RNA–Protein interactions for RNA: YOR332W

VMA4, Transcript of Subunit E of the V1 domain of the vacuolar H+-ATPase (V-ATPase), yeast

Gene VMA4, Length 702 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VMA4	YOR332W	CSM4	Q08955	156 aa		4.89	□□□□□ -1.63
VMA4	YOR332W	PIS1	P06197	220 aa	Known RBP	4.88	□□□□□ -1.63
VMA4	YOR332W	YPR170W-B	P0C5R9	85 aa		4.88	□□□□□ -1.63
VMA4	YOR332W	ELF1	P36053	145 aa		4.88	□□□□□ -1.63
VMA4	YOR332W	FYV4	P38783	130 aa	Predicted RBP	4.88	□□□□□ -1.63
VMA4	YOR332W	YJL118W	P47022	219 aa		4.88	□□□□□ -1.63
VMA4	YOR332W	BRP1	P53194	125 aa		4.88	□□□□□ -1.63
VMA4	YOR332W	NUP53	Q03790	475 aa		4.88	□□□□□ -1.63
VMA4	YOR332W	RAV2	Q03956	351 aa		4.88	□□□□□ -1.63
VMA4	YOR332W	RFM1	Q12192	310 aa		4.88	□□□□□ -1.63
VMA4	YOR332W	YIL002W-A	Q3E7Z5	69 aa		4.88	□□□□□ -1.63
VMA4	YOR332W	YLR302C	O13544	120 aa		4.87	□□□□□ -1.63
VMA4	YOR332W	ZRT1	P32804	376 aa		4.87	□□□□□ -1.63
VMA4	YOR332W	HAC1	P41546	238 aa		4.87	□□□□□ -1.63
VMA4	YOR332W	TDA4	P47153	279 aa		4.87	□□□□□ -1.63
VMA4	YOR332W	YGL118C	P53132	145 aa		4.87	□□□□□ -1.63
VMA4	YOR332W	YNR064C	P53750	290 aa		4.87	□□□□□ -1.63
VMA4	YOR332W	YDR366C	P87287	132 aa		4.87	□□□□□ -1.63
VMA4	YOR332W	API2	Q04413	109 aa		4.87	□□□□□ -1.63
VMA4	YOR332W	GIM5	Q04493	163 aa		4.87	□□□□□ -1.63
VMA4	YOR332W	YDR114C	Q04597	100 aa		4.87	□□□□□ -1.63
VMA4	YOR332W	FIT2	Q08906	153 aa		4.87	□□□□□ -1.63
VMA4	YOR332W	HFA1	P32874	2273 aa		4.86	□□□□□ -1.63
VMA4	YOR332W	HTB1	P02293	131 aa	Known RBP	4.86	□□□□□ -1.63
VMA4	YOR332W	HTB2	P02294	131 aa		4.86	□□□□□ -1.63
VMA4	YOR332W	DAL82	P21705	255 aa		4.86	□□□□□ -1.63
VMA4	YOR332W	HSP12	P22943	109 aa	Known RBP	4.86	□□□□□ -1.63
VMA4	YOR332W	YDL183C	P48569	320 aa		4.86	□□□□□ -1.63
VMA4	YOR332W	SIP18	P50263	79 aa		4.86	□□□□□ -1.63
VMA4	YOR332W	THG1	P53215	237 aa	Known RBP	4.86	□□□□□ -1.63
VMA4	YOR332W	SSU72	P53538	206 aa	Predicted RBP	4.86	□□□□□ -1.63
VMA4	YOR332W	RKI1	Q12189	258 aa		4.86	□□□□□ -1.63
VMA4	YOR332W	TOR2	P32600	2474 aa	Known RBP	4.86	□□□□□ -1.63
VMA4	YOR332W	CYC3	P06182	269 aa		4.85	□□□□□ -1.63
VMA4	YOR332W	NOP1	P15646	327 aa	Known RBP	4.85	□□□□□ -1.63
VMA4	YOR332W	FZF1	P32805	299 aa		4.85	□□□□□ -1.63
VMA4	YOR332W	CSH1	P38287	376 aa		4.85	□□□□□ -1.63
VMA4	YOR332W	BDH1	P39714	382 aa		4.85	□□□□□ -1.63
VMA4	YOR332W	YNL200C	P40165	246 aa	Known RBP	4.85	□□□□□ -1.63
VMA4	YOR332W	MSL1	P40567	111 aa	Predicted RBP	4.85	□□□□□ -1.63
VMA4	YOR332W	YGR017W	P53210	297 aa		4.85	□□□□□ -1.63
VMA4	YOR332W	YGR018C	P53211	109 aa		4.85	□□□□□ -1.63
VMA4	YOR332W	YNR071C	P53757	342 aa		4.85	□□□□□ -1.63
VMA4	YOR332W	MRX11	Q03079	207 aa		4.85	□□□□□ -1.63
VMA4	YOR332W	UPS3	Q04006	179 aa		4.85	□□□□□ -1.63
VMA4	YOR332W	YOS1	Q3E834	85 aa		4.85	□□□□□ -1.63
VMA4	YOR332W	MBF1	O14467	151 aa	Known RBP	4.84	□□□□□ -1.63
VMA4	YOR332W	ADH2	P00331	348 aa	Known RBP	4.84	□□□□□ -1.63
VMA4	YOR332W	COX2	P00410	251 aa		4.84	□□□□□ -1.63
VMA4	YOR332W	MRS1	P07266	363 aa		4.84	□□□□□ -1.63
VMA4	YOR332W	MRPL31	P14063	131 aa	Predicted RBP	4.84	□□□□□ -1.63
VMA4	YOR332W	PRE1	P22141	198 aa	Known RBP	4.84	□□□□□ -1.63
VMA4	YOR332W	RPI1	P23250	407 aa	Known RBP	4.84	□□□□□ -1.63
VMA4	YOR332W	YCR022C	P25620	114 aa		4.84	□□□□□ -1.63
VMA4	YOR332W	AGE2	P40529	298 aa		4.84	□□□□□ -1.63
VMA4	YOR332W	YFL015C	P43578	164 aa		4.84	□□□□□ -1.63
VMA4	YOR332W	YJL163C	P46996	555 aa		4.84	□□□□□ -1.63
VMA4	YOR332W	UBC11	P52492	156 aa		4.84	□□□□□ -1.63
VMA4	YOR332W	SDS23	P53172	527 aa		4.84	□□□□□ -1.63
VMA4	YOR332W	TOM7	P53507	60 aa		4.84	□□□□□ -1.63
VMA4	YOR332W	SWT21	P53873	357 aa	Predicted RBP	4.84	□□□□□ -1.63
VMA4	YOR332W	GRH1	Q04410	372 aa	Known RBP	4.84	□□□□□ -1.63
VMA4	YOR332W	FSF1	Q12029	327 aa	Known RBP	4.84	□□□□□ -1.63
VMA4	YOR332W	ATO3	Q12359	275 aa		4.84	□□□□□ -1.63
VMA4	YOR332W	RPL23A	P0CX41	137 aa	Known RBP	4.83	□□□□□ -1.64
VMA4	YOR332W	RPL23B	P0CX42	137 aa	Known RBP	4.83	□□□□□ -1.64
VMA4	YOR332W	YFL068W	P0CX99	160 aa		4.83	□□□□□ -1.64
VMA4	YOR332W	YLL066W-A	P0CY00	160 aa		4.83	□□□□□ -1.64
VMA4	YOR332W	YLL067W-A	P0CY01	160 aa		4.83	□□□□□ -1.64
VMA4	YOR332W	FEN2	P25621	512 aa	Known RBP	4.83	□□□□□ -1.64
VMA4	YOR332W	PRS4	P38063	326 aa	Predicted RBP	4.83	□□□□□ -1.64
VMA4	YOR332W	YPT10	P38146	199 aa		4.83	□□□□□ -1.64
VMA4	YOR332W	DOG2	P38773	246 aa		4.83	□□□□□ -1.64
VMA4	YOR332W	SEC72	P39742	193 aa	Known RBP	4.83	□□□□□ -1.64
VMA4	YOR332W	HUA1	P40325	198 aa		4.83	□□□□□ -1.64
VMA4	YOR332W	PIR5	P46999	287 aa		4.83	□□□□□ -1.64
VMA4	YOR332W	ARC18	Q05933	178 aa	Known RBP	4.83	□□□□□ -1.64
VMA4	YOR332W	GAT3	Q07928	141 aa		4.83	□□□□□ -1.64
VMA4	YOR332W	IZH3	Q07959	543 aa		4.83	□□□□□ -1.64
VMA4	YOR332W	YOR029W	Q12243	111 aa		4.83	□□□□□ -1.64
VMA4	YOR332W	RNH203	Q12338	110 aa		4.83	□□□□□ -1.64
VMA4	YOR332W	DDI2	P0CH63	225 aa		4.82	□□□□□ -1.64
VMA4	YOR332W	DDI3	P0CH64	225 aa		4.82	□□□□□ -1.64
VMA4	YOR332W	RPL35A	P0CX84	120 aa	Known RBP	4.82	□□□□□ -1.64
VMA4	YOR332W	RPL35B	P0CX85	120 aa	Known RBP	4.82	□□□□□ -1.64
VMA4	YOR332W	ATP10	P18496	279 aa		4.82	□□□□□ -1.64
VMA4	YOR332W	MRP49	P32388	137 aa		4.82	□□□□□ -1.64
VMA4	YOR332W	SFT2	P38166	215 aa		4.82	□□□□□ -1.64
VMA4	YOR332W	YBL071C	P38185	102 aa		4.82	□□□□□ -1.64
VMA4	YOR332W	LSM2	P38203	95 aa	Known RBP	4.82	□□□□□ -1.64
VMA4	YOR332W	YGP1	P38616	354 aa	Known RBP	4.82	□□□□□ -1.64
VMA4	YOR332W	MIC26	P50087	233 aa		4.82	□□□□□ -1.64
VMA4	YOR332W	POP3	P53833	195 aa	Predicted RBP	4.82	□□□□□ -1.64
VMA4	YOR332W	MOT3	P54785	490 aa	Known RBP	4.82	□□□□□ -1.64
VMA4	YOR332W	DPP1	Q05521	289 aa		4.82	□□□□□ -1.64
VMA4	YOR332W	YLR050C	Q12155	161 aa	Known RBP	4.82	□□□□□ -1.64
VMA4	YOR332W	SCS22	Q6Q595	175 aa		4.82	□□□□□ -1.64
VMA4	YOR332W	SEN1	Q00416	2231 aa	Known RBP	4.81	□□□□□ -1.64
VMA4	YOR332W	HEM4	P06174	275 aa		4.81	□□□□□ -1.64
VMA4	YOR332W	MDM10	P18409	493 aa		4.81	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 24.7 ms