RNA–Protein interactions for RNA: ENST00000216605.12

MTHFD1-201, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MTHFD1, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-201ENST00000216605 SMYD3Q9H7B4 428 aa9.39□□□□□ -0.91
MTHFD1-201ENST00000216605 ACTR5Q9H9F9 607 aaPredicted RBP9.39□□□□□ -0.91
MTHFD1-201ENST00000216605 SPATA7Q9P0W8 599 aa9.39□□□□□ -0.91
MTHFD1-201ENST00000216605 SCINQ9Y6U3 715 aa9.39□□□□□ -0.91
MTHFD1-201ENST00000216605 E7EVH7 732 aa9.39□□□□□ -0.91
MTHFD1-201ENST00000216605 PGK1P00558 417 aa9.39□□□□□ -0.91
MTHFD1-201ENST00000216605 PYGMP11217 842 aa9.39□□□□□ -0.91
MTHFD1-201ENST00000216605 RBP5P82980 135 aa9.39□□□□□ -0.91
MTHFD1-201ENST00000216605 DR1Q01658 176 aa9.39□□□□□ -0.91
MTHFD1-201ENST00000216605 DEUP1Q05D60 604 aa9.39□□□□□ -0.91
MTHFD1-201ENST00000216605 POU5F1BQ06416 359 aa9.39□□□□□ -0.91
MTHFD1-201ENST00000216605 TRADDQ15628 312 aa9.39□□□□□ -0.91
MTHFD1-201ENST00000216605 KYAT1Q16773 422 aa9.39□□□□□ -0.91
MTHFD1-201ENST00000216605 WLSQ5T9L3 541 aa9.39□□□□□ -0.91
MTHFD1-201ENST00000216605 MFSD14CQ5VZR4 134 aa9.39□□□□□ -0.91
MTHFD1-201ENST00000216605 TWF2Q6IBS0 349 aaKnown RBP9.39□□□□□ -0.91
MTHFD1-201ENST00000216605 MYCBPAPQ8TBZ2 947 aa9.39□□□□□ -0.91
MTHFD1-201ENST00000216605 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.39□□□□□ -0.91
MTHFD1-201ENST00000216605 SPDL1Q96EA4 605 aa9.39□□□□□ -0.91
MTHFD1-201ENST00000216605 TRIM51Q9BSJ1 452 aa9.39□□□□□ -0.91
MTHFD1-201ENST00000216605 HEMGNQ9BXL5 484 aa9.39□□□□□ -0.91
MTHFD1-201ENST00000216605 PARVAQ9NVD7 372 aa9.39□□□□□ -0.91
MTHFD1-201ENST00000216605 SNX9Q9Y5X1 595 aa9.39□□□□□ -0.91
MTHFD1-201ENST00000216605 PLXNA1Q9UIW2 1896 aa9.39□□□□□ -0.91
MTHFD1-201ENST00000216605 DYTNA2CJ06 578 aa9.38□□□□□ -0.91
MTHFD1-201ENST00000216605 PIK3R2O00459 728 aa9.38□□□□□ -0.91
MTHFD1-201ENST00000216605 DAPK3O43293 454 aa9.38□□□□□ -0.91
MTHFD1-201ENST00000216605 CTSHP09668 335 aa9.38□□□□□ -0.91
MTHFD1-201ENST00000216605 ZNF865P0CJ78 1059 aaPredicted RBP9.38□□□□□ -0.91
MTHFD1-201ENST00000216605 GNAT1P11488 350 aa9.38□□□□□ -0.91
MTHFD1-201ENST00000216605 AKR1A1P14550 325 aa9.38□□□□□ -0.91
MTHFD1-201ENST00000216605 CENPCQ03188 943 aa9.38□□□□□ -0.91
MTHFD1-201ENST00000216605 CLUL1Q15846 466 aa9.38□□□□□ -0.91
MTHFD1-201ENST00000216605 AMHR2Q16671 573 aa9.38□□□□□ -0.91
MTHFD1-201ENST00000216605 FAM187BQ17R55 369 aa9.38□□□□□ -0.91
MTHFD1-201ENST00000216605 CEP85LQ5SZL2 805 aa9.38□□□□□ -0.91
MTHFD1-201ENST00000216605 DCAF12L1Q5VU92 463 aa9.38□□□□□ -0.91
MTHFD1-201ENST00000216605 KAZNQ674X7 775 aa9.38□□□□□ -0.91
MTHFD1-201ENST00000216605 CYP4F22Q6NT55 531 aa9.38□□□□□ -0.91
MTHFD1-201ENST00000216605 SLC27A1Q6PCB7 646 aa9.38□□□□□ -0.91
MTHFD1-201ENST00000216605 C17orf99Q6UX52 265 aa9.38□□□□□ -0.91
MTHFD1-201ENST00000216605 CASKIN2Q8WXE0 1202 aa9.38□□□□□ -0.91
MTHFD1-201ENST00000216605 MCEEQ96PE7 176 aa9.38□□□□□ -0.91
MTHFD1-201ENST00000216605 KATNAL1Q9BW62 490 aa9.38□□□□□ -0.91
MTHFD1-201ENST00000216605 EIF2AQ9BY44 585 aaKnown RBP9.38□□□□□ -0.91
MTHFD1-201ENST00000216605 RASAL2Q9UJF2 1139 aa9.38□□□□□ -0.91
MTHFD1-201ENST00000216605 GNEQ9Y223 722 aaKnown RBP9.38□□□□□ -0.91
MTHFD1-201ENST00000216605 NR2E1Q9Y466 385 aa9.38□□□□□ -0.91
MTHFD1-201ENST00000216605 MROH7Q68CQ1 1323 aa9.38□□□□□ -0.91
MTHFD1-201ENST00000216605 CFAP69A5D8W1 941 aa9.38□□□□□ -0.91
MTHFD1-201ENST00000216605 ENO4A6NNW6 628 aa9.38□□□□□ -0.91
MTHFD1-201ENST00000216605 M0QYV0 167 aa9.38□□□□□ -0.91
MTHFD1-201ENST00000216605 F2P00734 622 aa9.38□□□□□ -0.91
MTHFD1-201ENST00000216605 CYP1A1P04798 512 aaPredicted RBP9.38□□□□□ -0.91
MTHFD1-201ENST00000216605 CALB1P05937 261 aa9.38□□□□□ -0.91
MTHFD1-201ENST00000216605 NAT2P11245 290 aa9.38□□□□□ -0.91
MTHFD1-201ENST00000216605 EIF4BP23588 611 aaKnown RBP9.38□□□□□ -0.91
MTHFD1-201ENST00000216605 FCGRTP55899 365 aa9.38□□□□□ -0.91
MTHFD1-201ENST00000216605 CDC42EP1Q00587 391 aa9.38□□□□□ -0.91
MTHFD1-201ENST00000216605 PPP1R7Q15435 360 aa9.38□□□□□ -0.91
MTHFD1-201ENST00000216605 CXCL17Q6UXB2 119 aa9.38□□□□□ -0.91
MTHFD1-201ENST00000216605 SDCCAG8Q86SQ7 713 aaPredicted RBP9.38□□□□□ -0.91
MTHFD1-201ENST00000216605 KCNN1Q92952 543 aa9.38□□□□□ -0.91
MTHFD1-201ENST00000216605 ZIC5Q96T25 663 aa9.38□□□□□ -0.91
MTHFD1-201ENST00000216605 KLHL11Q9NVR0 708 aa9.38□□□□□ -0.91
MTHFD1-201ENST00000216605 SIX4Q9UIU6 781 aa9.38□□□□□ -0.91
MTHFD1-201ENST00000216605 SLC10A3P09131 477 aa9.38□□□□□ -0.91
MTHFD1-201ENST00000216605 ATF7P17544 494 aaPredicted RBP9.38□□□□□ -0.91
MTHFD1-201ENST00000216605 ASPAP45381 313 aa9.38□□□□□ -0.91
MTHFD1-201ENST00000216605 TRPC1P48995 793 aa9.38□□□□□ -0.91
MTHFD1-201ENST00000216605 SEC24CP53992 1094 aa9.38□□□□□ -0.91
MTHFD1-201ENST00000216605 DCAF4L1Q3SXM0 396 aa9.38□□□□□ -0.91
MTHFD1-201ENST00000216605 CCDC13Q8IYE1 715 aa9.38□□□□□ -0.91
MTHFD1-201ENST00000216605 RASGEF1CQ8N431 466 aa9.38□□□□□ -0.91
MTHFD1-201ENST00000216605 RNF169Q8NCN4 708 aa9.38□□□□□ -0.91
MTHFD1-201ENST00000216605 OR6B3Q8NGW1 331 aa9.38□□□□□ -0.91
MTHFD1-201ENST00000216605 UBA3Q8TBC4 463 aa9.38□□□□□ -0.91
MTHFD1-201ENST00000216605 FEZF2Q8TBJ5 459 aa9.38□□□□□ -0.91
MTHFD1-201ENST00000216605 TFAP2BQ92481 460 aa9.38□□□□□ -0.91
MTHFD1-201ENST00000216605 ARHGAP39Q9C0H5 1083 aa9.38□□□□□ -0.91
MTHFD1-201ENST00000216605 RAB17Q9H0T7 212 aa9.38□□□□□ -0.91
MTHFD1-201ENST00000216605 NXF3Q9H4D5 531 aaKnown RBP9.38□□□□□ -0.91
MTHFD1-201ENST00000216605 SLITRK6Q9H5Y7 841 aa9.38□□□□□ -0.91
MTHFD1-201ENST00000216605 hCG_2014768A0A024R1R8 64 aa9.37□□□□□ -0.91
MTHFD1-201ENST00000216605 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.37□□□□□ -0.91
MTHFD1-201ENST00000216605 RASSF9O75901 435 aa9.37□□□□□ -0.91
MTHFD1-201ENST00000216605 MYZAPP0CAP1 466 aa9.37□□□□□ -0.91
MTHFD1-201ENST00000216605 KCNJ1P48048 391 aa9.37□□□□□ -0.91
MTHFD1-201ENST00000216605 HADHBP55084 474 aaKnown RBP9.37□□□□□ -0.91
MTHFD1-201ENST00000216605 TAGLNQ01995 201 aaKnown RBP9.37□□□□□ -0.91
MTHFD1-201ENST00000216605 MAMLD1Q13495 774 aa9.37□□□□□ -0.91
MTHFD1-201ENST00000216605 SGO2Q562F6 1265 aa9.37□□□□□ -0.91
MTHFD1-201ENST00000216605 PPP1R2P3Q6NXS1 205 aa9.37□□□□□ -0.91
MTHFD1-201ENST00000216605 MON1BQ7L1V2 547 aa9.37□□□□□ -0.91
MTHFD1-201ENST00000216605 BEST2Q8NFU1 509 aa9.37□□□□□ -0.91
MTHFD1-201ENST00000216605 UBLCP1Q8WVY7 318 aaPredicted RBP9.37□□□□□ -0.91
MTHFD1-201ENST00000216605 C1orf54Q8WWF1 131 aa9.37□□□□□ -0.91
MTHFD1-201ENST00000216605 C18orf8Q96DM3 657 aa9.37□□□□□ -0.91
MTHFD1-201ENST00000216605 XYLT2Q9H1B5 865 aa9.37□□□□□ -0.91
MTHFD1-201ENST00000216605 CD248Q9HCU0 757 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms