RNA–Protein interactions for RNA: ENST00000080059.11

HDAC7-201, Transcript of histone deacetylase 7, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HDAC7, Length 4,095 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-201ENST00000080059 HDAC11Q96DB2 347 aa13.72□□□□□ -0.21
HDAC7-201ENST00000080059 PLEKHA5Q9HAU0 1116 aa13.72□□□□□ -0.21
HDAC7-201ENST00000080059 GDF3Q9NR23 364 aa13.72□□□□□ -0.21
HDAC7-201ENST00000080059 NUP188Q5SRE5 1749 aa13.72□□□□□ -0.21
HDAC7-201ENST00000080059 DFFAO00273 331 aa13.71□□□□□ -0.21
HDAC7-201ENST00000080059 EEF1DP3Q658K8 133 aa13.71□□□□□ -0.21
HDAC7-201ENST00000080059 LBX2Q6XYB7 198 aa13.71□□□□□ -0.21
HDAC7-201ENST00000080059 MTMR14Q8NCE2 650 aa13.71□□□□□ -0.21
HDAC7-201ENST00000080059 ZSWIM2Q8NEG5 633 aa13.71□□□□□ -0.21
HDAC7-201ENST00000080059 MYCBPAPQ8TBZ2 947 aa13.71□□□□□ -0.21
HDAC7-201ENST00000080059 WNK4Q96J92 1243 aa13.71□□□□□ -0.21
HDAC7-201ENST00000080059 SPON2Q9BUD6 331 aa13.71□□□□□ -0.21
HDAC7-201ENST00000080059 PSMC3IPQ9P2W1 217 aaPredicted RBP13.71□□□□□ -0.21
HDAC7-201ENST00000080059 FRMD3A2A2Y4 597 aa13.71□□□□□ -0.21
HDAC7-201ENST00000080059 H0Y3Z8 333 aa13.71□□□□□ -0.21
HDAC7-201ENST00000080059 B4GALT5O43286 388 aa13.71□□□□□ -0.21
HDAC7-201ENST00000080059 EFHC1Q5JVL4 640 aa13.71□□□□□ -0.21
HDAC7-201ENST00000080059 SPATA21Q7Z572 469 aa13.71□□□□□ -0.21
HDAC7-201ENST00000080059 PPIL6Q8IXY8 311 aa13.71□□□□□ -0.21
HDAC7-201ENST00000080059 CNPY3Q9BT09 278 aa13.71□□□□□ -0.21
HDAC7-201ENST00000080059 ASB7Q9H672 318 aa13.71□□□□□ -0.21
HDAC7-201ENST00000080059 PDGFCQ9NRA1 345 aa13.71□□□□□ -0.21
HDAC7-201ENST00000080059 PRG3Q9Y2Y8 225 aaPredicted RBP13.71□□□□□ -0.21
HDAC7-201ENST00000080059 HES2Q9Y543 173 aa13.71□□□□□ -0.21
HDAC7-201ENST00000080059 C17orf102A2RUQ5 167 aa13.71□□□□□ -0.22
HDAC7-201ENST00000080059 M0QYT0 321 aa13.71□□□□□ -0.22
HDAC7-201ENST00000080059 GMNNO75496 209 aa13.71□□□□□ -0.22
HDAC7-201ENST00000080059 FAM200BP0CF97 657 aa13.71□□□□□ -0.22
HDAC7-201ENST00000080059 KCNA2P16389 499 aa13.71□□□□□ -0.22
HDAC7-201ENST00000080059 YY1P25490 414 aa13.71□□□□□ -0.22
HDAC7-201ENST00000080059 PMLP29590 882 aa13.71□□□□□ -0.22
HDAC7-201ENST00000080059 STIP1P31948 543 aaKnown RBP13.71□□□□□ -0.22
