RNA–Protein interactions for RNA: ENST00000215829.7

SNRPD3-201, Transcript of small nuclear ribonucleoprotein D3 polypeptide, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPD3, Length 1,763 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD3-201ENST00000215829 UVRAGQ9P2Y5 699 aa16.88■□□□□ 0.29
SNRPD3-201ENST00000215829 ZMYND8Q9ULU4 1186 aaPredicted RBP16.88■□□□□ 0.29
SNRPD3-201ENST00000215829 PCDHGC5Q9Y5F6 944 aa16.88■□□□□ 0.29
SNRPD3-201ENST00000215829 SF3B1O75533 1304 aaKnown RBP eCLIP16.88■□□□□ 0.29
SNRPD3-201ENST00000215829 MYH10P35580 1976 aa16.87■□□□□ 0.29
SNRPD3-201ENST00000215829 MYBPHLA2RUH7 354 aa16.87■□□□□ 0.29
SNRPD3-201ENST00000215829 FANCGO15287 622 aa16.87■□□□□ 0.29
SNRPD3-201ENST00000215829 ATMINO43313 823 aaPredicted RBP16.87■□□□□ 0.29
SNRPD3-201ENST00000215829 SETSIPP0DME0 302 aa16.87■□□□□ 0.29
SNRPD3-201ENST00000215829 ADORA2BP29275 332 aa16.87■□□□□ 0.29
SNRPD3-201ENST00000215829 CASQ1P31415 396 aa16.87■□□□□ 0.29
SNRPD3-201ENST00000215829 HADHBP55084 474 aaKnown RBP16.87■□□□□ 0.29
SNRPD3-201ENST00000215829 MDH1BQ5I0G3 518 aa16.87■□□□□ 0.29
SNRPD3-201ENST00000215829 FAM171A1Q5VUB5 890 aa16.87■□□□□ 0.29
SNRPD3-201ENST00000215829 FUT10Q6P4F1 479 aa16.87■□□□□ 0.29
SNRPD3-201ENST00000215829 FAM171BQ6P995 826 aa16.87■□□□□ 0.29
SNRPD3-201ENST00000215829 TMEM173Q86WV6 379 aaPredicted RBP16.87■□□□□ 0.29
SNRPD3-201ENST00000215829 FUKQ8N0W3 1084 aa16.87■□□□□ 0.29
SNRPD3-201ENST00000215829 TPCN2Q8NHX9 752 aa16.87■□□□□ 0.29
SNRPD3-201ENST00000215829 MYCBPAPQ8TBZ2 947 aa16.87■□□□□ 0.29
SNRPD3-201ENST00000215829 HERVK_113Q902F9 699 aa16.87■□□□□ 0.29
SNRPD3-201ENST00000215829 DPF3Q92784 378 aa16.87■□□□□ 0.29
SNRPD3-201ENST00000215829 YME1L1Q96TA2 773 aa16.87■□□□□ 0.29
SNRPD3-201ENST00000215829 COG5Q9UP83 839 aa16.87■□□□□ 0.29
SNRPD3-201ENST00000215829 PTPRSQ13332 1948 aa16.87■□□□□ 0.29
SNRPD3-201ENST00000215829 MTA2O94776 668 aa16.87■□□□□ 0.29
SNRPD3-201ENST00000215829 FGFR3P22607 806 aa16.87■□□□□ 0.29
SNRPD3-201ENST00000215829 BCAT1P54687 386 aa16.87■□□□□ 0.29
SNRPD3-201ENST00000215829 PLCB3Q01970 1234 aa16.87■□□□□ 0.29
SNRPD3-201ENST00000215829 PDCLQ13371 301 aa16.87■□□□□ 0.29
SNRPD3-201ENST00000215829 PTPN20Q4JDL3 420 aa16.87■□□□□ 0.29
SNRPD3-201ENST00000215829 INTS6LQ5JSJ4 861 aaKnown RBP16.87■□□□□ 0.29
SNRPD3-201ENST00000215829 SPOUT1Q5T280 376 aaKnown RBP16.87■□□□□ 0.29
SNRPD3-201ENST00000215829 PAQR9Q6ZVX9 377 aa16.87■□□□□ 0.29
SNRPD3-201ENST00000215829 MSANTD4Q8NCY6 345 aa16.87■□□□□ 0.29
SNRPD3-201ENST00000215829 OR10T2Q8NGX3 314 aa16.87■□□□□ 0.29
SNRPD3-201ENST00000215829 SLC35F5Q8WV83 523 aa16.87■□□□□ 0.29
SNRPD3-201ENST00000215829 CPXM1Q96SM3 734 aa16.87■□□□□ 0.29
SNRPD3-201ENST00000215829 LBHD1Q9BQE6 289 aaPredicted RBP16.87■□□□□ 0.29
SNRPD3-201ENST00000215829 NUP85Q9BW27 656 aa16.87■□□□□ 0.29
SNRPD3-201ENST00000215829 CXXC1Q9P0U4 656 aaPredicted RBP16.87■□□□□ 0.29
SNRPD3-201ENST00000215829 CHORDC1Q9UHD1 332 aaPredicted RBP16.87■□□□□ 0.29
SNRPD3-201ENST00000215829 GRID2IPA4D2P6 1211 aa16.86■□□□□ 0.29
SNRPD3-201ENST00000215829 PALMO75781 387 aa16.86■□□□□ 0.29
SNRPD3-201ENST00000215829 CAPN15O75808 1086 aa16.86■□□□□ 0.29
SNRPD3-201ENST00000215829 GJB5O95377 273 aa16.86■□□□□ 0.29
SNRPD3-201ENST00000215829 GABRB2P47870 512 aa16.86■□□□□ 0.29
SNRPD3-201ENST00000215829 PDE4CQ08493 712 aa16.86■□□□□ 0.29
SNRPD3-201ENST00000215829 BST2Q10589 180 aaKnown RBP16.86■□□□□ 0.29
SNRPD3-201ENST00000215829 MRPL58Q14197 206 aaKnown RBP16.86■□□□□ 0.29
SNRPD3-201ENST00000215829 CCDC142Q17RM4 750 aa16.86■□□□□ 0.29
SNRPD3-201ENST00000215829 VARS2Q5ST30 1063 aaKnown RBP16.86■□□□□ 0.29
SNRPD3-201ENST00000215829 PLEKHA7Q6IQ23 1121 aa16.86■□□□□ 0.29
SNRPD3-201ENST00000215829 KCNT2Q6UVM3 1135 aa16.86■□□□□ 0.29
SNRPD3-201ENST00000215829 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.86■□□□□ 0.29
SNRPD3-201ENST00000215829 STK32AQ8WU08 396 aa16.86■□□□□ 0.29
SNRPD3-201ENST00000215829 BCL7CQ8WUZ0 217 aaPredicted RBP16.86■□□□□ 0.29
SNRPD3-201ENST00000215829 C18orf8Q96DM3 657 aa16.86■□□□□ 0.29
SNRPD3-201ENST00000215829 PCED1BQ96HM7 432 aa16.86■□□□□ 0.29
SNRPD3-201ENST00000215829 IGSF21Q96ID5 467 aa16.86■□□□□ 0.29
SNRPD3-201ENST00000215829 PKMYT1Q99640 499 aa16.86■□□□□ 0.29
SNRPD3-201ENST00000215829 B3GNT5Q9BYG0 378 aa16.86■□□□□ 0.29
SNRPD3-201ENST00000215829 STRIP2Q9ULQ0 834 aa16.86■□□□□ 0.29
SNRPD3-201ENST00000215829 MRPL42Q9Y6G3 142 aaKnown RBP16.86■□□□□ 0.29
SNRPD3-201ENST00000215829 VWA8A3KMH1 1905 aa16.85■□□□□ 0.29
SNRPD3-201ENST00000215829 CARNS1A5YM72 827 aa16.85■□□□□ 0.29
SNRPD3-201ENST00000215829 CLDN5O00501 218 aa16.85■□□□□ 0.29
SNRPD3-201ENST00000215829 EFEMP2O95967 443 aa16.85■□□□□ 0.29
SNRPD3-201ENST00000215829 LAG3P18627 525 aa16.85■□□□□ 0.29
SNRPD3-201ENST00000215829 HTRA4P83105 476 aaPredicted RBP16.85■□□□□ 0.29
SNRPD3-201ENST00000215829 TSPY1Q01534 308 aa16.85■□□□□ 0.29
SNRPD3-201ENST00000215829 MAMLD1Q13495 774 aa16.85■□□□□ 0.29
SNRPD3-201ENST00000215829 MAPRE1Q15691 268 aaKnown RBP16.85■□□□□ 0.29
SNRPD3-201ENST00000215829 PMF1Q6P1K2 205 aa16.85■□□□□ 0.29
SNRPD3-201ENST00000215829 PHLDB2Q86SQ0 1253 aa16.85■□□□□ 0.29
SNRPD3-201ENST00000215829 CEP57Q86XR8 500 aa16.85■□□□□ 0.29
SNRPD3-201ENST00000215829 LRRC57Q8N9N7 239 aa16.85■□□□□ 0.29
SNRPD3-201ENST00000215829 ZNF564Q8TBZ8 553 aaPredicted RBP16.85■□□□□ 0.29
SNRPD3-201ENST00000215829 ZNF558Q96NG5 402 aa16.85■□□□□ 0.29
SNRPD3-201ENST00000215829 MED10Q9BTT4 135 aa16.85■□□□□ 0.29
SNRPD3-201ENST00000215829 DUSP16Q9BY84 665 aa16.85■□□□□ 0.29
SNRPD3-201ENST00000215829 SYNCQ9H7C4 482 aa16.85■□□□□ 0.29
SNRPD3-201ENST00000215829 MRPL47Q9HD33 250 aaKnown RBP16.85■□□□□ 0.29
SNRPD3-201ENST00000215829 PARVAQ9NVD7 372 aa16.85■□□□□ 0.29
SNRPD3-201ENST00000215829 JRKLQ9Y4A0 524 aa16.85■□□□□ 0.29
SNRPD3-201ENST00000215829 TCRBV5S1A1TA0A578 114 aa16.84■□□□□ 0.29
SNRPD3-201ENST00000215829 CTAGE9A4FU28 777 aa16.84■□□□□ 0.29
SNRPD3-201ENST00000215829 CCDC85CA6NKD9 419 aa16.84■□□□□ 0.29
SNRPD3-201ENST00000215829 TULP2O00295 520 aa16.84■□□□□ 0.29
SNRPD3-201ENST00000215829 GSCP56915 257 aaPredicted RBP16.84■□□□□ 0.29
SNRPD3-201ENST00000215829 SLC8A3P57103 927 aa16.84■□□□□ 0.29
SNRPD3-201ENST00000215829 ZNF268Q14587 947 aaPredicted RBP16.84■□□□□ 0.29
SNRPD3-201ENST00000215829 LLGL2Q6P1M3 1020 aa16.84■□□□□ 0.29
SNRPD3-201ENST00000215829 SLFN11Q7Z7L1 901 aa16.84■□□□□ 0.29
SNRPD3-201ENST00000215829 LRRTM3Q86VH5 581 aa16.84■□□□□ 0.29
SNRPD3-201ENST00000215829 PHOSPHO2Q8TCD6 241 aa16.84■□□□□ 0.29
SNRPD3-201ENST00000215829 TMEM209Q96SK2 561 aa16.84■□□□□ 0.29
SNRPD3-201ENST00000215829 NAPGQ99747 312 aaPredicted RBP16.84■□□□□ 0.29
SNRPD3-201ENST00000215829 SLC4A5Q9BY07 1137 aa16.84■□□□□ 0.29
SNRPD3-201ENST00000215829 MIS12Q9H081 205 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms