RNA–Protein interactions for RNA: YOR227W

HER1, Transcript of Protein of unknown function, yeastyeast

Gene HER1, Length 3,741 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HER1YOR227W MRPL27P36526 146 aaPredicted RBP1.49□□□□□ -2.17
HER1YOR227W OM14P38325 134 aa1.49□□□□□ -2.17
HER1YOR227W VMA7P39111 118 aa1.49□□□□□ -2.17
HER1YOR227W AYR1P40471 297 aa1.49□□□□□ -2.17
HER1YOR227W CNL1Q06333 122 aa1.49□□□□□ -2.17
HER1YOR227W YLR042CQ07990 161 aa1.49□□□□□ -2.17
HER1YOR227W YDL211CQ12121 372 aa1.49□□□□□ -2.17
HER1YOR227W YOR376W-AQ3E805 51 aa1.49□□□□□ -2.17
HER1YOR227W RPL9AP05738 191 aaKnown RBP1.49□□□□□ -2.17
HER1YOR227W ASK1P35734 292 aa1.49□□□□□ -2.17
HER1YOR227W OST2P46964 130 aa1.49□□□□□ -2.17
HER1YOR227W RPL9BP51401 191 aaKnown RBP1.49□□□□□ -2.17
HER1YOR227W MPC3P53311 146 aa1.49□□□□□ -2.17
HER1YOR227W YOL029CQ08187 201 aa1.49□□□□□ -2.17
HER1YOR227W RRG7Q08774 242 aaPredicted RBP1.49□□□□□ -2.17
HER1YOR227W YOR097CQ12274 175 aaPredicted RBP1.49□□□□□ -2.17
HER1YOR227W YCL001W-BQ96VH2 84 aa1.49□□□□□ -2.17
HER1YOR227W BPH1P25356 2167 aa1.48□□□□□ -2.17
HER1YOR227W FMP49A0A023PZB3 126 aa1.48□□□□□ -2.17
HER1YOR227W ATP5P09457 212 aa1.48□□□□□ -2.17
HER1YOR227W SUI1P32911 108 aaKnown RBP1.48□□□□□ -2.17
HER1YOR227W SFC1P33303 322 aa1.48□□□□□ -2.17
HER1YOR227W MRPL17P36528 281 aa1.48□□□□□ -2.17
HER1YOR227W SNM1P40993 198 aa1.48□□□□□ -2.17
HER1YOR227W MIC19P43594 170 aa1.48□□□□□ -2.17
HER1YOR227W HHO1P53551 258 aa1.48□□□□□ -2.17
HER1YOR227W BOR1P53838 576 aa1.48□□□□□ -2.17
HER1YOR227W YDR115WQ04598 105 aa1.48□□□□□ -2.17
HER1YOR227W YLR281CQ05863 155 aa1.48□□□□□ -2.17
HER1YOR227W YOL014WQ08110 124 aa1.48□□□□□ -2.17
HER1YOR227W ATP14Q12349 124 aa1.48□□□□□ -2.17
HER1YOR227W SLO1Q3E784 85 aa1.48□□□□□ -2.17
HER1YOR227W YPR170W-BP0C5R9 85 aa1.48□□□□□ -2.17
HER1YOR227W PBI2P0CT04 75 aaKnown RBP1.48□□□□□ -2.17
HER1YOR227W MRS4P23500 304 aa1.48□□□□□ -2.17
HER1YOR227W TEM1P38987 245 aa1.48□□□□□ -2.17
HER1YOR227W PAC10P48363 199 aa1.48□□□□□ -2.17
HER1YOR227W PBA1Q05778 276 aa1.48□□□□□ -2.17
HER1YOR227W YBR298C-AQ8TGK4 73 aa1.48□□□□□ -2.17
HER1YOR227W YML100W-AQ8TGT0 57 aa1.48□□□□□ -2.17
HER1YOR227W HIS3P06633 220 aa1.48□□□□□ -2.17
HER1YOR227W CBP6P07253 162 aaPredicted RBP1.48□□□□□ -2.17
HER1YOR227W PHO85P17157 305 aa1.48□□□□□ -2.17
HER1YOR227W PCL1P24867 279 aa1.48□□□□□ -2.17
HER1YOR227W TFC1P32367 649 aa1.48□□□□□ -2.17
HER1YOR227W SDH3P33421 198 aa1.48□□□□□ -2.17
HER1YOR227W ASP1P38986 381 aaPredicted RBP1.48□□□□□ -2.17
HER1YOR227W FCY21P40039 528 aa1.48□□□□□ -2.17
HER1YOR227W PRE5P40302 234 aaKnown RBP1.48□□□□□ -2.17
