RNA–Protein interactions for RNA: ENSMUST00000041643.3

Pcif1-201, Transcript of Phosphorylated CTD-interacting factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcif1, Length 5,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcif1-201ENSMUST00000041643 Wbp11Q923D5 641 aaKnown RBP12.41□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Chst7Q9EP78 484 aa12.41□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Ccdc175E9PVB3 822 aa12.4□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Rfc1P35601 1131 aa12.4□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Tmem237Q3V0J1 427 aa12.4□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Prmt6Q6NZB1 378 aa12.4□□□□□ -0.42
Pcif1-201ENSMUST00000041643 ErfeQ6PGN1 340 aa12.4□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Rhpn2Q8BWR8 686 aa12.4□□□□□ -0.42
Pcif1-201ENSMUST00000041643 MafaQ8CF90 359 aa12.4□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Tgif2lx2Q8K5B9 231 aa12.4□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Ppp6r2Q8R3Q2 923 aa12.4□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Pcdhb1Q91Y08 818 aa12.4□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Pkp2Q9CQ73 795 aaKnown RBP12.4□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Pin4Q9CWW6 131 aa12.4□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Slc13a1Q9JHI4 594 aa12.4□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Dennd5bA2RSQ0 1274 aa12.4□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Kcnu1O54982 1121 aa12.4□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Gm4952Q5FW57 296 aa12.4□□□□□ -0.42
Pcif1-201ENSMUST00000041643 PostnQ62009 838 aa12.4□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Mcph1Q7TT79 822 aa12.4□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Pnma3Q8JZW8 466 aa12.4□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Nxnl1Q8VC33 217 aa12.4□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Cnbd2Q9D5U8 673 aa12.4□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Duox1A2AQ92 1551 aa12.4□□□□□ -0.42
Pcif1-201ENSMUST00000041643 AspgA0JNU3 564 aa12.4□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Magea4F2Z493 315 aa12.4□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Ppm1aP49443 382 aa12.4□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Q6DFW0 481 aa12.4□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Ephx4Q6IE26 359 aa12.4□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Rbbp5Q8BX09 538 aaKnown RBP12.4□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Fbxo32Q9CPU7 355 aa12.4□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Q9D4A5 307 aa12.4□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Scgb2b11A0A087WR49 112 aa12.4□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Gm21964A0A1W2P7S4 437 aa12.4□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Gm3402K7N5P2 326 aa12.4□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Ppp3caP63328 521 aa12.4□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Cdh8P97291 799 aa12.4□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Sdr16c6Q05A13 316 aa12.4□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Etaa1Q5SVT3 877 aa12.4□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Adcy2Q80TL1 1090 aa12.4□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Chmp2bQ8BJF9 213 aa12.4□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Ndfip2Q91ZP6 311 aa12.4□□□□□ -0.42
Pcif1-201ENSMUST00000041643 Btnl4A2CG29 586 aa12.39□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Apol7bB1AQP7 369 aa12.39□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Olfr414E9Q5P8 317 aa12.39□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Rnf113a2Q14B01 337 aa12.39□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Apol7eQ3UZ24 369 aa12.39□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Tmem169Q8BG50 297 aa12.39□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Eif4bQ8BGD9 611 aaKnown RBP12.39□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Mtrf1lQ8BJU9 373 aa12.39□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Ccser1Q8C0C4 895 aa12.39□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Serpinb10Q8K1K6 397 aa12.39□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Ltbp4Q8K4G1 1666 aa12.39□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Atp8b4A2ANX3 1194 aa12.39□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Vmn2r77L7N2B7 854 aa12.39□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Rgs2O08849 211 aa12.39□□□□□ -0.43
Pcif1-201ENSMUST00000041643 StrnO55106 780 aa12.39□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Klra1P20937 262 aa12.39□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Tdrd5Q5VCS6 1040 aa12.39□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Adam6bQ6IMH7 756 aa12.39□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Fam120bQ6RI63 786 aa12.39□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Znf507Q6ZPY5 941 aa12.39□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Ttc24Q8BYG0 334 aa12.39□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Ppp1r2Q9DCL8 206 aa12.39□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Tk2Q9R088 270 aa12.39□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Klhl33G3UW92 533 aa12.39□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Cxcl9P18340 126 aa12.39□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Lrrc24Q8BHA1 521 aa12.39□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Foxp3Q99JB6 429 aa12.39□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Anxa13Q99JG3 317 aa12.39□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Cuedc2Q9CXX9 284 aa12.39□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Lrrc46Q9DAP0 323 aa12.39□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Serpina1fQ9DCQ7 411 aa12.39□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Stk25Q9Z2W1 426 aa12.39□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Dhx35A2ACQ1 703 aaKnown RBP12.39□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Rmdn3Q3UJU9 470 aa12.39□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Ankrd34bQ3UUF8 508 aa12.39□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Creb3Q61817 404 aa12.39□□□□□ -0.43
Pcif1-201ENSMUST00000041643 CbarpQ66L44 698 aa12.39□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Mill1Q8HWE7 395 aa12.39□□□□□ -0.43
Pcif1-201ENSMUST00000041643 BfarQ8R079 450 aa12.39□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Rpn2Q9DBG6 631 aaKnown RBP12.39□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Trpm5Q9JJH7 1158 aa12.39□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Orc1Q9Z1N2 840 aaKnown RBP12.39□□□□□ -0.43
Pcif1-201ENSMUST00000041643 HnrnpcQ9Z204 313 aaKnown RBP12.39□□□□□ -0.43
Pcif1-201ENSMUST00000041643 1700017N19RikA0A087WPJ1 469 aa12.39□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Magea10A2AMW4 325 aa12.39□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Prl3b1P09586 222 aa12.39□□□□□ -0.43
Pcif1-201ENSMUST00000041643 IppP28575 584 aa12.39□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Papd7Q6PB75 542 aa12.39□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Ntrk3Q6VNS1 825 aa12.39□□□□□ -0.43
Pcif1-201ENSMUST00000041643 HpseQ6YGZ1 535 aa12.39□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Olfr412Q7TRW7 312 aa12.39□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Tmem161bQ8C2L6 487 aa12.39□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Sbk1Q8QZX0 417 aa12.39□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Vps33aQ9D2N9 598 aa12.39□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Rab11fip1Q9D620 645 aa12.39□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Ppp2r3cQ9JK24 453 aa12.39□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Cyth1Q9QX11 398 aa12.39□□□□□ -0.43
Pcif1-201ENSMUST00000041643 Gm7694J3QNH8 270 aa12.38□□□□□ -0.43
Retrieved 100 of 22,080 RNA–protein pairs in 18.4 ms