HDAC7-201ENST00000080059 KIAA0319LQ8IZA0 1049 aa13.71□□□□□ -0.22
HDAC7-201ENST00000080059 GSDMBQ8TAX9 411 aa13.71□□□□□ -0.22
HDAC7-201ENST00000080059 VCPIP1Q96JH7 1222 aa13.71□□□□□ -0.22
HDAC7-201ENST00000080059 AVENQ9NQS1 362 aaPredicted RBP13.71□□□□□ -0.22
HDAC7-201ENST00000080059 WHRNQ9P202 907 aa13.71□□□□□ -0.22
HDAC7-201ENST00000080059 KIAA1257Q9ULG3 409 aa13.71□□□□□ -0.22
HDAC7-201ENST00000080059 TYW5A2RUC4 315 aaKnown RBP13.7□□□□□ -0.22
HDAC7-201ENST00000080059 CFAP69A5D8W1 941 aa13.7□□□□□ -0.22
HDAC7-201ENST00000080059 MAFO75444 373 aaPredicted RBP13.7□□□□□ -0.22
HDAC7-201ENST00000080059 HSPA4LO95757 839 aa13.7□□□□□ -0.22
HDAC7-201ENST00000080059 ACADSBP45954 432 aa13.7□□□□□ -0.22
HDAC7-201ENST00000080059 ARFIP2P53365 341 aa13.7□□□□□ -0.22
HDAC7-201ENST00000080059 ZNF200P98182 395 aaPredicted RBP13.7□□□□□ -0.22
HDAC7-201ENST00000080059 MMEL1Q495T6 779 aa13.7□□□□□ -0.22
HDAC7-201ENST00000080059 DAW1Q8N136 415 aa13.7□□□□□ -0.22
HDAC7-201ENST00000080059 RAET1EQ8TD07 263 aa13.7□□□□□ -0.22
HDAC7-201ENST00000080059 PDCD6IPQ8WUM4 868 aaKnown RBP13.7□□□□□ -0.22
HDAC7-201ENST00000080059 VPS39Q96JC1 886 aa13.7□□□□□ -0.22
HDAC7-201ENST00000080059 TMEM134Q9H6X4 195 aa13.7□□□□□ -0.22
HDAC7-201ENST00000080059 MCF2P10911 925 aa13.7□□□□□ -0.22
HDAC7-201ENST00000080059 PCSK1P29120 753 aa13.7□□□□□ -0.22
HDAC7-201ENST00000080059 SERPINB6P35237 376 aa13.7□□□□□ -0.22
HDAC7-201ENST00000080059 MAP2K2P36507 400 aa13.7□□□□□ -0.22
HDAC7-201ENST00000080059 THPOP40225 353 aa13.7□□□□□ -0.22
HDAC7-201ENST00000080059 EPHB1P54762 984 aa13.7□□□□□ -0.22
HDAC7-201ENST00000080059 MCL1Q07820 350 aa13.7□□□□□ -0.22
HDAC7-201ENST00000080059 TAF1BQ53T94 588 aaPredicted RBP13.7□□□□□ -0.22
HDAC7-201ENST00000080059 FBXO47Q5MNV8 452 aa13.7□□□□□ -0.22
HDAC7-201ENST00000080059 SPATA2LQ8IUW3 424 aaPredicted RBP13.7□□□□□ -0.22
HDAC7-201ENST00000080059 OR6P1Q8NGX9 317 aa13.7□□□□□ -0.22
HDAC7-201ENST00000080059 URGCPQ8TCY9 931 aa13.7□□□□□ -0.22
HDAC7-201ENST00000080059 RAPGEF5Q92565 580 aa13.7□□□□□ -0.22
HDAC7-201ENST00000080059 EXT2Q93063 718 aa13.7□□□□□ -0.22
HDAC7-201ENST00000080059 SGSM3Q96HU1 749 aa13.7□□□□□ -0.22
HDAC7-201ENST00000080059 CYP3A43Q9HB55 503 aa13.7□□□□□ -0.22
HDAC7-201ENST00000080059 SLC38A7Q9NVC3 462 aa13.7□□□□□ -0.22
HDAC7-201ENST00000080059 ZNF214Q9UL59 606 aaPredicted RBP13.7□□□□□ -0.22
HDAC7-201ENST00000080059 BARX2Q9UMQ3 279 aaPredicted RBP13.7□□□□□ -0.22
HDAC7-201ENST00000080059 TIMM13Q9Y5L4 95 aaPredicted RBP13.7□□□□□ -0.22
HDAC7-201ENST00000080059 MYPNQ86TC9 1320 aa13.7□□□□□ -0.22
HDAC7-201ENST00000080059 COG7P83436 770 aa13.7□□□□□ -0.22
HDAC7-201ENST00000080059 DNAJC3Q13217 504 aa13.7□□□□□ -0.22
HDAC7-201ENST00000080059 PTK7Q13308 1070 aa13.7□□□□□ -0.22
HDAC7-201ENST00000080059 MYLK4Q86YV6 388 aaPredicted RBP13.7□□□□□ -0.22
HDAC7-201ENST00000080059 CD302Q8IX05 232 aa13.7□□□□□ -0.22
HDAC7-201ENST00000080059 SCUBE3Q8IX30 993 aa13.7□□□□□ -0.22
HDAC7-201ENST00000080059 SKA2Q8WVK7 121 aaPredicted RBP13.7□□□□□ -0.22
HDAC7-201ENST00000080059 PCDHB18PQ96TA0 734 aa13.7□□□□□ -0.22
HDAC7-201ENST00000080059 DDIT4Q9NX09 232 aa13.7□□□□□ -0.22
HDAC7-201ENST00000080059 SAE1Q9UBE0 346 aaPredicted RBP13.7□□□□□ -0.22
HDAC7-201ENST00000080059 ZFP69BQ9UJL9 534 aa13.7□□□□□ -0.22
HDAC7-201ENST00000080059 DNPEPQ9ULA0 475 aa13.7□□□□□ -0.22
HDAC7-201ENST00000080059 RBAK-RBAKDNI3L0D1 243 aa13.69□□□□□ -0.22
HDAC7-201ENST00000080059 EEF2KO00418 725 aaKnown RBP13.69□□□□□ -0.22
HDAC7-201ENST00000080059 FARP2O94887 1054 aaPredicted RBP13.69□□□□□ -0.22
HDAC7-201ENST00000080059 TTC4O95801 387 aa13.69□□□□□ -0.22
HDAC7-201ENST00000080059 PNPLA4P41247 253 aa13.69□□□□□ -0.22
HDAC7-201ENST00000080059 RPL7AP62424 266 aaKnown RBP13.69□□□□□ -0.22
HDAC7-201ENST00000080059 ZNF844Q08AG5 666 aa13.69□□□□□ -0.22
HDAC7-201ENST00000080059 PRAMEF19Q5SWL8 479 aa13.69□□□□□ -0.22
HDAC7-201ENST00000080059 PRELID2Q8N945 189 aa13.69□□□□□ -0.22
HDAC7-201ENST00000080059 AGR3Q8TD06 166 aa13.69□□□□□ -0.22
HDAC7-201ENST00000080059 HES6Q96HZ4 224 aa13.69□□□□□ -0.22
HDAC7-201ENST00000080059 SERPINB12Q96P63 405 aa13.69□□□□□ -0.22
HDAC7-201ENST00000080059 DCLK3Q9C098 648 aa13.69□□□□□ -0.22
HDAC7-201ENST00000080059 VTA1Q9NP79 307 aa13.69□□□□□ -0.22
HDAC7-201ENST00000080059 SMG5Q9UPR3 1016 aaKnown RBP13.69□□□□□ -0.22
HDAC7-201ENST00000080059 LAMB4A4D0S4 1761 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms