RNA–Protein interactions for RNA: ENSMUST00000092215.5

Ccdc38-201, Transcript of Coiled-coil domain-containing protein 38, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc38, Length 3,656 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38-201ENSMUST00000092215 Kif26aQ52KG5 1881 aa10.49□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 MylpfP97457 169 aa10.49□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 NeblQ0II04 452 aa10.49□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Q3TQQ9 903 aa10.49□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Kctd19Q562E2 927 aa10.49□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Sema4bQ62179 823 aa10.49□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Colgalt2Q6NVG7 625 aa10.49□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Ints6lQ8BND4 861 aa10.49□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Csnk1g3Q8C4X2 424 aa10.49□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Olfr356Q8VFP5 315 aa10.49□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Pin4Q9CWW6 131 aa10.49□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Rnf225Q9D7D1 332 aa10.49□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Trpv2Q9WTR1 756 aa10.49□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 0610012G03RikA0A0J9YTR2 95 aa10.48□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Ppfia4B8QI36 1187 aa10.48□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Gm10720D3Z1I5 223 aa10.48□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Gm3371F7CQW8 167 aa10.48□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Dpysl4O35098 572 aa10.48□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Dennd1bQ3U1T9 766 aa10.48□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 SpdyaQ5IBH7 310 aa10.48□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Traf3Q60803 567 aa10.48□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Kpna1Q60960 538 aa10.48□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Q6PD19 689 aa10.48□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Bank1Q80VH0 783 aa10.48□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 TraipQ8VIG6 470 aa10.48□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Themis3Q9CU24 569 aa10.48□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Slc35g2D3YVE8 412 aa10.48□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Farp1F8VPU2 1048 aa10.48□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Smpd2O70572 419 aa10.48□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Rpl7aP12970 266 aaKnown RBP10.48□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Smarcad1Q04692 1021 aa10.48□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Cyp2j11Q3UNV2 504 aa10.48□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 KaznQ69ZS8 779 aa10.48□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Shkbp1Q6P7W2 704 aa10.48□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 DstykQ6XUX1 927 aa10.48□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Wdtc1Q80ZK9 677 aa10.48□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Abraxas1Q8BPZ8 407 aa10.48□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Tp53inp2Q8CFU8 221 aa10.48□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Hip1Q8VD75 1029 aaKnown RBP10.48□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Twf1Q91YR1 350 aaKnown RBP10.48□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Clp1Q99LI9 425 aa10.48□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Timp4Q9JHB3 224 aa10.48□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Gys1Q9Z1E4 738 aaKnown RBP10.48□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Btbd18A0A0A6YY25 723 aa10.48□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Mup10A2BIN1 180 aa10.48□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Mup14A2CEK7 180 aa10.48□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Mup19A9C497 187 aa10.48□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Mup15A9R9W0 180 aa10.48□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Mup17B5X0G2 180 aa10.48□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Fam124aD3Z5V4 536 aa10.48□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Mup8E9PVW0 235 aa10.48□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Mup7E9QA79 235 aa10.48□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Dsg3O35902 993 aa10.48□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Trappc3O55013 180 aa10.48□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Mup6P02762 180 aa10.48□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Mup1P11588 180 aa10.48□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Mup2P11589 180 aa10.48□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 PfkmP47857 780 aaKnown RBP10.48□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Anxa5P48036 319 aa10.48□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 PltpP55065 493 aa10.48□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Rplp2P99027 115 aaKnown RBP10.48□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 March5Q3KNM2 278 aa10.48□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Serac1Q3U213 654 aa10.48□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Odr4Q4PJX1 447 aa10.48□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Slc20a1Q61609 681 aa10.48□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Sin3bQ62141 1098 aa10.48□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Trim37Q6PCX9 961 aa10.48□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Nipal1Q8BMW7 416 aa10.48□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Il33Q8BVZ5 266 aa10.48□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Agbl3Q8CDP0 1006 aa10.48□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Ifi205aQ8CGE8 404 aa10.48□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Phc3Q8CHP6 981 aa10.48□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 NapgQ9CWZ7 312 aa10.48□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Tpd52l2Q9CYZ2 220 aaKnown RBP10.48□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Cpne8Q9DC53 577 aa10.48□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Ptgdr2Q9Z2J6 382 aa10.48□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Gm4924A0A1B0GR71 966 aa10.47□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Zscan4dA7KBS4 506 aa10.47□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Yme1l1O88967 715 aaKnown RBP10.47□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Cd44P15379 778 aa10.47□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Ctnnb1Q02248 781 aaKnown RBP10.47□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Zscan4fQ3URS2 506 aa10.47□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Snd1Q78PY7 910 aaKnown RBP10.47□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Zscan4cQ80VJ6 506 aa10.47□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Tcp10aQ80W76 438 aa10.47□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Zswim4Q8C7B8 1101 aa10.47□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Rassf9Q8K342 435 aa10.47□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Tbx22Q8K402 517 aa10.47□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Olfr348Q8VGK3 313 aa10.47□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 MrgpreQ91ZB7 310 aa10.47□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Bbox1Q924Y0 387 aa10.47□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Thap12Q9CUX1 758 aa10.47□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Ddx56Q9D0R4 546 aaKnown RBP10.47□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Spata17Q9D552 379 aa10.47□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 IscuQ9D7P6 168 aa10.47□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Lrrc46Q9DAP0 323 aa10.47□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Chmp2aQ9DB34 222 aa10.47□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Pacsin2Q9WVE8 486 aaKnown RBP10.47□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 Gm5485A0A1D5RM98 91 aa10.47□□□□□ -0.73
Ccdc38-201ENSMUST00000092215 C6E9Q6D8 931 aa10.47□□□□□ -0.73
Retrieved 100 of 22,080 RNA–protein pairs in 15.7 ms