RNA–Protein interactions for RNA: ENST00000216484.6

SPTLC2-201, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC2, Length 8,170 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-201ENST00000216484 BTN3A2P78410 334 aa15.16■□□□□ 0.02
SPTLC2-201ENST00000216484 UBE3CQ15386 1083 aa15.16■□□□□ 0.02
SPTLC2-201ENST00000216484 ENOSF1Q7L5Y1 443 aa15.16■□□□□ 0.02
SPTLC2-201ENST00000216484 SPATA4Q8NEY3 305 aa15.16■□□□□ 0.02
SPTLC2-201ENST00000216484 MPP4Q96JB8 637 aa15.16■□□□□ 0.02
SPTLC2-201ENST00000216484 TMEM138Q9NPI0 162 aa15.16■□□□□ 0.02
SPTLC2-201ENST00000216484 TRPC4Q9UBN4 977 aa15.16■□□□□ 0.02
SPTLC2-201ENST00000216484 STAT3P40763 770 aa15.16■□□□□ 0.02
SPTLC2-201ENST00000216484 TRAP1Q12931 704 aaKnown RBP15.16■□□□□ 0.02
SPTLC2-201ENST00000216484 LEMD2Q8NC56 503 aa15.16■□□□□ 0.02
SPTLC2-201ENST00000216484 RUBCNQ92622 972 aa15.16■□□□□ 0.02
SPTLC2-201ENST00000216484 SENP7Q9BQF6 1050 aa15.16■□□□□ 0.02
SPTLC2-201ENST00000216484 MIEF1Q9NQG6 463 aa15.16■□□□□ 0.02
SPTLC2-201ENST00000216484 HLA-DQA2P01906 255 aa15.16■□□□□ 0.02
SPTLC2-201ENST00000216484 TGFBR2P37173 567 aa15.16■□□□□ 0.02
SPTLC2-201ENST00000216484 ZCCHC8Q6NZY4 707 aaKnown RBP15.16■□□□□ 0.02
SPTLC2-201ENST00000216484 BHMTQ93088 406 aa15.16■□□□□ 0.02
SPTLC2-201ENST00000216484 MED15Q96RN5 788 aa15.16■□□□□ 0.02
SPTLC2-201ENST00000216484 POLD4Q9HCU8 107 aa15.16■□□□□ 0.02
SPTLC2-201ENST00000216484 ATAD3AQ9NVI7 634 aa15.16■□□□□ 0.02
SPTLC2-201ENST00000216484 PLXNC1O60486 1568 aa15.15■□□□□ 0.02
SPTLC2-201ENST00000216484 TIMM44O43615 452 aa15.15■□□□□ 0.02
SPTLC2-201ENST00000216484 FAM20BO75063 409 aa15.15■□□□□ 0.02
SPTLC2-201ENST00000216484 PDE8BO95263 885 aa15.15■□□□□ 0.02
SPTLC2-201ENST00000216484 PAICSP22234 425 aaKnown RBP15.15■□□□□ 0.02
SPTLC2-201ENST00000216484 CASP1P29466 404 aa15.15■□□□□ 0.02
SPTLC2-201ENST00000216484 GRK3P35626 688 aa15.15■□□□□ 0.02
SPTLC2-201ENST00000216484 CYLDQ9NQC7 956 aa15.15■□□□□ 0.02
SPTLC2-201ENST00000216484 OASLQ15646 514 aaKnown RBP15.15■□□□□ 0.02
SPTLC2-201ENST00000216484 SMTNL2Q2TAL5 461 aa15.15■□□□□ 0.02
SPTLC2-201ENST00000216484 POTEGQ6S5H5 508 aa15.15■□□□□ 0.02
SPTLC2-201ENST00000216484 GOLPH3Q9H4A6 298 aa15.15■□□□□ 0.02
SPTLC2-201ENST00000216484 FAM83BQ5T0W9 1011 aa15.15■□□□□ 0.02
SPTLC2-201ENST00000216484 CDK20Q8IZL9 346 aa15.15■□□□□ 0.02
SPTLC2-201ENST00000216484 GRAP2O75791 330 aa15.15■□□□□ 0.02
SPTLC2-201ENST00000216484 NUDT14O95848 222 aa15.15■□□□□ 0.02
SPTLC2-201ENST00000216484 ACADSP16219 412 aa15.15■□□□□ 0.02
SPTLC2-201ENST00000216484 SLC1A1P43005 524 aa15.15■□□□□ 0.02
SPTLC2-201ENST00000216484 QARSP47897 775 aaKnown RBP15.15■□□□□ 0.02
SPTLC2-201ENST00000216484 SWSAP1Q6NVH7 229 aa15.15■□□□□ 0.02
SPTLC2-201ENST00000216484 PJA1Q8NG27 643 aa15.15■□□□□ 0.02
SPTLC2-201ENST00000216484 ZNF671Q8TAW3 534 aa15.15■□□□□ 0.02
SPTLC2-201ENST00000216484 CATSPERBQ9H7T0 1116 aa15.15■□□□□ 0.02
SPTLC2-201ENST00000216484 LEMD3Q9Y2U8 911 aa15.15■□□□□ 0.02
SPTLC2-201ENST00000216484 GCC2Q8IWJ2 1684 aa15.15■□□□□ 0.02
SPTLC2-201ENST00000216484 LRRC14BA6NHZ5 514 aa15.15■□□□□ 0.02
SPTLC2-201ENST00000216484 PHF2O75151 1096 aa15.15■□□□□ 0.02
SPTLC2-201ENST00000216484 PDHA2P29803 388 aa15.15■□□□□ 0.02
SPTLC2-201ENST00000216484 PBLDP30039 288 aaPredicted RBP15.15■□□□□ 0.02
SPTLC2-201ENST00000216484 PEX5P50542 639 aa15.15■□□□□ 0.02
SPTLC2-201ENST00000216484 PIGHQ14442 188 aaPredicted RBP15.15■□□□□ 0.02
SPTLC2-201ENST00000216484 EFL1Q7Z2Z2 1120 aaKnown RBP15.15■□□□□ 0.02
SPTLC2-201ENST00000216484 EAF2Q96CJ1 260 aaPredicted RBP15.15■□□□□ 0.02
SPTLC2-201ENST00000216484 SEPT5Q99719 369 aaPredicted RBP15.15■□□□□ 0.02
SPTLC2-201ENST00000216484 CCSER1Q9C0I3 900 aa15.15■□□□□ 0.02
SPTLC2-201ENST00000216484 ARMC7Q9H6L4 198 aa15.15■□□□□ 0.02
SPTLC2-201ENST00000216484 ERBB3P21860 1342 aa15.15■□□□□ 0.02
SPTLC2-201ENST00000216484 FAM220BPB1ANY3 271 aa15.15■□□□□ 0.02
SPTLC2-201ENST00000216484 EEF2KO00418 725 aaKnown RBP15.15■□□□□ 0.02
SPTLC2-201ENST00000216484 SSNA1O43805 119 aa15.15■□□□□ 0.02
SPTLC2-201ENST00000216484 PPP1R37O75864 691 aa15.15■□□□□ 0.02
SPTLC2-201ENST00000216484 ABCB1P08183 1280 aaPredicted RBP15.15■□□□□ 0.02
SPTLC2-201ENST00000216484 CNPP09543 421 aaKnown RBP15.15■□□□□ 0.02
SPTLC2-201ENST00000216484 TSHZ1Q6ZSZ6 1077 aa15.15■□□□□ 0.02
SPTLC2-201ENST00000216484 GPRASP2Q96D09 838 aa15.15■□□□□ 0.02
SPTLC2-201ENST00000216484 DYNLL2Q96FJ2 89 aa15.15■□□□□ 0.02
SPTLC2-201ENST00000216484 MED8Q96G25 268 aa15.15■□□□□ 0.02
SPTLC2-201ENST00000216484 COPG2Q9UBF2 871 aa15.15■□□□□ 0.02
SPTLC2-201ENST00000216484 AGO2Q9UKV8 859 aaKnown RBP15.15■□□□□ 0.02
SPTLC2-201ENST00000216484 CPSF4O95639 269 aaKnown RBP15.14■□□□□ 0.01
SPTLC2-201ENST00000216484 AGAP9Q5VTM2 703 aa15.14■□□□□ 0.01
SPTLC2-201ENST00000216484 MOV10L1Q9BXT6 1211 aaKnown RBP15.14■□□□□ 0.01
SPTLC2-201ENST00000216484 ILKAPQ9H0C8 392 aaPredicted RBP15.14■□□□□ 0.01
SPTLC2-201ENST00000216484 UBA2Q9UBT2 640 aaPredicted RBP15.14■□□□□ 0.01
SPTLC2-201ENST00000216484 TMEM120BA0PK00 339 aa15.14■□□□□ 0.01
SPTLC2-201ENST00000216484 NR5A2O00482 541 aa15.14■□□□□ 0.01
SPTLC2-201ENST00000216484 TRIM66O15016 1216 aa15.14■□□□□ 0.01
SPTLC2-201ENST00000216484 TNFRSF21O75509 655 aa15.14■□□□□ 0.01
SPTLC2-201ENST00000216484 SOAT2O75908 522 aa15.14■□□□□ 0.01
SPTLC2-201ENST00000216484 RGS7P49802 495 aa15.14■□□□□ 0.01
SPTLC2-201ENST00000216484 CCNG1P51959 295 aa15.14■□□□□ 0.01
SPTLC2-201ENST00000216484 STX5Q13190 355 aa15.14■□□□□ 0.01
SPTLC2-201ENST00000216484 PLCL1Q15111 1095 aa15.14■□□□□ 0.01
SPTLC2-201ENST00000216484 CCDC185Q8N715 623 aa15.14■□□□□ 0.01
SPTLC2-201ENST00000216484 SLC35G2Q8TBE7 412 aa15.14■□□□□ 0.01
SPTLC2-201ENST00000216484 RFFLQ8WZ73 363 aa15.14■□□□□ 0.01
SPTLC2-201ENST00000216484 TLR7Q9NYK1 1049 aaKnown RBP15.14■□□□□ 0.01
SPTLC2-201ENST00000216484 SH3BP4Q9P0V3 963 aa15.14■□□□□ 0.01
SPTLC2-201ENST00000216484 DUOX2Q9NRD8 1548 aa15.14■□□□□ 0.01
SPTLC2-201ENST00000216484 PRPF3O43395 683 aaKnown RBP15.14■□□□□ 0.01
SPTLC2-201ENST00000216484 PDGFRBP09619 1106 aa15.14■□□□□ 0.01
SPTLC2-201ENST00000216484 SCRN3Q0VDG4 424 aa15.14■□□□□ 0.01
SPTLC2-201ENST00000216484 CD248Q9HCU0 757 aa15.14■□□□□ 0.01
SPTLC2-201ENST00000216484 ZBTB22O15209 634 aa15.14■□□□□ 0.01
SPTLC2-201ENST00000216484 TRAPPC3O43617 180 aa15.14■□□□□ 0.01
SPTLC2-201ENST00000216484 SKAP2O75563 359 aaPredicted RBP15.14■□□□□ 0.01
SPTLC2-201ENST00000216484 NANOGNBQ7Z5D8 188 aa15.14■□□□□ 0.01
SPTLC2-201ENST00000216484 ZNF589Q86UQ0 364 aaPredicted RBP15.14■□□□□ 0.01
SPTLC2-201ENST00000216484 C8orf4Q9NR00 106 aa15.14■□□□□ 0.01
SPTLC2-201ENST00000216484 CRLS1Q9UJA2 301 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms