74■□□□□ 0.43
TVP23C-201ENST00000225576 MCRS1Q96EZ8 462 aa17.74■□□□□ 0.43
TVP23C-201ENST00000225576 RNPC3Q96LT9 517 aaKnown RBP17.74■□□□□ 0.43
TVP23C-201ENST00000225576 MCEEQ96PE7 176 aa17.74■□□□□ 0.43
TVP23C-201ENST00000225576 NAP1L3Q99457 506 aaPredicted RBP17.74■□□□□ 0.43
TVP23C-201ENST00000225576 EPC1Q9H2F5 836 aa17.74■□□□□ 0.43
TVP23C-201ENST00000225576 RBM12Q9NTZ6 932 aaKnown RBP17.74■□□□□ 0.43
TVP23C-201ENST00000225576 TMEM161AQ9NX61 479 aa17.74■□□□□ 0.43
TVP23C-201ENST00000225576 KANSL3Q9P2N6 904 aa17.74■□□□□ 0.43
TVP23C-201ENST00000225576 INPP5FQ9Y2H2 1132 aa17.74■□□□□ 0.43
TVP23C-201ENST00000225576 TARSL2A2RTX5 802 aaKnown RBP17.73■□□□□ 0.43
TVP23C-201ENST00000225576 DCDC2CA8MYV0 355 aa17.73■□□□□ 0.43
TVP23C-201ENST00000225576 ENPP3O14638 875 aa17.73■□□□□ 0.43
TVP23C-201ENST00000225576 HCRTO43612 131 aa17.73■□□□□ 0.43
TVP23C-201ENST00000225576 GJB6O95452 261 aa17.73■□□□□ 0.43
TVP23C-201ENST00000225576 RHOXF2BP0C7M4 288 aa17.73■□□□□ 0.43
TVP23C-201ENST00000225576 KRT3P12035 628 aa17.73■□□□□ 0.43
TVP23C-201ENST00000225576 IBSPP21815 317 aaPredicted RBP17.73■□□□□ 0.43
TVP23C-201ENST00000225576 MARCKSL1P49006 195 aa17.73■□□□□ 0.43
TVP23C-201ENST00000225576 RWDD2BP57060 319 aa17.73■□□□□ 0.43
TVP23C-201ENST00000225576 RNASE9P60153 205 aaKnown RBP17.73■□□□□ 0.43
TVP23C-201ENST00000225576 PIGHQ14442 188 aaPredicted RBP17.73■□□□□ 0.43
TVP23C-201ENST00000225576 GLE1Q53GS7 698 aaKnown RBP17.73■□□□□ 0.43
TVP23C-201ENST00000225576 DCLRE1AQ6PJP8 1040 aa17.73■□□□□ 0.43
TVP23C-201ENST00000225576 NIPA2Q8N8Q9 360 aa17.73■□□□□ 0.43
TVP23C-201ENST00000225576 B3GALNT2Q8NCR0 500 aa17.73■□□□□ 0.43
TVP23C-201ENST00000225576 FNIP1Q8TF40 1166 aa17.73■□□□□ 0.43
TVP23C-201ENST00000225576 RHOXF2Q9BQY4 288 aa17.73■□□□□ 0.43
TVP23C-201ENST00000225576 PAAF1Q9BRP4 392 aa17.73■□□□□ 0.43
TVP23C-201ENST00000225576 SLC4A5Q9BY07 1137 aa17.73■□□□□ 0.43
TVP23C-201ENST00000225576 TJP2Q9UDY2 1190 aa17.73■□□□□ 0.43
TVP23C-201ENST00000225576 RAB21Q9UL25 225 aa17.73■□□□□ 0.43
TVP23C-201ENST00000225576 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.73■□□□□ 0.43
TVP23C-201ENST00000225576 CCDC188H7C350 402 aa17.72■□□□□ 0.43
TVP23C-201ENST00000225576 B3GAT3O94766 335 aa17.72■□□□□ 0.43
TVP23C-201ENST00000225576 PTPN1P18031 435 aaKnown RBP17.72■□□□□ 0.43
TVP23C-201ENST00000225576 BCAT1P54687 386 aa17.72■□□□□ 0.43
TVP23C-201ENST00000225576 TIGD5Q53EQ6 642 aa17.72■□□□□ 0.43
TVP23C-201ENST00000225576 NOMO2Q5JPE7 1267 aa17.72■□□□□ 0.43
TVP23C-201ENST00000225576 CLLU1OSQ5K130 101 aa17.72■□□□□ 0.43
TVP23C-201ENST00000225576 TMEM110Q86TL2 294 aa17.72■□□□□ 0.43
TVP23C-201ENST00000225576 URGCPQ8TCY9 931 aa17.72■□□□□ 0.43
TVP23C-201ENST00000225576 ARMC5Q96C12 935 aa17.72■□□□□ 0.43
TVP23C-201ENST00000225576 HNRNPABQ99729 332 aaKnown RBP17.72■□□□□ 0.43
TVP23C-201ENST00000225576 PLVAPQ9BX97 442 aa17.72■□□□□ 0.43
TVP23C-201ENST00000225576 ARGLU1Q9NWB6 273 aaPredicted RBP17.72■□□□□ 0.43
TVP23C-201ENST00000225576 GOLGA8SH3BPF8 625 aa17.72■□□□□ 0.43
TVP23C-201ENST00000225576 PSTPIP1O43586 416 aa17.72■□□□□ 0.43
TVP23C-201ENST00000225576 FGGP02679 453 aa17.72■□□□□ 0.43
TVP23C-201ENST00000225576 RPL34P49207 117 aaKnown RBP17.72■□□□□ 0.43
TVP23C-201ENST00000225576 ATN1P54259 1190 aaPredicted RBP17.72■□□□□ 0.43
TVP23C-201ENST00000225576 PDE4CQ08493 712 aa17.72■□□□□ 0.43
TVP23C-201ENST00000225576 DSC1Q08554 894 aa17.72■□□□□ 0.43
TVP23C-201ENST00000225576 FAAP100Q0VG06 881 aa17.72■□□□□ 0.43
TVP23C-201ENST00000225576 BST2Q10589 180 aaKnown RBP17.72■□□□□ 0.43
TVP23C-201ENST00000225576 SEL1L2Q5TEA6 688 aa17.72■□□□□ 0.43
TVP23C-201ENST00000225576 PMF1Q6P1K2 205 aa17.72■□□□□ 0.43
TVP23C-201ENST00000225576 FBXO38Q6PIJ6 1188 aa17.72■□□□□ 0.43
TVP23C-201ENST00000225576 CD300LGQ6UXG3 332 aa17.72■□□□□ 0.43
TVP23C-201ENST00000225576 RHOT1Q8IXI2 618 aa17.72■□□□□ 0.43
TVP23C-201ENST00000225576 LPIN3Q9BQK8 851 aa17.72■□□□□ 0.43
TVP23C-201ENST00000225576 HIPK3Q9H422 1215 aa17.72■□□□□ 0.43
TVP23C-201ENST00000225576 CYLDQ9NQC7 956 aa17.72■□□□□ 0.43
TVP23C-201ENST00000225576 ST7Q9NRC1 585 aa17.72■□□□□ 0.43
TVP23C-201ENST00000225576 DDX43Q9NXZ2 648 aaKnown RBP17.72■□□□□ 0.43
TVP23C-201ENST00000225576 ARHGEF37A1IGU5 675 aa17.71■□□□□ 0.43
TVP23C-201ENST00000225576 M0QZQ0 153 aa17.71■□□□□ 0.43
TVP23C-201ENST00000225576 KRIT1O00522 736 aa17.71■□□□□ 0.43
TVP23C-201ENST00000225576 CXCL10P02778 98 aa17.71■□□□□ 0.43
TVP23C-201ENST00000225576 CYP11A1P05108 521 aa17.71■□□□□ 0.43
TVP23C-201ENST00000225576 PYGMP11217 842 aa17.71■□□□□ 0.43
TVP23C-201ENST00000225576 ODC1P11926 461 aa17.71■□□□□ 0.43
TVP23C-201ENST00000225576 CCDC130P13994 396 aa17.71■□□□□ 0.43
TVP23C-201ENST00000225576 RFC1P35251 1148 aaPredicted RBP17.71■□□□□ 0.43
TVP23C-201ENST00000225576 OGDHQ02218 1023 aa17.71■□□□□ 0.43
TVP23C-201ENST00000225576 ZNF252P-AS1Q0IIN9 211 aa17.71■□□□□ 0.43
TVP23C-201ENST00000225576 ZNF211Q13398 564 aaPredicted RBP17.71■□□□□ 0.43
TVP23C-201ENST00000225576 PKN2Q16513 984 aaKnown RBP17.71■□□□□ 0.43
TVP23C-201ENST00000225576 LONRF2Q1L5Z9 754 aa17.71■□□□□ 0.43
TVP23C-201ENST00000225576 LRRC38Q5VT99 294 aa17.71■□□□□ 0.43
TVP23C-201ENST00000225576 WDR93Q6P2C0 686 aa17.71■□□□□ 0.43
TVP23C-201ENST00000225576 ZDHHC17Q8IUH5 632 aa17.71■□□□□ 0.43
TVP23C-201ENST00000225576 RUBCNQ92622 972 aa17.71■□□□□ 0.43
TVP23C-201ENST00000225576 DSEQ9UL01 958 aa17.71■□□□□ 0.43
TVP23C-201ENST00000225576 E5RJQ4 531 aa17.7■□□□□ 0.42
TVP23C-201ENST00000225576 MCM3P25205 808 aa17.7■□□□□ 0.42
TVP23C-201ENST00000225576 ADORA2BP29275 332 aa17.7■□□□□ 0.42
TVP23C-201ENST00000225576 TLE2Q04725 743 aa17.7■□□□□ 0.42
TVP23C-201ENST00000225576 ACAP1Q15027 740 aa17.7■□□□□ 0.42
TVP23C-201ENST00000225576 BRD3Q15059 726 aa17.7■□□□□ 0.42
TVP23C-201ENST00000225576 METTL23Q86XA0 190 aa17.7■□□□□ 0.42
TVP23C-201ENST00000225576 ANKLE1Q8NAG6 615 aa17.7■□□□□ 0.42
TVP23C-201ENST00000225576 SLC2A14Q8TDB8 520 aa17.7■□□□□ 0.42
TVP23C-201ENST00000225576 HSFY1Q96LI6 401 aa17.7■□□□□ 0.42
TVP23C-201ENST00000225576 PNKPQ96T60 521 aa17.7■□□□□ 0.42
TVP23C-201ENST00000225576 LRRC1Q9BTT6 524 aa17.7■□□□□ 0.42
TVP23C-201ENST00000225576 METTL5Q9NRN9 209 aaKnown RBP17.7■□□□□ 0.42
TVP23C-201ENST00000225576 CDH9Q9ULB4 789 aa17.7■□□□□ 0.42
TVP23C-201ENST00000225576 PCDHB7Q9Y5E2 793 aa17.7■□□□□ 0.42
TVP23C-201ENST00000225576 HTTP42858 3142 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms