RNA–Protein interactions for RNA: ENSMUST00000005841.15

Ctcf-201, Transcript of Transcriptional repressor CTCF, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctcf, Length 3,782 nt, Biotype protein coding, Subcellular localisation Exosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctcf-201ENSMUST00000005841 Cldn22Q9D7U6 220 aa17.67■□□□□ 0.42
Ctcf-201ENSMUST00000005841 Tk2Q9R088 270 aa17.67■□□□□ 0.42
Ctcf-201ENSMUST00000005841 Prmt2Q9R144 448 aa17.67■□□□□ 0.42
Ctcf-201ENSMUST00000005841 Ptpn20O55082 426 aa17.66■□□□□ 0.42
Ctcf-201ENSMUST00000005841 LynP25911 512 aa17.66■□□□□ 0.42
Ctcf-201ENSMUST00000005841 Clhc1Q5M6W3 596 aa17.66■□□□□ 0.42
Ctcf-201ENSMUST00000005841 DstykQ6XUX1 927 aa17.66■□□□□ 0.42
Ctcf-201ENSMUST00000005841 Tbx10Q810F8 385 aa17.66■□□□□ 0.42
Ctcf-201ENSMUST00000005841 Arhgap24Q8C4V1 747 aa17.66■□□□□ 0.42
Ctcf-201ENSMUST00000005841 Panx3Q8CEG0 392 aa17.66■□□□□ 0.42
Ctcf-201ENSMUST00000005841 Ivns1abpQ920Q8 642 aa17.66■□□□□ 0.42
Ctcf-201ENSMUST00000005841 GatbQ99JT1 557 aa17.66■□□□□ 0.42
Ctcf-201ENSMUST00000005841 2210011C24RikA0A087WQ89 206 aa17.66■□□□□ 0.42
Ctcf-201ENSMUST00000005841 Gm45194A0A140LJG2 572 aa17.66■□□□□ 0.42
Ctcf-201ENSMUST00000005841 CaluO35887 315 aa17.66■□□□□ 0.42
Ctcf-201ENSMUST00000005841 Tarbp2P97473 365 aa17.66■□□□□ 0.42
Ctcf-201ENSMUST00000005841 Vps72Q62481 368 aa17.66■□□□□ 0.42
Ctcf-201ENSMUST00000005841 Eif4bQ8BGD9 611 aaKnown RBP17.66■□□□□ 0.42
Ctcf-201ENSMUST00000005841 Kctd6Q8BNL5 237 aa17.66■□□□□ 0.42
Ctcf-201ENSMUST00000005841 Slc7a14Q8BXR1 771 aa17.66■□□□□ 0.42
Ctcf-201ENSMUST00000005841 Pm20d1Q8C165 503 aa17.66■□□□□ 0.42
Ctcf-201ENSMUST00000005841 Socs4Q91ZA6 436 aa17.66■□□□□ 0.42
Ctcf-201ENSMUST00000005841 DenrQ9CQJ6 198 aaKnown RBP17.66■□□□□ 0.42
Ctcf-201ENSMUST00000005841 Arhgef25Q9CWR0 618 aa17.66■□□□□ 0.42
Ctcf-201ENSMUST00000005841 Chrac1Q9JKP8 129 aa17.66■□□□□ 0.42
Ctcf-201ENSMUST00000005841 Kifc1Q9QWT9 674 aa17.66■□□□□ 0.42
Ctcf-201ENSMUST00000005841 Il3P01586 166 aa17.66■□□□□ 0.42
Ctcf-201ENSMUST00000005841 PtprcP06800 1291 aa17.66■□□□□ 0.42
Ctcf-201ENSMUST00000005841 Gata5P97489 404 aa17.66■□□□□ 0.42
Ctcf-201ENSMUST00000005841 Fam117bQ3U3E2 584 aa17.66■□□□□ 0.42
Ctcf-201ENSMUST00000005841 Cand2Q6ZQ73 1235 aa17.66■□□□□ 0.42
Ctcf-201ENSMUST00000005841 Peg10Q7TN75 958 aaKnown RBP17.66■□□□□ 0.42
Ctcf-201ENSMUST00000005841 Rcn2Q8BP92 320 aa17.66■□□□□ 0.42
Ctcf-201ENSMUST00000005841 Elmo3Q8BYZ7 720 aa17.66■□□□□ 0.42
Ctcf-201ENSMUST00000005841 BrdtQ91Y44 956 aa17.66■□□□□ 0.42
Ctcf-201ENSMUST00000005841 Rpn1Q91YQ5 608 aaKnown RBP17.66■□□□□ 0.42
Ctcf-201ENSMUST00000005841 Ccdc130Q9D516 385 aa17.66■□□□□ 0.42
Ctcf-201ENSMUST00000005841 Ces1aE9PYP1 563 aa17.65■□□□□ 0.42
Ctcf-201ENSMUST00000005841 Usp17lbE9Q9U0 468 aa17.65■□□□□ 0.42
Ctcf-201ENSMUST00000005841 Atp5bP56480 529 aaKnown RBP17.65■□□□□ 0.42
Ctcf-201ENSMUST00000005841 Srbd1Q497V5 1015 aaKnown RBP17.65■□□□□ 0.42
Ctcf-201ENSMUST00000005841 Cept1Q8BGS7 416 aa17.65■□□□□ 0.42
Ctcf-201ENSMUST00000005841 Q8R1Y2 203 aa17.65■□□□□ 0.42
Ctcf-201ENSMUST00000005841 Noa1Q9JJG9 693 aaKnown RBP17.65■□□□□ 0.42
Ctcf-201ENSMUST00000005841 Gm10250G3X9L6 160 aaKnown RBP17.65■□□□□ 0.42
Ctcf-201ENSMUST00000005841 4930430A15RikQ05AC5 485 aa17.65■□□□□ 0.42
Ctcf-201ENSMUST00000005841 Pyroxd1Q3TMV7 498 aa17.65■□□□□ 0.42
Ctcf-201ENSMUST00000005841 Ece1Q4PZA2 769 aa17.65■□□□□ 0.42
Ctcf-201ENSMUST00000005841 Pik3r5Q5SW28 871 aa17.65■□□□□ 0.42
Ctcf-201ENSMUST00000005841 N4bp1Q6A037 893 aa17.65■□□□□ 0.42
Ctcf-201ENSMUST00000005841 Rasa4Q6PFQ7 802 aa17.65■□□□□ 0.42
Ctcf-201ENSMUST00000005841 Mgat5Q8R4G6 740 aa17.65■□□□□ 0.42
Ctcf-201ENSMUST00000005841 Tlr3Q99MB1 905 aa17.65■□□□□ 0.42
Ctcf-201ENSMUST00000005841 Atp5hQ9DCX2 161 aa17.65■□□□□ 0.42
Ctcf-201ENSMUST00000005841 Ttc17E9PVB5 1198 aa17.65■□□□□ 0.42
Ctcf-201ENSMUST00000005841 Art2bO35975 289 aa17.65■□□□□ 0.42
Ctcf-201ENSMUST00000005841 Rcsd1Q3UZA1 412 aa17.65■□□□□ 0.42
Ctcf-201ENSMUST00000005841 Tmem45aQ60774 273 aa17.65■□□□□ 0.42
Ctcf-201ENSMUST00000005841 Scube1Q6NZL8 1018 aa17.65■□□□□ 0.42
Ctcf-201ENSMUST00000005841 March4Q80TE3 409 aa17.65■□□□□ 0.42
Ctcf-201ENSMUST00000005841 Cntnap5cQ0V8T7 1305 aa17.64■□□□□ 0.42
Ctcf-201ENSMUST00000005841 UgcgO88693 394 aa17.64■□□□□ 0.42
Ctcf-201ENSMUST00000005841 Vav1P27870 845 aa17.64■□□□□ 0.42
Ctcf-201ENSMUST00000005841 GssP51855 474 aa17.64■□□□□ 0.42
Ctcf-201ENSMUST00000005841 Q14AM7 275 aa17.64■□□□□ 0.42
Ctcf-201ENSMUST00000005841 SpidrQ8BGX7 933 aa17.64■□□□□ 0.42
