RNA–Protein interactions for RNA: ENST00000003912.7

NIPAL3-201, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 5,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-201ENST00000003912 SLFN11Q7Z7L1 901 aa10.81□□□□□ -0.68
NIPAL3-201ENST00000003912 MFN1Q8IWA4 741 aa10.81□□□□□ -0.68
NIPAL3-201ENST00000003912 IPMKQ8NFU5 416 aa10.81□□□□□ -0.68
NIPAL3-201ENST00000003912 TFB1MQ8WVM0 346 aaKnown RBP10.81□□□□□ -0.68
NIPAL3-201ENST00000003912 UROC1Q96N76 676 aa10.81□□□□□ -0.68
NIPAL3-201ENST00000003912 FOXP3Q9BZS1 431 aa10.81□□□□□ -0.68
NIPAL3-201ENST00000003912 AIPL1Q9NZN9 384 aa10.81□□□□□ -0.68
NIPAL3-201ENST00000003912 PARP4Q9UKK3 1724 aaKnown RBP10.81□□□□□ -0.68
NIPAL3-201ENST00000003912 TRAF3IP3Q9Y228 551 aa10.81□□□□□ -0.68
NIPAL3-201ENST00000003912 MON2Q7Z3U7 1717 aa10.81□□□□□ -0.68
NIPAL3-201ENST00000003912 MMEP08473 750 aa10.81□□□□□ -0.68
NIPAL3-201ENST00000003912 GZMAP12544 262 aa10.81□□□□□ -0.68
NIPAL3-201ENST00000003912 CD44P16070 742 aaKnown RBP10.81□□□□□ -0.68
NIPAL3-201ENST00000003912 TKTL1P51854 596 aa10.81□□□□□ -0.68
NIPAL3-201ENST00000003912 ZNF280AP59817 542 aaPredicted RBP10.81□□□□□ -0.68
NIPAL3-201ENST00000003912 FSCBQ5H9T9 825 aa10.81□□□□□ -0.68
NIPAL3-201ENST00000003912 TIGD7Q6NT04 549 aaPredicted RBP10.81□□□□□ -0.68
NIPAL3-201ENST00000003912 ZNF467Q7Z7K2 595 aaPredicted RBP10.81□□□□□ -0.68
NIPAL3-201ENST00000003912 GIPC2Q8TF65 315 aa10.81□□□□□ -0.68
NIPAL3-201ENST00000003912 RIN2Q8WYP3 895 aaPredicted RBP10.81□□□□□ -0.68
NIPAL3-201ENST00000003912 UPF1Q92900 1129 aaKnown RBP eCLIP10.81□□□□□ -0.682e-6■■■■■ 29.9
NIPAL3-201ENST00000003912 BHMTQ93088 406 aa10.81□□□□□ -0.68
NIPAL3-201ENST00000003912 SERPINI1Q99574 410 aa10.81□□□□□ -0.68
NIPAL3-201ENST00000003912 SYNDIG1Q9H7V2 258 aa10.81□□□□□ -0.68
NIPAL3-201ENST00000003912 KCNMB3Q9NPA1 279 aa10.81□□□□□ -0.68
NIPAL3-201ENST00000003912 CHST12Q9NRB3 414 aa10.81□□□□□ -0.68
NIPAL3-201ENST00000003912 ZC3H7BQ9UGR2 993 aaKnown RBP10.81□□□□□ -0.68
NIPAL3-201ENST00000003912 XPO7Q9UIA9 1087 aaKnown RBP10.81□□□□□ -0.68
NIPAL3-201ENST00000003912 TSR3Q9UJK0 312 aaKnown RBP10.81□□□□□ -0.68
NIPAL3-201ENST00000003912 APOBEC2Q9Y235 224 aaKnown RBP10.81□□□□□ -0.68
NIPAL3-201ENST00000003912 CNTNAP2Q9UHC6 1331 aa10.8□□□□□ -0.68
NIPAL3-201ENST00000003912 ESYT3A0FGR9 886 aa10.8□□□□□ -0.68
NIPAL3-201ENST00000003912 LACTBL1A8MY62 500 aa10.8□□□□□ -0.68
NIPAL3-201ENST00000003912 EIF4BP23588 611 aaKnown RBP10.8□□□□□ -0.68
NIPAL3-201ENST00000003912 OXCT1P55809 520 aa10.8□□□□□ -0.68
NIPAL3-201ENST00000003912 CCDC38Q502W7 563 aa10.8□□□□□ -0.68
NIPAL3-201ENST00000003912 EARS2Q5JPH6 523 aaKnown RBP10.8□□□□□ -0.68
NIPAL3-201ENST00000003912 PPM1LQ5SGD2 360 aa10.8□□□□□ -0.68
NIPAL3-201ENST00000003912 TMEM86AQ8N2M4 240 aa10.8□□□□□ -0.68
NIPAL3-201ENST00000003912 CARNMT1Q8N4J0 409 aa10.8□□□□□ -0.68
NIPAL3-201ENST00000003912 SMARCD1Q96GM5 515 aa10.8□□□□□ -0.68
NIPAL3-201ENST00000003912 FRMD8P1Q9BZ68 369 aaPredicted RBP10.8□□□□□ -0.68
NIPAL3-201ENST00000003912 PITPNM3Q9BZ71 974 aa10.8□□□□□ -0.68
NIPAL3-201ENST00000003912 RRN3Q9NYV6 651 aa10.8□□□□□ -0.68
NIPAL3-201ENST00000003912 PLAGL2Q9UPG8 496 aa10.8□□□□□ -0.68
NIPAL3-201ENST00000003912 ZNF263O14978 683 aa10.8□□□□□ -0.68
NIPAL3-201ENST00000003912 RTN3O95197 1032 aaPredicted RBP10.8□□□□□ -0.68
NIPAL3-201ENST00000003912 GRK4P32298 578 aa10.8□□□□□ -0.68
NIPAL3-201ENST00000003912 CREMQ03060 361 aa10.8□□□□□ -0.68
NIPAL3-201ENST00000003912 LBRQ14739 615 aaKnown RBP10.8□□□□□ -0.68
NIPAL3-201ENST00000003912 SLC25A41Q8N5S1 370 aa10.8□□□□□ -0.68
NIPAL3-201ENST00000003912 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.8□□□□□ -0.68
NIPAL3-201ENST00000003912 ZNF558Q96NG5 402 aa10.8□□□□□ -0.68
NIPAL3-201ENST00000003912 DEFB118Q96PH6 123 aa10.8□□□□□ -0.68
NIPAL3-201ENST00000003912 MTMR9Q96QG7 549 aa10.8□□□□□ -0.68
NIPAL3-201ENST00000003912 CELF4Q9BZC1 486 aaKnown RBP10.8□□□□□ -0.68
NIPAL3-201ENST00000003912 ELOVL4Q9GZR5 314 aa10.8□□□□□ -0.68
NIPAL3-201ENST00000003912 TIMM13Q9Y5L4 95 aaPredicted RBP10.8□□□□□ -0.68
NIPAL3-201ENST00000003912 PHEXP78562 749 aa10.8□□□□□ -0.68
NIPAL3-201ENST00000003912 HABP4Q5JVS0 413 aaKnown RBP10.8□□□□□ -0.68
NIPAL3-201ENST00000003912 GJC2Q5T442 439 aaPredicted RBP10.8□□□□□ -0.68
NIPAL3-201ENST00000003912 NUGGCQ68CJ6 796 aa10.8□□□□□ -0.68
NIPAL3-201ENST00000003912 SZRD1Q7Z422 152 aa10.8□□□□□ -0.68
NIPAL3-201ENST00000003912 TXLNGQ9NUQ3 528 aa10.8□□□□□ -0.68
NIPAL3-201ENST00000003912 TMEM51Q9NW97 253 aa10.8□□□□□ -0.68
NIPAL3-201ENST00000003912 TRIM33Q9UPN9 1127 aa10.8□□□□□ -0.68
NIPAL3-201ENST00000003912 ORC6Q9Y5N6 252 aa10.8□□□□□ -0.68
NIPAL3-201ENST00000003912 ATRNO75882 1429 aa10.8□□□□□ -0.68
NIPAL3-201ENST00000003912 TMEM150BA6NC51 233 aa10.8□□□□□ -0.68
NIPAL3-201ENST00000003912 PYGLP06737 847 aa10.8□□□□□ -0.68
NIPAL3-201ENST00000003912 RBBP7Q16576 425 aa10.8□□□□□ -0.68
NIPAL3-201ENST00000003912 PREPLQ4J6C6 727 aaPredicted RBP10.8□□□□□ -0.68
NIPAL3-201ENST00000003912 FIGNQ5HY92 759 aa10.8□□□□□ -0.68
NIPAL3-201ENST00000003912 RNF217Q8TC41 542 aa10.8□□□□□ -0.68
NIPAL3-201ENST00000003912 TRIM45Q9H8W5 580 aaPredicted RBP10.8□□□□□ -0.68
NIPAL3-201ENST00000003912 MRFAP1Q9Y605 127 aa10.8□□□□□ -0.68
NIPAL3-201ENST00000003912 TARSL2A2RTX5 802 aaKnown RBP10.79□□□□□ -0.68
NIPAL3-201ENST00000003912 ADCY6O43306 1168 aa10.79□□□□□ -0.68
NIPAL3-201ENST00000003912 MAFO75444 373 aaPredicted RBP10.79□□□□□ -0.68
NIPAL3-201ENST00000003912 SPAG6O75602 509 aa10.79□□□□□ -0.68
NIPAL3-201ENST00000003912 PAX3P23760 479 aa10.79□□□□□ -0.68
NIPAL3-201ENST00000003912 RGS4P49798 205 aa10.79□□□□□ -0.68
NIPAL3-201ENST00000003912 GEMP55040 296 aa10.79□□□□□ -0.68
NIPAL3-201ENST00000003912 NECAB2Q7Z6G3 386 aa10.79□□□□□ -0.68
NIPAL3-201ENST00000003912 SLAIN1Q8ND83 568 aa10.79□□□□□ -0.68
NIPAL3-201ENST00000003912 CNPY3Q9BT09 278 aa10.79□□□□□ -0.68
NIPAL3-201ENST00000003912 FRMD8Q9BZ67 464 aaPredicted RBP10.79□□□□□ -0.68
NIPAL3-201ENST00000003912 THAP2Q9H0W7 228 aa10.79□□□□□ -0.68
NIPAL3-201ENST00000003912 ROBO1Q9Y6N7 1651 aa10.79□□□□□ -0.68
NIPAL3-201ENST00000003912 LOC102724159A0A0B4J2E5 919 aa10.79□□□□□ -0.68
NIPAL3-201ENST00000003912 RECQL4O94761 1208 aa10.79□□□□□ -0.68
NIPAL3-201ENST00000003912 ANP32DO95626 131 aa10.79□□□□□ -0.68
NIPAL3-201ENST00000003912 SYF2O95926 243 aaKnown RBP10.79□□□□□ -0.68
NIPAL3-201ENST00000003912 SLC12A3P55017 1021 aa10.79□□□□□ -0.68
NIPAL3-201ENST00000003912 PTK2BQ14289 1009 aa10.79□□□□□ -0.68
NIPAL3-201ENST00000003912 PWP2Q15269 919 aaKnown RBP10.79□□□□□ -0.68
NIPAL3-201ENST00000003912 PTRHD1Q6GMV3 140 aaKnown RBP10.79□□□□□ -0.68
NIPAL3-201ENST00000003912 ANKMY2Q8IV38 441 aa10.79□□□□□ -0.68
NIPAL3-201ENST00000003912 MSL3Q8N5Y2 521 aaKnown RBP10.79□□□□□ -0.68
NIPAL3-201ENST00000003912 FAM172AQ8WUF8 416 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms