RNA–Protein interactions for RNA: YHR099W

TRA1, Transcript of Subunit of SAGA and NuA4 histone acetyltransferase complexes, yeastyeast

Gene TRA1, Length 11,235 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRA1YHR099W ADH2P00331 348 aaKnown RBP2.14□□□□□ -2.07
TRA1YHR099W YFL068WP0CX99 160 aa2.14□□□□□ -2.07
TRA1YHR099W YLL066W-AP0CY00 160 aa2.14□□□□□ -2.07
TRA1YHR099W YLL067W-AP0CY01 160 aa2.14□□□□□ -2.07
TRA1YHR099W TOM40P23644 387 aaKnown RBP2.14□□□□□ -2.07
TRA1YHR099W MIC12P38341 106 aa2.14□□□□□ -2.07
TRA1YHR099W RHO3Q00245 231 aaKnown RBP2.14□□□□□ -2.07
TRA1YHR099W YLR422WQ06409 1932 aa2.14□□□□□ -2.07
TRA1YHR099W HRB1P38922 454 aaKnown RBP RIP-Chip data2.14□□□□□ -2.07not detected
TRA1YHR099W RPS14BP39516 138 aaKnown RBP2.14□□□□□ -2.07
TRA1YHR099W RPS16AP0CX51 143 aaKnown RBP2.14□□□□□ -2.07
TRA1YHR099W RPS16BP0CX52 143 aaKnown RBP2.14□□□□□ -2.07
TRA1YHR099W STE18P18852 110 aa2.14□□□□□ -2.07
TRA1YHR099W NCE103P53615 221 aa2.14□□□□□ -2.07
TRA1YHR099W MRH1Q12117 320 aaPredicted RBP2.14□□□□□ -2.07
TRA1YHR099W YRF1-3P0CX14 1859 aa2.14□□□□□ -2.07
TRA1YHR099W YRF1-7P0CX15 1859 aa2.14□□□□□ -2.07
TRA1YHR099W YRF1-6P53819 1859 aa2.14□□□□□ -2.07
TRA1YHR099W FLO11P08640 1367 aa2.14□□□□□ -2.07
TRA1YHR099W YKL070WP36087 169 aa2.14□□□□□ -2.07
TRA1YHR099W YEL028WP39989 153 aa2.14□□□□□ -2.07
TRA1YHR099W YGL149WP53116 101 aa2.14□□□□□ -2.07
TRA1YHR099W YGR151CP53287 111 aa2.14□□□□□ -2.07
TRA1YHR099W YMR321CQ04898 105 aa2.14□□□□□ -2.07
TRA1YHR099W YOL014WQ08110 124 aa2.14□□□□□ -2.07
TRA1YHR099W DGA1Q08650 418 aa2.14□□□□□ -2.07
TRA1YHR099W YDL009CQ12210 107 aa2.14□□□□□ -2.07
TRA1YHR099W IMG1P25626 169 aa2.14□□□□□ -2.07
TRA1YHR099W SMP1P38128 452 aa2.14□□□□□ -2.07
TRA1YHR099W SAP30P38429 201 aa2.14□□□□□ -2.07
TRA1YHR099W RPP1P38786 293 aa2.14□□□□□ -2.07
TRA1YHR099W REE1P40893 198 aa2.14□□□□□ -2.07
TRA1YHR099W PRY3P47033 881 aa2.14□□□□□ -2.07
TRA1YHR099W RFU1Q08003 200 aa2.14□□□□□ -2.07
TRA1YHR099W YOR072WQ08486 104 aa2.14□□□□□ -2.07
TRA1YHR099W ENV10Q99382 181 aa2.14□□□□□ -2.07
TRA1YHR099W PAU21P0CE86 164 aa2.14□□□□□ -2.07
TRA1YHR099W PAU22P0CE87 164 aa2.14□□□□□ -2.07
TRA1YHR099W HMRA1P0CY11 126 aa2.14□□□□□ -2.07
TRA1YHR099W STP3Q05937 343 aa2.14□□□□□ -2.07
TRA1YHR099W YLR302CO13544 120 aa2.13□□□□□ -2.07
TRA1YHR099W GAS1P22146 559 aaKnown RBP2.13□□□□□ -2.07
TRA1YHR099W YIL054WP40524 105 aa2.13□□□□□ -2.07
TRA1YHR099W PHS1P40857 217 aa2.13□□□□□ -2.07
TRA1YHR099W TPC1P53257 314 aa2.13□□□□□ -2.07
TRA1YHR099W LEE1Q02799 301 aaKnown RBP2.13□□□□□ -2.07
TRA1YHR099W MIC10Q96VH5 97 aa2.13□□□□□ -2.07
TRA1YHR099W YCR023CP25351 611 aa2.13□□□□□ -2.07
TRA1YHR099W YKR070WP36151 352 aaKnown RBP2.13□□□□□ -2.07
TRA1YHR099W MSY1P48527 492 aa2.13□□□□□ -2.07
TRA1YHR099W ECM29P38737 1868 aa2.13□□□□□ -2.07
TRA1YHR099W YMR316C-AI2HB70 103 aa2.13□□□□□ -2.07
TRA1YHR099W ADH1P00330 348 aaKnown RBP2.13□□□□□ -2.07
TRA1YHR099W HTB2P02294 131 aa2.13□□□□□ -2.07
TRA1YHR099W CTA1P15202 515 aa2.13□□□□□ -2.07
TRA1YHR099W YIL165CP40446 119 aa2.13□□□□□ -2.07
TRA1YHR099W ARC15P40518 154 aaRIP-Chip data2.13□□□□□ -2.07not detected
TRA1YHR099W YFR020WP43600 232 aa2.13□□□□□ -2.07
TRA1YHR099W SDC1Q03323 175 aa2.13□□□□□ -2.07
TRA1YHR099W COA4Q05809 96 aa2.13□□□□□ -2.07
TRA1YHR099W FMP16Q12497 93 aa2.13□□□□□ -2.07
TRA1YHR099W MRS3P10566 314 aa2.13□□□□□ -2.07
TRA1YHR099W MRPL31P14063 131 aaPredicted RBP2.13□□□□□ -2.07
TRA1YHR099W TOA2P32774 122 aa2.13□□□□□ -2.07
TRA1YHR099W YBL029WP38201 376 aa2.13□□□□□ -2.07
TRA1YHR099W ERG28P40030 148 aa2.13□□□□□ -2.07
TRA1YHR099W DFG10P40526 253 aa2.13□□□□□ -2.07
TRA1YHR099W YDR209CQ03480 137 aa2.13□□□□□ -2.07
TRA1YHR099W SPG4Q04438 115 aa2.13□□□□□ -2.07
TRA1YHR099W VAM10Q08474 114 aa2.13□□□□□ -2.07
TRA1YHR099W YOR020W-AQ3E824 90 aa2.13□□□□□ -2.07
TRA1YHR099W RPL36BO14455 100 aaKnown RBP2.13□□□□□ -2.07
TRA1YHR099W RPL36AP05745 100 aaPredicted RBP2.13□□□□□ -2.07
TRA1YHR099W MIC27P50945 234 aa2.13□□□□□ -2.07
TRA1YHR099W ERG26P53199 349 aaKnown RBP2.13□□□□□ -2.07
TRA1YHR099W ATP23P53722 227 aa2.13□□□□□ -2.07
TRA1YHR099W POS5Q06892 414 aa2.13□□□□□ -2.07
TRA1YHR099W SGA1P08019 549 aa2.13□□□□□ -2.07
TRA1YHR099W DDI2P0CH63 225 aa2.13□□□□□ -2.07
TRA1YHR099W DDI3P0CH64 225 aa2.13□□□□□ -2.07
TRA1YHR099W MRPL33P20084 86 aa2.13□□□□□ -2.07
TRA1YHR099W MRPS5P33759 307 aa2.13□□□□□ -2.07
TRA1YHR099W YIL102CP40488 101 aa2.13□□□□□ -2.07
TRA1YHR099W CDC1P40986 491 aa2.13□□□□□ -2.07
TRA1YHR099W YHC1Q05900 231 aaKnown RBP2.13□□□□□ -2.07
TRA1YHR099W PIN3Q06449 215 aa2.13□□□□□ -2.07
TRA1YHR099W POC4Q12245 148 aaPredicted RBP2.13□□□□□ -2.07
TRA1YHR099W RPL42AP0CX27 106 aaKnown RBP2.13□□□□□ -2.07
TRA1YHR099W RPL42BP0CX28 106 aaKnown RBP2.13□□□□□ -2.07
TRA1YHR099W UMP1P38293 148 aa2.13□□□□□ -2.07
TRA1YHR099W MBA1P38300 278 aa2.13□□□□□ -2.07
TRA1YHR099W SAS2P40963 338 aa2.13□□□□□ -2.07
TRA1YHR099W CRC1Q12289 327 aa2.13□□□□□ -2.07
TRA1YHR099W YEL009C-AA0A023PZF2 135 aa2.12□□□□□ -2.07
TRA1YHR099W FPR2P32472 135 aa2.12□□□□□ -2.07
TRA1YHR099W RPB7P34087 171 aa2.12□□□□□ -2.07
TRA1YHR099W YPL073CP40323 161 aa2.12□□□□□ -2.07
TRA1YHR099W PRM10P42946 383 aa2.12□□□□□ -2.07
TRA1YHR099W MRX11Q03079 207 aa2.12□□□□□ -2.07
TRA1YHR099W YLR358CO13565 187 aa2.12□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 27.6 ms