RNA–Protein interactions for RNA: YKR043C

SHB17, Transcript of Sedoheptulose bisphosphatase involved in riboneogenesis, yeastyeast

Gene SHB17, Length 816 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHB17YKR043C YGR025WP53216 100 aa7.78□□□□□ -1.16
SHB17YKR043C TY1A-DR1Q03856 440 aa7.78□□□□□ -1.16
SHB17YKR043C ATC1Q04005 294 aa7.78□□□□□ -1.16
SHB17YKR043C TY1A-ML1Q04706 440 aaKnown RBP7.78□□□□□ -1.16
SHB17YKR043C IZH3Q07959 543 aa7.78□□□□□ -1.16
SHB17YKR043C TY1A-BRQ12217 440 aa7.78□□□□□ -1.16
SHB17YKR043C TY1A-NL2Q12470 440 aa7.78□□□□□ -1.16
SHB17YKR043C TY1A-GR2Q12485 440 aa7.78□□□□□ -1.16
SHB17YKR043C MDN1Q12019 4910 aaKnown RBP7.78□□□□□ -1.16
SHB17YKR043C TY1A-LR4P0C2I8 440 aaKnown RBP7.77□□□□□ -1.17
SHB17YKR043C TY1A-DR6P0CX70 440 aa7.77□□□□□ -1.17
SHB17YKR043C TY1A-ER1P0CX71 440 aa7.77□□□□□ -1.17
SHB17YKR043C TY1A-LR2P0CX72 440 aa7.77□□□□□ -1.17
SHB17YKR043C TY1A-PLP0CX73 440 aa7.77□□□□□ -1.17
SHB17YKR043C TY1A-JR1P0CX74 440 aa7.77□□□□□ -1.17
SHB17YKR043C TY1A-LR3P0CX75 440 aa7.77□□□□□ -1.17
SHB17YKR043C TY1A-ML2P0CX76 440 aa7.77□□□□□ -1.17
SHB17YKR043C YIL077CP40508 320 aa7.77□□□□□ -1.17
SHB17YKR043C MIC26P50087 233 aa7.77□□□□□ -1.17
SHB17YKR043C SNO1Q03144 224 aa7.77□□□□□ -1.17
SHB17YKR043C TY1A-GR1Q12085 440 aa7.77□□□□□ -1.17
SHB17YKR043C COX19Q3E731 98 aa7.77□□□□□ -1.17
SHB17YKR043C YOR011W-AQ3E807 68 aa7.77□□□□□ -1.17
SHB17YKR043C TY1A-PR3Q6Q5H1 440 aaKnown RBP7.77□□□□□ -1.17
SHB17YKR043C TY1A-OLQ92392 440 aaKnown RBP7.77□□□□□ -1.17
SHB17YKR043C DDI2P0CH63 225 aa7.76□□□□□ -1.17
SHB17YKR043C DDI3P0CH64 225 aa7.76□□□□□ -1.17
SHB17YKR043C RPS2P25443 254 aaKnown RBP7.76□□□□□ -1.17
SHB17YKR043C AUA1P32450 94 aa7.76□□□□□ -1.17
SHB17YKR043C ATG8P38182 117 aaRIP-Chip data7.76□□□□□ -1.17not detected
SHB17YKR043C SPC25P40014 221 aa7.76□□□□□ -1.17
SHB17YKR043C NSE4P43124 402 aa7.76□□□□□ -1.17
SHB17YKR043C IZH1Q03419 316 aa7.76□□□□□ -1.17
SHB17YKR043C HSP12P22943 109 aaKnown RBP7.75□□□□□ -1.17
SHB17YKR043C PRE9P23638 258 aaKnown RBP7.75□□□□□ -1.17
SHB17YKR043C ACP1P32463 125 aa7.75□□□□□ -1.17
SHB17YKR043C SMD3P43321 101 aaKnown RBP7.75□□□□□ -1.17
SHB17YKR043C YIP3P53633 176 aa7.75□□□□□ -1.17
SHB17YKR043C YOL160WQ08321 113 aa7.75□□□□□ -1.17
SHB17YKR043C FIT2Q08906 153 aa7.75□□□□□ -1.17
SHB17YKR043C YPR063CQ12160 140 aa7.75□□□□□ -1.17
SHB17YKR043C PRM7Q12459 698 aa7.75□□□□□ -1.17
SHB17YKR043C TRS20P38334 175 aa7.74□□□□□ -1.17
SHB17YKR043C TIM21P53220 239 aa7.74□□□□□ -1.17
SHB17YKR043C TMA23Q03525 211 aa7.74□□□□□ -1.17
SHB17YKR043C YPR145C-AQ2V2P0 78 aa7.74□□□□□ -1.17
SHB17YKR043C MRX11Q03079 207 aa7.73□□□□□ -1.17
SHB17YKR043C YNL146C-AQ3E7Z1 64 aa7.73□□□□□ -1.17
SHB17YKR043C RPS8AP0CX39 200 aaKnown RBP7.72□□□□□ -1.17
SHB17YKR043C RPS8BP0CX40 200 aaKnown RBP7.72□□□□□ -1.17
SHB17YKR043C YRA2P36036 203 aaKnown RBP RIP-Chip data7.72□□□□□ -1.17not detected
SHB17YKR043C RPL14AP36105 138 aaKnown RBP7.72□□□□□ -1.17
SHB17YKR043C MRPL4P36517 319 aa7.72□□□□□ -1.17
SHB17YKR043C RPL14BP38754 138 aaKnown RBP7.72□□□□□ -1.17
SHB17YKR043C LOC1P43586 204 aaPredicted RBP7.72□□□□□ -1.17
SHB17YKR043C SME1Q12330 94 aaPredicted RBP7.72□□□□□ -1.17
SHB17YKR043C ADH3P07246 375 aaKnown RBP7.71□□□□□ -1.18
SHB17YKR043C PHD1P36093 366 aa7.71□□□□□ -1.18
SHB17YKR043C MBB1P39534 108 aa7.71□□□□□ -1.18
SHB17YKR043C VMA21P41806 77 aa7.71□□□□□ -1.18
SHB17YKR043C DAN1P47178 298 aa7.71□□□□□ -1.18
SHB17YKR043C DUO1P53168 247 aaKnown RBP7.71□□□□□ -1.18
SHB17YKR043C PAU4P53427 120 aa7.71□□□□□ -1.18
SHB17YKR043C YMR244WQ04018 355 aa7.71□□□□□ -1.18
SHB17YKR043C FRS1P15624 595 aaKnown RBP7.7□□□□□ -1.18
SHB17YKR043C NRG2P38082 220 aa7.7□□□□□ -1.18
SHB17YKR043C RIB5P38145 238 aa7.7□□□□□ -1.18
SHB17YKR043C YMR253CQ04835 414 aa7.7□□□□□ -1.18
SHB17YKR043C GEP3Q08622 556 aa7.7□□□□□ -1.18
SHB17YKR043C YPL162CQ12042 273 aa7.7□□□□□ -1.18
SHB17YKR043C ATX2Q12067 313 aa7.7□□□□□ -1.18
SHB17YKR043C RPB3P16370 318 aaKnown RBP7.69□□□□□ -1.18
SHB17YKR043C SEC59P20048 519 aa7.69□□□□□ -1.18
SHB17YKR043C SCW10Q04951 389 aa7.69□□□□□ -1.18
SHB17YKR043C MRS1P07266 363 aa7.68□□□□□ -1.18
SHB17YKR043C MLF3P32047 452 aa7.68□□□□□ -1.18
SHB17YKR043C NNK1P36003 928 aa7.68□□□□□ -1.18
SHB17YKR043C YER135CP40082 130 aa7.68□□□□□ -1.18
SHB17YKR043C PAU15P40585 124 aa7.68□□□□□ -1.18
SHB17YKR043C COX12Q01519 83 aa7.68□□□□□ -1.18
SHB17YKR043C MRPS8Q03799 155 aa7.68□□□□□ -1.18
SHB17YKR043C LOA1Q06508 300 aa7.68□□□□□ -1.18
SHB17YKR043C PAU1P0CE88 120 aa7.67□□□□□ -1.18
SHB17YKR043C PAU14P0CE89 120 aa7.67□□□□□ -1.18
SHB17YKR043C PAU6P0CE90 120 aa7.67□□□□□ -1.18
SHB17YKR043C PAU18P0CE91 120 aa7.67□□□□□ -1.18
SHB17YKR043C PAU8P0CE92 120 aa7.67□□□□□ -1.18
SHB17YKR043C PAU11P0CE93 120 aa7.67□□□□□ -1.18
SHB17YKR043C RNA15P25299 296 aaPredicted RBP7.67□□□□□ -1.18
SHB17YKR043C PAU13P38725 120 aa7.67□□□□□ -1.18
SHB17YKR043C YHR173CP38864 112 aa7.67□□□□□ -1.18
SHB17YKR043C PRE5P40302 234 aaKnown RBP7.67□□□□□ -1.18
SHB17YKR043C TOM7P53507 60 aa7.67□□□□□ -1.18
SHB17YKR043C ARL3Q02804 198 aa7.67□□□□□ -1.18
SHB17YKR043C PAU10Q03050 120 aa7.67□□□□□ -1.18
SHB17YKR043C PAU20Q08322 120 aa7.67□□□□□ -1.18
SHB17YKR043C PAU9Q3E770 120 aa7.67□□□□□ -1.18
SHB17YKR043C POF1P25576 258 aa7.66□□□□□ -1.18
SHB17YKR043C HMX1P32339 317 aa7.66□□□□□ -1.18
SHB17YKR043C MIG3P39943 394 aa7.66□□□□□ -1.18
Retrieved 100 of 5,963 RNA–protein pairs in 28.8 ms