RNA–Protein interactions for RNA: YLR164W

SHH4, Transcript of Putative alternate subunit of succinate dehydrogenase (SDH), yeastyeast

Gene SHH4, Length 507 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHH4YLR164W YIL077CP40508 320 aa7.8□□□□□ -1.16
SHH4YLR164W LCB3P47013 409 aa7.8□□□□□ -1.16
SHH4YLR164W LRS4Q04087 347 aaKnown RBP7.8□□□□□ -1.16
SHH4YLR164W YLR118CQ12354 227 aa7.8□□□□□ -1.16
SHH4YLR164W MRPL23Q12487 163 aaPredicted RBP7.8□□□□□ -1.16
SHH4YLR164W DDI2P0CH63 225 aa7.79□□□□□ -1.16
SHH4YLR164W DDI3P0CH64 225 aa7.79□□□□□ -1.16
SHH4YLR164W RPB3P16370 318 aaKnown RBP7.79□□□□□ -1.16
SHH4YLR164W ACP1P32463 125 aa7.79□□□□□ -1.16
SHH4YLR164W YKL075CP36083 450 aa7.79□□□□□ -1.16
SHH4YLR164W SDH4P37298 181 aa7.79□□□□□ -1.16
SHH4YLR164W YBR013CP38215 129 aa7.79□□□□□ -1.16
SHH4YLR164W SRP14P38985 146 aa7.79□□□□□ -1.16
SHH4YLR164W PGD1P40356 397 aa7.79□□□□□ -1.16
SHH4YLR164W POR2P40478 281 aa7.79□□□□□ -1.16
SHH4YLR164W MOT3P54785 490 aaKnown RBP7.79□□□□□ -1.16
SHH4YLR164W DAD3P69850 94 aa7.79□□□□□ -1.16
SHH4YLR164W MRX11Q03079 207 aa7.79□□□□□ -1.16
SHH4YLR164W NAT3Q06504 195 aa7.79□□□□□ -1.16
SHH4YLR164W SAP30P38429 201 aa7.78□□□□□ -1.16
SHH4YLR164W YNL194CP40169 301 aa7.78□□□□□ -1.16
SHH4YLR164W CYB5P40312 120 aa7.78□□□□□ -1.16
SHH4YLR164W GPI2P46961 280 aa7.78□□□□□ -1.16
SHH4YLR164W CAX4P53223 239 aa7.78□□□□□ -1.16
SHH4YLR164W NCE103P53615 221 aa7.78□□□□□ -1.16
SHH4YLR164W POF1P25576 258 aa7.77□□□□□ -1.17
SHH4YLR164W SRP21P32342 167 aa7.77□□□□□ -1.17
SHH4YLR164W ICS2P38284 255 aa7.77□□□□□ -1.17
SHH4YLR164W PAU15P40585 124 aa7.77□□□□□ -1.17
SHH4YLR164W ATG39Q06159 398 aa7.77□□□□□ -1.17
SHH4YLR164W YOL160WQ08321 113 aa7.77□□□□□ -1.17
SHH4YLR164W MRS1P07266 363 aa7.76□□□□□ -1.17
SHH4YLR164W MBB1P39534 108 aa7.76□□□□□ -1.17
SHH4YLR164W YMR141CP40211 102 aa7.76□□□□□ -1.17
SHH4YLR164W AGE2P40529 298 aa7.76□□□□□ -1.17
SHH4YLR164W RPA43P46669 326 aa7.76□□□□□ -1.17
SHH4YLR164W FMP49A0A023PZB3 126 aa7.75□□□□□ -1.17
SHH4YLR164W YER190C-BP0CX94 160 aa7.75□□□□□ -1.17
SHH4YLR164W YEL077W-AP0CX95 160 aa7.75□□□□□ -1.17
SHH4YLR164W YGR296C-BP0CX96 160 aa7.75□□□□□ -1.17
SHH4YLR164W YPL283W-BP0CX97 160 aa7.75□□□□□ -1.17
SHH4YLR164W YPR204C-AP0CX98 160 aa7.75□□□□□ -1.17
SHH4YLR164W YFL068WP0CX99 160 aa7.75□□□□□ -1.17
SHH4YLR164W YLL066W-AP0CY00 160 aa7.75□□□□□ -1.17
SHH4YLR164W YLL067W-AP0CY01 160 aa7.75□□□□□ -1.17
SHH4YLR164W MST28P39552 234 aa7.75□□□□□ -1.17
SHH4YLR164W YPI1P43587 155 aa7.75□□□□□ -1.17
SHH4YLR164W YDL186WP48568 277 aa7.75□□□□□ -1.17
SHH4YLR164W MST27P53176 234 aa7.75□□□□□ -1.17
SHH4YLR164W YGR026WP53217 278 aa7.75□□□□□ -1.17
SHH4YLR164W FYV6P53913 173 aa7.75□□□□□ -1.17
SHH4YLR164W ATX2Q12067 313 aa7.75□□□□□ -1.17
SHH4YLR164W ERS1P17261 260 aa7.74□□□□□ -1.17
SHH4YLR164W FZF1P32805 299 aa7.74□□□□□ -1.17
SHH4YLR164W MGA1P53050 456 aa7.74□□□□□ -1.17
SHH4YLR164W IZH1Q03419 316 aa7.74□□□□□ -1.17
SHH4YLR164W TAR1Q8TGM6 124 aa7.74□□□□□ -1.17
SHH4YLR164W DYN1P36022 4092 aa7.74□□□□□ -1.17
SHH4YLR164W HTB2P02294 131 aa7.73□□□□□ -1.17
SHH4YLR164W YHR212W-AP0CX91 67 aa7.73□□□□□ -1.17
SHH4YLR164W GET2P40056 285 aa7.73□□□□□ -1.17
SHH4YLR164W UBC7Q02159 165 aa7.73□□□□□ -1.17
SHH4YLR164W NHP6AP11632 93 aaKnown RBP7.72□□□□□ -1.17
SHH4YLR164W PRY2P36110 329 aa7.72□□□□□ -1.17
SHH4YLR164W SNF11P38956 169 aa7.72□□□□□ -1.17
SHH4YLR164W MOG1P47123 218 aa7.72□□□□□ -1.17
SHH4YLR164W COX18P53239 316 aa7.72□□□□□ -1.17
SHH4YLR164W PRM3Q08931 133 aa7.72□□□□□ -1.17
SHH4YLR164W DCN1Q12395 269 aa7.72□□□□□ -1.17
SHH4YLR164W YOP1Q12402 180 aa7.72□□□□□ -1.17
SHH4YLR164W COX2P00410 251 aa7.71□□□□□ -1.18
SHH4YLR164W PRE9P23638 258 aaKnown RBP7.71□□□□□ -1.18
SHH4YLR164W YGL010WP25338 174 aa7.71□□□□□ -1.18
SHH4YLR164W CMC1P36064 111 aa7.71□□□□□ -1.18
SHH4YLR164W HSP10P38910 106 aa7.71□□□□□ -1.18
SHH4YLR164W GTT1P40582 234 aa7.71□□□□□ -1.18
SHH4YLR164W HAM1P47119 197 aaKnown RBP7.71□□□□□ -1.18
SHH4YLR164W SMT3Q12306 101 aaKnown RBP7.71□□□□□ -1.18
SHH4YLR164W YCL001W-BQ96VH2 84 aa7.71□□□□□ -1.18
SHH4YLR164W ATP19P81451 68 aa7.7□□□□□ -1.18
SHH4YLR164W PRM7Q12459 698 aa7.7□□□□□ -1.18
SHH4YLR164W MRPL33P20084 86 aa7.69□□□□□ -1.18
SHH4YLR164W QRI5P32344 111 aa7.69□□□□□ -1.18
SHH4YLR164W PAM17P36147 197 aa7.69□□□□□ -1.18
SHH4YLR164W SIM1P40472 476 aa7.69□□□□□ -1.18
SHH4YLR164W DAD4P69851 72 aa7.69□□□□□ -1.18
SHH4YLR164W SNU23Q12368 194 aaPredicted RBP7.69□□□□□ -1.18
SHH4YLR164W YOR011W-AQ3E807 68 aa7.69□□□□□ -1.18
SHH4YLR164W YGR035W-AQ45U48 73 aa7.69□□□□□ -1.18
SHH4YLR164W CUP2P15315 225 aa7.68□□□□□ -1.18
SHH4YLR164W YPT10P38146 199 aa7.68□□□□□ -1.18
SHH4YLR164W MRPL49P40858 161 aaPredicted RBP7.68□□□□□ -1.18
SHH4YLR164W PAU5P43575 122 aa7.68□□□□□ -1.18
SHH4YLR164W ZEO1Q08245 113 aa7.68□□□□□ -1.18
SHH4YLR164W UTP20P35194 2493 aaKnown RBP7.68□□□□□ -1.18
SHH4YLR164W RPL31BP0C2H9 113 aaKnown RBP7.67□□□□□ -1.18
SHH4YLR164W TIR1P10863 254 aa7.67□□□□□ -1.18
SHH4YLR164W YKL102CP34249 101 aa7.67□□□□□ -1.18
SHH4YLR164W DAD2P36162 133 aa7.67□□□□□ -1.18
SHH4YLR164W PRE5P40302 234 aaKnown RBP7.67□□□□□ -1.18
Retrieved 100 of 5,963 RNA–protein pairs in 76.4 ms