RNA–Protein interactions for RNA: YGR119C

NUP57, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP57, Length 1,626 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP57YGR119C NAT5Q08689 176 aa5.89□□□□□ -1.47
NUP57YGR119C HMRA1P0CY11 126 aa5.88□□□□□ -1.47
NUP57YGR119C CUP2P15315 225 aa5.88□□□□□ -1.47
NUP57YGR119C QRI5P32344 111 aa5.88□□□□□ -1.47
NUP57YGR119C MIX23P38162 196 aa5.88□□□□□ -1.47
NUP57YGR119C UIP3P39547 235 aa5.88□□□□□ -1.47
NUP57YGR119C YMR166CQ03829 368 aa5.88□□□□□ -1.47
NUP57YGR119C YOS1Q3E834 85 aa5.88□□□□□ -1.47
NUP57YGR119C YCL001W-BQ96VH2 84 aa5.88□□□□□ -1.47
NUP57YGR119C FPR2P32472 135 aa5.88□□□□□ -1.47
NUP57YGR119C ICS2P38284 255 aa5.88□□□□□ -1.47
NUP57YGR119C TPT1Q12272 230 aaKnown RBP5.88□□□□□ -1.47
NUP57YGR119C PIS1P06197 220 aaKnown RBP5.87□□□□□ -1.47
NUP57YGR119C AME1P38313 324 aa5.87□□□□□ -1.47
NUP57YGR119C DOG1P38774 246 aa5.87□□□□□ -1.47
NUP57YGR119C YHR173CP38864 112 aa5.87□□□□□ -1.47
NUP57YGR119C YJL118WP47022 219 aa5.87□□□□□ -1.47
NUP57YGR119C YJL028WP47062 111 aa5.87□□□□□ -1.47
NUP57YGR119C ATP19P81451 68 aa5.87□□□□□ -1.47
NUP57YGR119C TIM10P87108 93 aa5.87□□□□□ -1.47
NUP57YGR119C FOL3Q12676 427 aaPredicted RBP5.87□□□□□ -1.47
NUP57YGR119C HEM4P06174 275 aa5.86□□□□□ -1.47
NUP57YGR119C YER190C-BP0CX94 160 aa5.86□□□□□ -1.47
NUP57YGR119C YEL077W-AP0CX95 160 aa5.86□□□□□ -1.47
NUP57YGR119C YGR296C-BP0CX96 160 aa5.86□□□□□ -1.47
NUP57YGR119C YPL283W-BP0CX97 160 aa5.86□□□□□ -1.47
NUP57YGR119C YPR204C-AP0CX98 160 aa5.86□□□□□ -1.47
NUP57YGR119C NOP1P15646 327 aaKnown RBP5.86□□□□□ -1.47
NUP57YGR119C HSP12P22943 109 aaKnown RBP5.86□□□□□ -1.47
NUP57YGR119C MIG1P27705 504 aa5.86□□□□□ -1.47
NUP57YGR119C PMU1P36069 295 aa5.86□□□□□ -1.47
NUP57YGR119C PRE5P40302 234 aaKnown RBP5.86□□□□□ -1.47
NUP57YGR119C SSU72P53538 206 aaPredicted RBP5.86□□□□□ -1.47
NUP57YGR119C YOL024WQ08172 172 aa5.86□□□□□ -1.47
NUP57YGR119C YER145C-AA0A023PYF4 145 aa5.85□□□□□ -1.47
NUP57YGR119C TIR1P10863 254 aa5.85□□□□□ -1.47
NUP57YGR119C VMA16P23968 213 aa5.85□□□□□ -1.47
NUP57YGR119C GSP1P32835 219 aaKnown RBP5.85□□□□□ -1.47
NUP57YGR119C GSP2P32836 220 aaKnown RBP5.85□□□□□ -1.47
NUP57YGR119C PIR5P46999 287 aa5.85□□□□□ -1.47
NUP57YGR119C SUR7P54003 302 aa5.85□□□□□ -1.47
NUP57YGR119C RAV2Q03956 351 aa5.85□□□□□ -1.47
NUP57YGR119C CNL1Q06333 122 aa5.85□□□□□ -1.47
NUP57YGR119C FIT2Q08906 153 aa5.85□□□□□ -1.47
NUP57YGR119C YNL162W-AQ3E7A8 72 aa5.85□□□□□ -1.47
NUP57YGR119C SEC4P07560 215 aaKnown RBP5.85□□□□□ -1.47
NUP57YGR119C DFR1P07807 211 aaKnown RBP RIP-Chip data5.85□□□□□ -1.47not detected
NUP57YGR119C RPS23AP0CX29 145 aaKnown RBP5.85□□□□□ -1.47
NUP57YGR119C RPS23BP0CX30 145 aa5.85□□□□□ -1.47
NUP57YGR119C TEM1P38987 245 aa5.85□□□□□ -1.47
NUP57YGR119C GAT3Q07928 141 aa5.85□□□□□ -1.47
NUP57YGR119C PAU23Q07987 124 aa5.85□□□□□ -1.47
NUP57YGR119C CSM4Q08955 156 aa5.85□□□□□ -1.47
NUP57YGR119C YDL157CQ12082 118 aa5.85□□□□□ -1.47
NUP57YGR119C PAU17Q12370 124 aa5.85□□□□□ -1.47
NUP57YGR119C HAP3P13434 144 aa5.84□□□□□ -1.47
NUP57YGR119C LDB16P25587 256 aa5.84□□□□□ -1.47
NUP57YGR119C TDA4P47153 279 aa5.84□□□□□ -1.47
NUP57YGR119C GIM5Q04493 163 aa5.84□□□□□ -1.47
NUP57YGR119C CSI2Q08054 341 aa5.84□□□□□ -1.47
NUP57YGR119C YOR029WQ12243 111 aa5.84□□□□□ -1.47
NUP57YGR119C ZRT1P32804 376 aa5.83□□□□□ -1.48
NUP57YGR119C BDH1P39714 382 aa5.83□□□□□ -1.48
NUP57YGR119C YGR018CP53211 109 aa5.83□□□□□ -1.48
NUP57YGR119C API2Q04413 109 aa5.83□□□□□ -1.48
NUP57YGR119C TVP18Q04767 167 aa5.83□□□□□ -1.48
NUP57YGR119C NDE2Q07500 545 aa5.83□□□□□ -1.48
NUP57YGR119C MEC1P38111 2368 aa5.83□□□□□ -1.48
NUP57YGR119C HTB1P02293 131 aaKnown RBP5.82□□□□□ -1.48
NUP57YGR119C RPL39P04650 51 aa5.82□□□□□ -1.48
NUP57YGR119C ATP10P18496 279 aa5.82□□□□□ -1.48
NUP57YGR119C UTR5P32630 166 aa5.82□□□□□ -1.48
NUP57YGR119C YBL071CP38185 102 aa5.82□□□□□ -1.48
NUP57YGR119C CSH1P38287 376 aa5.82□□□□□ -1.48
NUP57YGR119C YGP1P38616 354 aaKnown RBP5.82□□□□□ -1.48
NUP57YGR119C YGL118CP53132 145 aa5.82□□□□□ -1.48
NUP57YGR119C TOM7P53507 60 aa5.82□□□□□ -1.48
NUP57YGR119C YMR105W-AQ8TGS8 64 aa5.82□□□□□ -1.48
NUP57YGR119C YCR022CP25620 114 aa5.81□□□□□ -1.48
NUP57YGR119C DOG2P38773 246 aa5.81□□□□□ -1.48
NUP57YGR119C YNR064CP53750 290 aa5.81□□□□□ -1.48
NUP57YGR119C MRX11Q03079 207 aa5.81□□□□□ -1.48
NUP57YGR119C YTH1Q06102 208 aaPredicted RBP5.81□□□□□ -1.48
NUP57YGR119C YPL162CQ12042 273 aa5.81□□□□□ -1.48
NUP57YGR119C SOR1P35497 357 aaKnown RBP5.81□□□□□ -1.48
NUP57YGR119C HUA1P40325 198 aa5.81□□□□□ -1.48
NUP57YGR119C YGL230CP53074 147 aa5.81□□□□□ -1.48
NUP57YGR119C SDS23P53172 527 aa5.81□□□□□ -1.48
NUP57YGR119C CRZ1P53968 678 aa5.81□□□□□ -1.48
NUP57YGR119C SOR2Q07786 357 aa5.81□□□□□ -1.48
NUP57YGR119C YBR056W-AI2HB52 66 aa5.8□□□□□ -1.48
NUP57YGR119C MRS1P07266 363 aa5.8□□□□□ -1.48
NUP57YGR119C YCR007CP25354 239 aa5.8□□□□□ -1.48
NUP57YGR119C FZF1P32805 299 aa5.8□□□□□ -1.48
NUP57YGR119C MTR2P34232 184 aaKnown RBP5.8□□□□□ -1.48
NUP57YGR119C SFT2P38166 215 aa5.8□□□□□ -1.48
NUP57YGR119C LSM2P38203 95 aaKnown RBP5.8□□□□□ -1.48
NUP57YGR119C SEC72P39742 193 aaKnown RBP5.8□□□□□ -1.48
NUP57YGR119C LST8P41318 303 aa5.8□□□□□ -1.48
NUP57YGR119C YFL051CP43552 160 aa5.8□□□□□ -1.48
Retrieved 100 of 5,963 RNA–protein pairs in 104.9 ms