RNA–Protein interactions for RNA: YPL006W

NCR1, Transcript of Vacuolar membrane protein, yeastyeast

Gene NCR1, Length 3,513 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NCR1YPL006W LSM2P38203 95 aaKnown RBP3.23□□□□□ -1.89
NCR1YPL006W DOG2P38773 246 aa3.23□□□□□ -1.89
NCR1YPL006W HAC1P41546 238 aa3.23□□□□□ -1.89
NCR1YPL006W SSU72P53538 206 aaPredicted RBP3.23□□□□□ -1.89
NCR1YPL006W MRX11Q03079 207 aa3.23□□□□□ -1.89
NCR1YPL006W YCR007CP25354 239 aa3.23□□□□□ -1.89
NCR1YPL006W RPS26AP39938 119 aaKnown RBP3.23□□□□□ -1.89
NCR1YPL006W YFL051CP43552 160 aa3.23□□□□□ -1.89
NCR1YPL006W FSF1Q12029 327 aaKnown RBP3.23□□□□□ -1.89
NCR1YPL006W RKI1Q12189 258 aa3.23□□□□□ -1.89
NCR1YPL006W YDR215CQ12240 137 aa3.23□□□□□ -1.89
NCR1YPL006W RPL39P04650 51 aa3.22□□□□□ -1.89
NCR1YPL006W MRPL31P14063 131 aaPredicted RBP3.22□□□□□ -1.89
NCR1YPL006W FYV4P38783 130 aaPredicted RBP3.22□□□□□ -1.89
NCR1YPL006W YDL183CP48569 320 aa3.22□□□□□ -1.89
NCR1YPL006W YGL118CP53132 145 aa3.22□□□□□ -1.89
NCR1YPL006W HTB1P02293 131 aaKnown RBP3.22□□□□□ -1.89
NCR1YPL006W CYC3P06182 269 aa3.22□□□□□ -1.89
NCR1YPL006W MRS1P07266 363 aa3.22□□□□□ -1.89
NCR1YPL006W DFR1P07807 211 aaKnown RBP RIP-Chip data3.22□□□□□ -1.89not detected
NCR1YPL006W RPB10P22139 70 aa3.22□□□□□ -1.89
NCR1YPL006W SFT2P38166 215 aa3.22□□□□□ -1.89
NCR1YPL006W YGP1P38616 354 aaKnown RBP3.22□□□□□ -1.89
NCR1YPL006W SDS23P53172 527 aa3.22□□□□□ -1.89
NCR1YPL006W YNR064CP53750 290 aa3.22□□□□□ -1.89
NCR1YPL006W SWT21P53873 357 aaPredicted RBP3.22□□□□□ -1.89
NCR1YPL006W RPL23AP0CX41 137 aaKnown RBP3.22□□□□□ -1.89
NCR1YPL006W RPL23BP0CX42 137 aaKnown RBP3.22□□□□□ -1.89
NCR1YPL006W YPT10P38146 199 aa3.22□□□□□ -1.89
NCR1YPL006W YBL071CP38185 102 aa3.22□□□□□ -1.89
NCR1YPL006W YJL213WP40896 331 aa3.22□□□□□ -1.89
NCR1YPL006W AYT1Q12226 474 aa3.22□□□□□ -1.89
NCR1YPL006W ATO3Q12359 275 aa3.22□□□□□ -1.89
NCR1YPL006W SCS22Q6Q595 175 aa3.22□□□□□ -1.89
NCR1YPL006W RPS23AP0CX29 145 aaKnown RBP3.21□□□□□ -1.9
NCR1YPL006W RPS23BP0CX30 145 aa3.21□□□□□ -1.9
NCR1YPL006W ATP10P18496 279 aa3.21□□□□□ -1.9
NCR1YPL006W LST8P41318 303 aa3.21□□□□□ -1.9
NCR1YPL006W YFR045WP43617 309 aa3.21□□□□□ -1.9
NCR1YPL006W YGR017WP53210 297 aa3.21□□□□□ -1.9
NCR1YPL006W CWC27Q02770 301 aa3.21□□□□□ -1.9
NCR1YPL006W ERS1P17261 260 aa3.21□□□□□ -1.9
NCR1YPL006W LDB16P25587 256 aa3.21□□□□□ -1.9
NCR1YPL006W YHL037CP38733 133 aa3.21□□□□□ -1.9
NCR1YPL006W THG1P53215 237 aaKnown RBP3.21□□□□□ -1.9
NCR1YPL006W HST4P53688 370 aa3.21□□□□□ -1.9
NCR1YPL006W GRH1Q04410 372 aaKnown RBP3.21□□□□□ -1.9
NCR1YPL006W MBF1O14467 151 aaKnown RBP3.2□□□□□ -1.9
NCR1YPL006W CPT1P17898 393 aa3.2□□□□□ -1.9
NCR1YPL006W YPS1P32329 569 aa3.2□□□□□ -1.9
NCR1YPL006W SOR1P35497 357 aaKnown RBP3.2□□□□□ -1.9
NCR1YPL006W UPS3Q04006 179 aa3.2□□□□□ -1.9
NCR1YPL006W ARC18Q05933 178 aaKnown RBP3.2□□□□□ -1.9
NCR1YPL006W ERF2Q06551 359 aa3.2□□□□□ -1.9
NCR1YPL006W SOR2Q07786 357 aa3.2□□□□□ -1.9
NCR1YPL006W COX2P00410 251 aa3.2□□□□□ -1.9
NCR1YPL006W ADE8P04161 214 aa3.2□□□□□ -1.9
NCR1YPL006W MDM10P18409 493 aa3.2□□□□□ -1.9
NCR1YPL006W RPI1P23250 407 aaKnown RBP3.2□□□□□ -1.9
NCR1YPL006W MOH1P38191 138 aa3.2□□□□□ -1.9
NCR1YPL006W GLE2P40066 365 aa3.2□□□□□ -1.9
NCR1YPL006W MSL1P40567 111 aaPredicted RBP3.2□□□□□ -1.9
NCR1YPL006W POP3P53833 195 aaPredicted RBP3.2□□□□□ -1.9
NCR1YPL006W YDR366CP87287 132 aa3.2□□□□□ -1.9
NCR1YPL006W IZH3Q07959 543 aa3.2□□□□□ -1.9
NCR1YPL006W TIM18Q08749 192 aa3.2□□□□□ -1.9
NCR1YPL006W YHR213WP0CI67 198 aa3.2□□□□□ -1.9
NCR1YPL006W YFL068WP0CX99 160 aa3.2□□□□□ -1.9
NCR1YPL006W YLL066W-AP0CY00 160 aa3.2□□□□□ -1.9
NCR1YPL006W YLL067W-AP0CY01 160 aa3.2□□□□□ -1.9
NCR1YPL006W IMP2P46972 177 aa3.2□□□□□ -1.9
NCR1YPL006W PIN2Q12057 282 aa3.2□□□□□ -1.9
NCR1YPL006W HTB2P02294 131 aa3.19□□□□□ -1.9
NCR1YPL006W DDI2P0CH63 225 aa3.19□□□□□ -1.9
NCR1YPL006W DDI3P0CH64 225 aa3.19□□□□□ -1.9
NCR1YPL006W ELF1P36053 145 aa3.19□□□□□ -1.9
NCR1YPL006W PRS4P38063 326 aaPredicted RBP3.19□□□□□ -1.9
NCR1YPL006W CRZ1P53968 678 aa3.19□□□□□ -1.9
NCR1YPL006W MIX17Q03667 156 aa3.19□□□□□ -1.9
NCR1YPL006W DPP1Q05521 289 aa3.19□□□□□ -1.9
NCR1YPL006W FEN2P25621 512 aaKnown RBP3.19□□□□□ -1.9
NCR1YPL006W YKR070WP36151 352 aaKnown RBP3.19□□□□□ -1.9
NCR1YPL006W ADH5P38113 351 aaKnown RBP3.19□□□□□ -1.9
NCR1YPL006W ALG14P38242 237 aa3.19□□□□□ -1.9
NCR1YPL006W CTR2P38865 189 aa3.19□□□□□ -1.9
NCR1YPL006W SEC72P39742 193 aaKnown RBP3.19□□□□□ -1.9
NCR1YPL006W YMR141CP40211 102 aa3.19□□□□□ -1.9
NCR1YPL006W YPI1P43587 155 aa3.19□□□□□ -1.9
NCR1YPL006W BNA2P47125 453 aa3.19□□□□□ -1.9
NCR1YPL006W VPS71Q03433 280 aa3.19□□□□□ -1.9
NCR1YPL006W ADH2P00331 348 aaKnown RBP3.19□□□□□ -1.9
NCR1YPL006W PAU7P39545 55 aa3.19□□□□□ -1.9
NCR1YPL006W YNL234WP53857 426 aa3.19□□□□□ -1.9
NCR1YPL006W SED1Q01589 338 aa3.19□□□□□ -1.9
NCR1YPL006W BET5Q03630 159 aa3.19□□□□□ -1.9
NCR1YPL006W RXT3Q07458 294 aa3.19□□□□□ -1.9
NCR1YPL006W YBR220CP38318 560 aa3.18□□□□□ -1.9
NCR1YPL006W PET8P38921 284 aa3.18□□□□□ -1.9
NCR1YPL006W MSC3Q05812 728 aa3.18□□□□□ -1.9
NCR1YPL006W YLR050CQ12155 161 aaKnown RBP3.18□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 121.7 ms