RNA–Protein interactions for RNA: YNL288W

CAF40, Transcript of Component of the CCR4-NOT transcriptional complex, yeastyeast

Gene CAF40, Length 1,122 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CAF40YNL288W CAX4P53223 239 aa4.71□□□□□ -1.66
CAF40YNL288W FMP41P53889 259 aaKnown RBP4.71□□□□□ -1.66
CAF40YNL288W OCA2P53949 197 aa4.71□□□□□ -1.66
CAF40YNL288W UBC7Q02159 165 aa4.71□□□□□ -1.66
CAF40YNL288W SDO1Q07953 250 aaKnown RBP4.71□□□□□ -1.66
CAF40YNL288W MDM10P18409 493 aa4.7□□□□□ -1.66
CAF40YNL288W HSP12P22943 109 aaKnown RBP4.7□□□□□ -1.66
CAF40YNL288W MPC2P38857 129 aa4.7□□□□□ -1.66
CAF40YNL288W SNN1P48232 102 aa4.7□□□□□ -1.66
CAF40YNL288W PAU4P53427 120 aa4.7□□□□□ -1.66
CAF40YNL288W SME1Q12330 94 aaPredicted RBP4.7□□□□□ -1.66
CAF40YNL288W ATP14Q12349 124 aa4.7□□□□□ -1.66
CAF40YNL288W RPS2P25443 254 aaKnown RBP4.69□□□□□ -1.66
CAF40YNL288W ECM25P32525 599 aa4.69□□□□□ -1.66
CAF40YNL288W TIR2P33890 251 aa4.69□□□□□ -1.66
CAF40YNL288W CMC1P36064 111 aa4.69□□□□□ -1.66
CAF40YNL288W SDH4P37298 181 aa4.69□□□□□ -1.66
CAF40YNL288W LSM2P38203 95 aaKnown RBP4.69□□□□□ -1.66
CAF40YNL288W GLE2P40066 365 aa4.69□□□□□ -1.66
CAF40YNL288W TDA4P47153 279 aa4.69□□□□□ -1.66
CAF40YNL288W DSK2P48510 373 aa4.69□□□□□ -1.66
CAF40YNL288W MRX11Q03079 207 aa4.69□□□□□ -1.66
CAF40YNL288W VPS71Q03433 280 aa4.69□□□□□ -1.66
CAF40YNL288W TRI1Q05024 226 aa4.69□□□□□ -1.66
CAF40YNL288W YPR013CQ12145 317 aa4.69□□□□□ -1.66
CAF40YNL288W PAU1P0CE88 120 aa4.68□□□□□ -1.66
CAF40YNL288W PAU14P0CE89 120 aa4.68□□□□□ -1.66
CAF40YNL288W PAU6P0CE90 120 aa4.68□□□□□ -1.66
CAF40YNL288W PAU18P0CE91 120 aa4.68□□□□□ -1.66
CAF40YNL288W PAU8P0CE92 120 aa4.68□□□□□ -1.66
CAF40YNL288W PAU11P0CE93 120 aa4.68□□□□□ -1.66
CAF40YNL288W DDI2P0CH63 225 aa4.68□□□□□ -1.66
CAF40YNL288W DDI3P0CH64 225 aa4.68□□□□□ -1.66
CAF40YNL288W RIB5P38145 238 aa4.68□□□□□ -1.66
CAF40YNL288W PAU13P38725 120 aa4.68□□□□□ -1.66
CAF40YNL288W LOC1P43586 204 aaPredicted RBP4.68□□□□□ -1.66
CAF40YNL288W AIM24P47127 394 aa4.68□□□□□ -1.66
CAF40YNL288W FYV6P53913 173 aa4.68□□□□□ -1.66
CAF40YNL288W YDR274CP87283 123 aa4.68□□□□□ -1.66
CAF40YNL288W PAU10Q03050 120 aa4.68□□□□□ -1.66
CAF40YNL288W IZH1Q03419 316 aa4.68□□□□□ -1.66
CAF40YNL288W PAU20Q08322 120 aa4.68□□□□□ -1.66
CAF40YNL288W FIT2Q08906 153 aa4.68□□□□□ -1.66
CAF40YNL288W YPL162CQ12042 273 aa4.68□□□□□ -1.66
CAF40YNL288W ATX2Q12067 313 aa4.68□□□□□ -1.66
CAF40YNL288W PAU9Q3E770 120 aa4.68□□□□□ -1.66
CAF40YNL288W VMA9Q3E7B6 73 aa4.68□□□□□ -1.66
CAF40YNL288W TAR1Q8TGM6 124 aa4.68□□□□□ -1.66
CAF40YNL288W MRP2P10663 115 aaPredicted RBP4.67□□□□□ -1.66
CAF40YNL288W LDS1P31379 325 aa4.67□□□□□ -1.66
CAF40YNL288W HMX1P32339 317 aa4.67□□□□□ -1.66
CAF40YNL288W RPL14AP36105 138 aaKnown RBP4.67□□□□□ -1.66
CAF40YNL288W TRS20P38334 175 aa4.67□□□□□ -1.66
CAF40YNL288W RPL14BP38754 138 aaKnown RBP4.67□□□□□ -1.66
CAF40YNL288W MST28P39552 234 aa4.67□□□□□ -1.66
CAF40YNL288W GPI2P46961 280 aa4.67□□□□□ -1.66
CAF40YNL288W MST27P53176 234 aa4.67□□□□□ -1.66
CAF40YNL288W ALG13P53178 202 aa4.67□□□□□ -1.66
CAF40YNL288W GRH1Q04410 372 aaKnown RBP4.67□□□□□ -1.66
CAF40YNL288W MRS1P07266 363 aa4.66□□□□□ -1.66
CAF40YNL288W RPS22AP0C0W1 130 aaKnown RBP4.66□□□□□ -1.66
CAF40YNL288W MRPL20P22354 195 aaPredicted RBP4.66□□□□□ -1.66
CAF40YNL288W SRB6P32570 121 aa4.66□□□□□ -1.66
CAF40YNL288W RPS0AP32905 252 aaKnown RBP4.66□□□□□ -1.66
CAF40YNL288W PHD1P36093 366 aa4.66□□□□□ -1.66
CAF40YNL288W ECM33P38248 429 aaKnown RBP4.66□□□□□ -1.66
CAF40YNL288W MCM22P47167 239 aa4.66□□□□□ -1.66
CAF40YNL288W LOA1Q06508 300 aa4.66□□□□□ -1.66
CAF40YNL288W YPR145C-AQ2V2P0 78 aa4.66□□□□□ -1.66
CAF40YNL288W RPB3P16370 318 aaKnown RBP4.65□□□□□ -1.67
CAF40YNL288W SEC59P20048 519 aa4.65□□□□□ -1.67
CAF40YNL288W RNA15P25299 296 aaPredicted RBP4.65□□□□□ -1.67
CAF40YNL288W YHR173CP38864 112 aa4.65□□□□□ -1.67
CAF40YNL288W CYB5P40312 120 aa4.65□□□□□ -1.67
CAF40YNL288W SIM1P40472 476 aa4.65□□□□□ -1.67
CAF40YNL288W YIP3P53633 176 aa4.65□□□□□ -1.67
CAF40YNL288W YLR281CQ05863 155 aa4.65□□□□□ -1.67
CAF40YNL288W GEP3Q08622 556 aa4.65□□□□□ -1.67
CAF40YNL288W YNL146C-AQ3E7Z1 64 aa4.65□□□□□ -1.67
CAF40YNL288W MBB1P39534 108 aa4.64□□□□□ -1.67
CAF40YNL288W LCB3P47013 409 aa4.64□□□□□ -1.67
CAF40YNL288W YOL160WQ08321 113 aa4.64□□□□□ -1.67
CAF40YNL288W YPR063CQ12160 140 aa4.64□□□□□ -1.67
CAF40YNL288W HAM1P47119 197 aaKnown RBP4.63□□□□□ -1.67
CAF40YNL288W MIC26P50087 233 aa4.63□□□□□ -1.67
CAF40YNL288W ERV2Q12284 196 aa4.63□□□□□ -1.67
CAF40YNL288W YOR011W-AQ3E807 68 aa4.63□□□□□ -1.67
CAF40YNL288W POG1P40473 351 aa4.62□□□□□ -1.67
CAF40YNL288W PHS1P40857 217 aa4.62□□□□□ -1.67
CAF40YNL288W YDL183CP48569 320 aa4.62□□□□□ -1.67
CAF40YNL288W TOM7P53507 60 aa4.62□□□□□ -1.67
CAF40YNL288W RAV2Q03956 351 aa4.62□□□□□ -1.67
CAF40YNL288W MSC3Q05812 728 aa4.62□□□□□ -1.67
CAF40YNL288W PRM7Q12459 698 aa4.62□□□□□ -1.67
CAF40YNL288W PCC1Q3E833 88 aa4.62□□□□□ -1.67
CAF40YNL288W HTB2P02294 131 aa4.61□□□□□ -1.67
CAF40YNL288W AME1P38313 324 aa4.61□□□□□ -1.67
CAF40YNL288W YIL024CP40543 189 aa4.61□□□□□ -1.67
CAF40YNL288W YGR025WP53216 100 aa4.61□□□□□ -1.67
CAF40YNL288W MRPS8Q03799 155 aa4.61□□□□□ -1.67
Retrieved 100 of 5,963 RNA–protein pairs in 15.4 ms