RNA–Protein interactions for RNA: ENSMUST00000086923.5

Col17a1-202, Transcript of Collagen alpha-1(XVII) chain, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Col17a1, Length 5,477 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1-202ENSMUST00000086923 Cfap65Q3V0B4 1847 aa17.04■□□□□ 0.32
Col17a1-202ENSMUST00000086923 Cul9Q80TT8 1865 aa17.04■□□□□ 0.32
Col17a1-202ENSMUST00000086923 Cdhr2E9Q7P9 1308 aa17.04■□□□□ 0.32
Col17a1-202ENSMUST00000086923 Gm4869A0A1B0GSG7 984 aa17.04■□□□□ 0.32
Col17a1-202ENSMUST00000086923 Srpk1O70551 648 aaKnown RBP17.04■□□□□ 0.32
Col17a1-202ENSMUST00000086923 Akr1c6P70694 323 aa17.04■□□□□ 0.32
Col17a1-202ENSMUST00000086923 Pstpip1P97814 415 aa17.04■□□□□ 0.32
Col17a1-202ENSMUST00000086923 Aars2Q14CH7 980 aa17.04■□□□□ 0.32
Col17a1-202ENSMUST00000086923 Defa17Q64016 82 aa17.04■□□□□ 0.32
Col17a1-202ENSMUST00000086923 Rbm12b1Q80YR9 836 aaKnown RBP17.04■□□□□ 0.32
Col17a1-202ENSMUST00000086923 Arhgef25Q9CWR0 618 aa17.04■□□□□ 0.32
Col17a1-202ENSMUST00000086923 VarsQ9Z1Q9 1263 aaKnown RBP17.04■□□□□ 0.32
Col17a1-202ENSMUST00000086923 Aqp1Q02013 269 aa17.04■□□□□ 0.32
Col17a1-202ENSMUST00000086923 Epha2Q03145 977 aa17.04■□□□□ 0.32
Col17a1-202ENSMUST00000086923 Coa7Q921H9 231 aa17.04■□□□□ 0.32
Col17a1-202ENSMUST00000086923 NamptQ99KQ4 491 aa17.04■□□□□ 0.32
Col17a1-202ENSMUST00000086923 Spag6Q9JLI7 507 aa17.04■□□□□ 0.32
Col17a1-202ENSMUST00000086923 GakQ99KY4 1305 aa17.04■□□□□ 0.32
Col17a1-202ENSMUST00000086923 Gm7682A0A0J9YUM1 481 aa17.04■□□□□ 0.32
Col17a1-202ENSMUST00000086923 Dhx35A2ACQ1 703 aaKnown RBP17.04■□□□□ 0.32
Col17a1-202ENSMUST00000086923 Grik3B1AS29 919 aa17.04■□□□□ 0.32
Col17a1-202ENSMUST00000086923 Pgbd1E9Q492 415 aa17.04■□□□□ 0.32
Col17a1-202ENSMUST00000086923 Gm5145F8VQ88 278 aa17.04■□□□□ 0.32
Col17a1-202ENSMUST00000086923 PrlP06879 226 aa17.04■□□□□ 0.32
Col17a1-202ENSMUST00000086923 Msh3P13705 1091 aa17.04■□□□□ 0.32
Col17a1-202ENSMUST00000086923 Pik3r1P26450 724 aa17.04■□□□□ 0.32
Col17a1-202ENSMUST00000086923 Slc16a1P53986 493 aa17.04■□□□□ 0.32
Col17a1-202ENSMUST00000086923 Vps33bP59016 617 aa17.04■□□□□ 0.32
Col17a1-202ENSMUST00000086923 Lemd2Q6DVA0 511 aa17.04■□□□□ 0.32
Col17a1-202ENSMUST00000086923 Sel1l3Q80TS8 1137 aa17.04■□□□□ 0.32
Col17a1-202ENSMUST00000086923 Dusp19Q8K4T5 220 aa17.04■□□□□ 0.32
Col17a1-202ENSMUST00000086923 Itm2cQ91VK4 269 aa17.04■□□□□ 0.32
Col17a1-202ENSMUST00000086923 Anxa13Q99JG3 317 aa17.04■□□□□ 0.32
Col17a1-202ENSMUST00000086923 Khdc3Q9CWU5 440 aa17.04■□□□□ 0.32
Col17a1-202ENSMUST00000086923 NkapQ9D0F4 415 aaKnown RBP17.04■□□□□ 0.32
Col17a1-202ENSMUST00000086923 Kdm5aQ3UXZ9 1690 aa17.04■□□□□ 0.32
Col17a1-202ENSMUST00000086923 Alox5P48999 674 aa17.03■□□□□ 0.32
Col17a1-202ENSMUST00000086923 Vamp7P70280 220 aa17.03■□□□□ 0.32
Col17a1-202ENSMUST00000086923 Pou6f1Q07916 301 aa17.03■□□□□ 0.32
Col17a1-202ENSMUST00000086923 Fam178bQ24JP3 464 aa17.03■□□□□ 0.32
Col17a1-202ENSMUST00000086923 FaxcQ3UMF9 409 aa17.03■□□□□ 0.32
Col17a1-202ENSMUST00000086923 Kctd1Q5M956 257 aa17.03■□□□□ 0.32
Col17a1-202ENSMUST00000086923 Tcf12Q61286 706 aa17.03■□□□□ 0.32
Col17a1-202ENSMUST00000086923 Nlrp9cQ66X01 1004 aa17.03■□□□□ 0.32
Col17a1-202ENSMUST00000086923 Gemin4Q6P6L6 1058 aaKnown RBP17.03■□□□□ 0.32
Col17a1-202ENSMUST00000086923 Samd4aQ8CBY1 711 aaKnown RBP17.03■□□□□ 0.32
Col17a1-202ENSMUST00000086923 Arel1Q8CHG5 823 aa17.03■□□□□ 0.32
Col17a1-202ENSMUST00000086923 NagaQ9QWR8 415 aa17.03■□□□□ 0.32
Col17a1-202ENSMUST00000086923 Gm7356A0A087WSA6 508 aa17.03■□□□□ 0.32
Col17a1-202ENSMUST00000086923 S100zB9EJL3 99 aa17.03■□□□□ 0.32
Col17a1-202ENSMUST00000086923 Nlrc4Q3UP24 1024 aa17.03■□□□□ 0.32
Col17a1-202ENSMUST00000086923 Tex13bQ99MW5 186 aa17.03■□□□□ 0.32
Col17a1-202ENSMUST00000086923 Ropn1Q9ESG2 212 aa17.03■□□□□ 0.32
Col17a1-202ENSMUST00000086923 Htra1Q9R118 480 aa17.03■□□□□ 0.32
Col17a1-202ENSMUST00000086923 Vwa5b1A9Z1V5 1215 aa17.03■□□□□ 0.32
Col17a1-202ENSMUST00000086923 Eno2P17183 434 aa17.03■□□□□ 0.32
Col17a1-202ENSMUST00000086923 Man1a1P45700 655 aa17.03■□□□□ 0.32
Col17a1-202ENSMUST00000086923 HrQ61645 1182 aa17.03■□□□□ 0.32
Col17a1-202ENSMUST00000086923 Hmgxb4Q80Y32 594 aaKnown RBP17.03■□□□□ 0.32
Col17a1-202ENSMUST00000086923 Gatad2aQ8CHY6 629 aaKnown RBP17.03■□□□□ 0.32
Col17a1-202ENSMUST00000086923 Tle6Q9WVB3 581 aa17.03■□□□□ 0.32
Col17a1-202ENSMUST00000086923 Stfa3P35173 103 aa17.03■□□□□ 0.32
Col17a1-202ENSMUST00000086923 Rab21P35282 222 aa17.03■□□□□ 0.32
Col17a1-202ENSMUST00000086923 SpdyaQ5IBH7 310 aa17.03■□□□□ 0.32
Col17a1-202ENSMUST00000086923 Dph1Q5NCQ5 438 aa17.03■□□□□ 0.32
Col17a1-202ENSMUST00000086923 Bhlhe22Q8C6A8 355 aa17.03■□□□□ 0.32