HER1YOR227W XPT1P47165 209 aa1.48□□□□□ -2.17
HER1YOR227W TIM13P53299 105 aa1.48□□□□□ -2.17
HER1YOR227W BUD25P85052 153 aa1.48□□□□□ -2.17
HER1YOR227W SDH7Q04401 133 aa1.48□□□□□ -2.17
HER1YOR227W YOR268CQ08734 132 aa1.48□□□□□ -2.17
HER1YOR227W DDR48P18899 430 aaKnown RBP1.47□□□□□ -2.17
HER1YOR227W MRPL24P36525 258 aaPredicted RBP1.47□□□□□ -2.17
HER1YOR227W NSG1P38837 291 aa1.47□□□□□ -2.17
HER1YOR227W AIM2P39721 246 aa1.47□□□□□ -2.17
HER1YOR227W PFS2P42841 465 aaKnown RBP1.47□□□□□ -2.17
HER1YOR227W MPC1P53157 130 aaKnown RBP1.47□□□□□ -2.17
HER1YOR227W YDR366CP87287 132 aa1.47□□□□□ -2.17
HER1YOR227W TMA23Q03525 211 aa1.47□□□□□ -2.17
HER1YOR227W MEU1Q07938 337 aaKnown RBP RIP-Chip data1.47□□□□□ -2.17not detected
HER1YOR227W FSF1Q12029 327 aaKnown RBP1.47□□□□□ -2.17
HER1YOR227W ATP20Q12233 115 aa1.47□□□□□ -2.17
HER1YOR227W YKL068W-AQ3E826 78 aa1.47□□□□□ -2.17
HER1YOR227W YAR023CD6VPM8 179 aa1.47□□□□□ -2.17
HER1YOR227W CPA1P07258 411 aaKnown RBP1.47□□□□□ -2.17
HER1YOR227W YER039C-AP0CD97 72 aa1.47□□□□□ -2.17
HER1YOR227W COS8P38723 381 aa1.47□□□□□ -2.17
HER1YOR227W MPM1P40364 252 aa1.47□□□□□ -2.17
HER1YOR227W GEP7P53171 287 aa1.47□□□□□ -2.17
HER1YOR227W PIN3Q06449 215 aa1.47□□□□□ -2.17
HER1YOR227W ANT1Q06497 328 aa1.47□□□□□ -2.17
HER1YOR227W YPR174CQ06616 221 aaPredicted RBP1.47□□□□□ -2.17
HER1YOR227W YOL131WQ08270 108 aa1.47□□□□□ -2.17
HER1YOR227W YPL264CQ08980 353 aa1.47□□□□□ -2.17
HER1YOR227W YLR118CQ12354 227 aa1.47□□□□□ -2.17
HER1YOR227W YLR412C-AQ3E742 68 aa1.47□□□□□ -2.17
HER1YOR227W YOR020W-AQ3E824 90 aa1.47□□□□□ -2.17
HER1YOR227W DDI2P0CH63 225 aa1.46□□□□□ -2.17
HER1YOR227W DDI3P0CH64 225 aa1.46□□□□□ -2.17
HER1YOR227W BET1P22804 142 aa1.46□□□□□ -2.17
HER1YOR227W RPC19P28000 142 aaKnown RBP1.46□□□□□ -2.17
HER1YOR227W YPT53P36019 220 aa1.46□□□□□ -2.17
HER1YOR227W RRT13P40042 185 aa1.46□□□□□ -2.17
HER1YOR227W YER188WP40103 239 aa1.46□□□□□ -2.17
HER1YOR227W YGR039WP53225 103 aa1.46□□□□□ -2.17
HER1YOR227W YEL009C-AA0A023PZF2 135 aa1.46□□□□□ -2.18
HER1YOR227W TIR1P10863 254 aa1.46□□□□□ -2.18
HER1YOR227W SKG1P36169 355 aa1.46□□□□□ -2.18
HER1YOR227W PEP8P40335 379 aa1.46□□□□□ -2.18
HER1YOR227W YFL067WP43537 175 aa1.46□□□□□ -2.18
HER1YOR227W ALG9P53868 555 aaKnown RBP1.46□□□□□ -2.18
HER1YOR227W APS2Q00381 147 aa1.46□□□□□ -2.18
HER1YOR227W GAL83Q04739 417 aa1.46□□□□□ -2.18
HER1YOR227W SCW10Q04951 389 aa1.46□□□□□ -2.18
HER1YOR227W SPC3Q12133 184 aa1.46□□□□□ -2.18
HER1YOR227W VAR1P02381 398 aa1.46□□□□□ -2.18
HER1YOR227W SPT15P13393 240 aaKnown RBP1.46□□□□□ -2.18
Retrieved 100 of 5,963 RNA–protein pairs in 60.8 ms