Ctcf-201ENSMUST00000005841 AsphQ8BSY0 741 aa17.64■□□□□ 0.42
Ctcf-201ENSMUST00000005841 Camkk2Q8C078 588 aa17.64■□□□□ 0.42
Ctcf-201ENSMUST00000005841 Zcchc18Q8VD24 393 aa17.64■□□□□ 0.42
Ctcf-201ENSMUST00000005841 Tcaf2Q921K8 919 aa17.64■□□□□ 0.42
Ctcf-201ENSMUST00000005841 1700013H16RikQ9DAC5 291 aa17.64■□□□□ 0.42
Ctcf-201ENSMUST00000005841 Extl3Q9WVL6 918 aa17.64■□□□□ 0.42
Ctcf-201ENSMUST00000005841 Siah3B2RWG3 268 aa17.64■□□□□ 0.41
Ctcf-201ENSMUST00000005841 Hcn3O88705 779 aa17.64■□□□□ 0.41
Ctcf-201ENSMUST00000005841 Tom1O88746 492 aa17.64■□□□□ 0.41
Ctcf-201ENSMUST00000005841 Sipa1P46062 1037 aa17.64■□□□□ 0.41
Ctcf-201ENSMUST00000005841 Grb7Q03160 535 aa17.64■□□□□ 0.41
Ctcf-201ENSMUST00000005841 Zbtb48Q1H9T6 681 aa17.64■□□□□ 0.41
Ctcf-201ENSMUST00000005841 Trim72Q1XH17 477 aa17.64■□□□□ 0.41
Ctcf-201ENSMUST00000005841 Mif4gdQ3UBZ5 222 aa17.64■□□□□ 0.41
Ctcf-201ENSMUST00000005841 C2cd5Q7TPS5 1016 aaKnown RBP17.64■□□□□ 0.41
Ctcf-201ENSMUST00000005841 Tgm6Q8BM11 706 aa17.64■□□□□ 0.41
Ctcf-201ENSMUST00000005841 Mrpl11Q9CQF0 192 aaKnown RBP17.64■□□□□ 0.41
Ctcf-201ENSMUST00000005841 Cd2bp2Q9CWK3 342 aaKnown RBP17.64■□□□□ 0.41
Ctcf-201ENSMUST00000005841 Taf7lQ9D3R9 471 aa17.64■□□□□ 0.41
Ctcf-201ENSMUST00000005841 Ppp2r3cQ9JK24 453 aa17.64■□□□□ 0.41
Ctcf-201ENSMUST00000005841 Tspyl1O88852 379 aa17.64■□□□□ 0.41
Ctcf-201ENSMUST00000005841 Cd2P08920 344 aa17.64■□□□□ 0.41
Ctcf-201ENSMUST00000005841 Sf3b2Q3UJB0 878 aaKnown RBP17.64■□□□□ 0.41
Ctcf-201ENSMUST00000005841 Slc26a2Q62273 739 aa17.64■□□□□ 0.41
Ctcf-201ENSMUST00000005841 Wdtc1Q80ZK9 677 aa17.64■□□□□ 0.41
Ctcf-201ENSMUST00000005841 Grsf1Q8C5Q4 479 aaKnown RBP17.64■□□□□ 0.41
Ctcf-201ENSMUST00000005841 Kiaa0319lQ8K135 1048 aa17.64■□□□□ 0.41
Ctcf-201ENSMUST00000005841 Scrn2Q8VCA8 425 aa17.64■□□□□ 0.41
Ctcf-201ENSMUST00000005841 Cmtm5Q9D6G9 156 aa17.64■□□□□ 0.41
Ctcf-201ENSMUST00000005841 Ttll6A4Q9E8 822 aa17.63■□□□□ 0.41
Ctcf-201ENSMUST00000005841 Gm3415J3QMS8 315 aa17.63■□□□□ 0.41
Ctcf-201ENSMUST00000005841 Rpl22P67984 128 aaKnown RBP17.63■□□□□ 0.41
Ctcf-201ENSMUST00000005841 Fdxacb1Q3UY23 622 aa17.63■□□□□ 0.41
Ctcf-201ENSMUST00000005841 Gas7Q60780 421 aa17.63■□□□□ 0.41
Retrieved 100 of 22,080 RNA–protein pairs in 23.8 ms