Col17a1-202ENSMUST00000086923 Stxbp5Q8K400 1152 aaKnown RBP17.03■□□□□ 0.32
Col17a1-202ENSMUST00000086923 Ddx39aQ8VDW0 427 aaKnown RBP17.03■□□□□ 0.32
Col17a1-202ENSMUST00000086923 Usp31E9Q6Y8 1344 aa17.03■□□□□ 0.32
Col17a1-202ENSMUST00000086923 Ccdc120A2AEV7 629 aa17.03■□□□□ 0.32
Col17a1-202ENSMUST00000086923 Ttll10A4Q9F3 704 aa17.03■□□□□ 0.32
Col17a1-202ENSMUST00000086923 UmpsP13439 481 aaKnown RBP17.03■□□□□ 0.32
Col17a1-202ENSMUST00000086923 Pou4f1P17208 421 aa17.03■□□□□ 0.32
Col17a1-202ENSMUST00000086923 Zfy2P20662 777 aa17.03■□□□□ 0.32
Col17a1-202ENSMUST00000086923 Foxred2Q3USW5 665 aa17.03■□□□□ 0.32
Col17a1-202ENSMUST00000086923 Fam129aQ3UW53 926 aa17.03■□□□□ 0.32
Col17a1-202ENSMUST00000086923 Pde10aQ8CA95 790 aa17.03■□□□□ 0.32
Col17a1-202ENSMUST00000086923 Alg9Q8VDI9 611 aa17.03■□□□□ 0.32
Col17a1-202ENSMUST00000086923 Ppp1r3aQ99MR9 1089 aa17.03■□□□□ 0.32
Col17a1-202ENSMUST00000086923 Zcrb1Q9CZ96 217 aaKnown RBP17.03■□□□□ 0.32
Col17a1-202ENSMUST00000086923 Gm8922F6XVS9 199 aa17.02■□□□□ 0.32
Col17a1-202ENSMUST00000086923 DbtP53395 482 aa17.02■□□□□ 0.32
Col17a1-202ENSMUST00000086923 Rnaseh2bQ80ZV0 308 aa17.02■□□□□ 0.32
Col17a1-202ENSMUST00000086923 Klhl26Q8BGY4 606 aa17.02■□□□□ 0.32
Col17a1-202ENSMUST00000086923 Fbxo28Q8BIG4 368 aa17.02■□□□□ 0.32
Col17a1-202ENSMUST00000086923 Pnma1Q8C1C8 353 aa17.02■□□□□ 0.32
Col17a1-202ENSMUST00000086923 Oma1Q9D8H7 521 aa17.02■□□□□ 0.32
Col17a1-202ENSMUST00000086923 Gm13023A2A8N2 498 aa17.02■□□□□ 0.32
Col17a1-202ENSMUST00000086923 Ttc7bE9Q6P5 843 aa17.02■□□□□ 0.32
Col17a1-202ENSMUST00000086923 Spin2fJ3QPU0 254 aa17.02■□□□□ 0.32
Col17a1-202ENSMUST00000086923 Rpl10aP53026 217 aaKnown RBP17.02■□□□□ 0.32
Col17a1-202ENSMUST00000086923 Afap1l2Q5DTU0 825 aa17.02■□□□□ 0.32
Col17a1-202ENSMUST00000086923 FancbQ5XJY6 703 aa17.02■□□□□ 0.32
Col17a1-202ENSMUST00000086923 Phf21aQ6ZPK0 659 aa17.02■□□□□ 0.32
Col17a1-202ENSMUST00000086923 Miga2Q8BK03 593 aa17.02■□□□□ 0.32
Col17a1-202ENSMUST00000086923 Gpc5Q8CAL5 572 aa17.02■□□□□ 0.32
Col17a1-202ENSMUST00000086923 Slc47a1Q8K0H1 567 aa17.02■□□□□ 0.32
Col17a1-202ENSMUST00000086923 Dnajc5bQ9CQ94 199 aa17.02■□□□□ 0.32
Col17a1-202ENSMUST00000086923 RalbQ9JIW9 206 aa17.02■□□□□ 0.32
Col17a1-202ENSMUST00000086923 Gucy1a2F8VQK3 730 aa17.02■□□□□ 0.31
Retrieved 100 of 22,080 RNA–protein pairs in 21.7 ms