RNA–Protein interactions for RNA: YGL172W

NUP49, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP49, Length 1,419 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP49YGL172W IZH3Q07959 543 aa5.27□□□□□ -1.57
NUP49YGL172W RIB5P38145 238 aa5.26□□□□□ -1.57
NUP49YGL172W SDH8P38345 138 aa5.26□□□□□ -1.57
NUP49YGL172W MCM22P47167 239 aa5.26□□□□□ -1.57
NUP49YGL172W DSK2P48510 373 aa5.26□□□□□ -1.57
NUP49YGL172W CAX4P53223 239 aa5.26□□□□□ -1.57
NUP49YGL172W AYT1Q12226 474 aa5.26□□□□□ -1.57
NUP49YGL172W MIG1P27705 504 aa5.25□□□□□ -1.57
NUP49YGL172W ACP1P32463 125 aa5.25□□□□□ -1.57
NUP49YGL172W CMC1P36064 111 aa5.25□□□□□ -1.57
NUP49YGL172W GLE2P40066 365 aa5.25□□□□□ -1.57
NUP49YGL172W MRPL49P40858 161 aaPredicted RBP5.25□□□□□ -1.57
NUP49YGL172W IMP2P46972 177 aa5.25□□□□□ -1.57
NUP49YGL172W PAU4P53427 120 aa5.25□□□□□ -1.57
NUP49YGL172W OCA2P53949 197 aa5.25□□□□□ -1.57
NUP49YGL172W SDO1Q07953 250 aaKnown RBP5.25□□□□□ -1.57
NUP49YGL172W YPR013CQ12145 317 aa5.25□□□□□ -1.57
NUP49YGL172W HSP12P22943 109 aaKnown RBP5.24□□□□□ -1.57
NUP49YGL172W TIR2P33890 251 aa5.24□□□□□ -1.57
NUP49YGL172W YBR144CP34215 104 aa5.24□□□□□ -1.57
NUP49YGL172W TRS20P38334 175 aa5.24□□□□□ -1.57
NUP49YGL172W MST28P39552 234 aa5.24□□□□□ -1.57
NUP49YGL172W MST27P53176 234 aa5.24□□□□□ -1.57
NUP49YGL172W LDS2Q08218 356 aa5.24□□□□□ -1.57
NUP49YGL172W VMA9Q3E7B6 73 aa5.24□□□□□ -1.57
NUP49YGL172W PAU1P0CE88 120 aa5.23□□□□□ -1.57
NUP49YGL172W PAU14P0CE89 120 aa5.23□□□□□ -1.57
NUP49YGL172W PAU6P0CE90 120 aa5.23□□□□□ -1.57
NUP49YGL172W PAU18P0CE91 120 aa5.23□□□□□ -1.57
NUP49YGL172W PAU8P0CE92 120 aa5.23□□□□□ -1.57
NUP49YGL172W PAU11P0CE93 120 aa5.23□□□□□ -1.57
NUP49YGL172W ECM25P32525 599 aa5.23□□□□□ -1.57
NUP49YGL172W PAU13P38725 120 aa5.23□□□□□ -1.57
NUP49YGL172W LOC1P43586 204 aaPredicted RBP5.23□□□□□ -1.57
NUP49YGL172W UBC7Q02159 165 aa5.23□□□□□ -1.57
NUP49YGL172W PAU10Q03050 120 aa5.23□□□□□ -1.57
NUP49YGL172W PAU20Q08322 120 aa5.23□□□□□ -1.57
NUP49YGL172W PAU9Q3E770 120 aa5.23□□□□□ -1.57
NUP49YGL172W YER175W-AQ8TGU4 54 aa5.23□□□□□ -1.57
NUP49YGL172W SRB6P32570 121 aa5.23□□□□□ -1.57
NUP49YGL172W SNF11P38956 169 aa5.23□□□□□ -1.57
NUP49YGL172W UBC11P52492 156 aa5.23□□□□□ -1.57
NUP49YGL172W RRG8Q06109 277 aa5.23□□□□□ -1.57
NUP49YGL172W ATG39Q06159 398 aa5.23□□□□□ -1.57
NUP49YGL172W FIT2Q08906 153 aa5.23□□□□□ -1.57
NUP49YGL172W VMA16P23968 213 aa5.22□□□□□ -1.57
NUP49YGL172W HMX1P32339 317 aa5.22□□□□□ -1.57
NUP49YGL172W UTR5P32630 166 aa5.22□□□□□ -1.57
NUP49YGL172W DAD2P36162 133 aa5.22□□□□□ -1.57
NUP49YGL172W LOA1Q06508 300 aa5.22□□□□□ -1.57
NUP49YGL172W ERV2Q12284 196 aa5.22□□□□□ -1.57
NUP49YGL172W DDI2P0CH63 225 aa5.21□□□□□ -1.58
NUP49YGL172W DDI3P0CH64 225 aa5.21□□□□□ -1.58
NUP49YGL172W LDS1P31379 325 aa5.21□□□□□ -1.58
NUP49YGL172W ELF1P36053 145 aa5.21□□□□□ -1.58
NUP49YGL172W LCB3P47013 409 aa5.21□□□□□ -1.58
NUP49YGL172W AIM24P47127 394 aa5.21□□□□□ -1.58
NUP49YGL172W YGR025WP53216 100 aa5.21□□□□□ -1.58
NUP49YGL172W MRX11Q03079 207 aa5.21□□□□□ -1.58
NUP49YGL172W YOR011W-AQ3E807 68 aa5.21□□□□□ -1.58
NUP49YGL172W TAR1Q8TGM6 124 aa5.21□□□□□ -1.58
NUP49YGL172W RNA15P25299 296 aaPredicted RBP5.2□□□□□ -1.58
NUP49YGL172W ECM33P38248 429 aaKnown RBP5.2□□□□□ -1.58
NUP49YGL172W HUA1P40325 198 aa5.2□□□□□ -1.58
NUP49YGL172W SIM1P40472 476 aa5.2□□□□□ -1.58
NUP49YGL172W GPI2P46961 280 aa5.2□□□□□ -1.58
NUP49YGL172W HAM1P47119 197 aaKnown RBP5.2□□□□□ -1.58
NUP49YGL172W TOM7P53507 60 aa5.2□□□□□ -1.58
NUP49YGL172W IZH1Q03419 316 aa5.2□□□□□ -1.58
NUP49YGL172W VPS71Q03433 280 aa5.2□□□□□ -1.58
NUP49YGL172W YOL160WQ08321 113 aa5.2□□□□□ -1.58
NUP49YGL172W PHD1P36093 366 aa5.19□□□□□ -1.58
NUP49YGL172W MPC2P38857 129 aa5.19□□□□□ -1.58
NUP49YGL172W MBB1P39534 108 aa5.19□□□□□ -1.58
NUP49YGL172W TDA4P47153 279 aa5.19□□□□□ -1.58
NUP49YGL172W RAV2Q03956 351 aa5.19□□□□□ -1.58
NUP49YGL172W YMR253CQ04835 414 aa5.19□□□□□ -1.58
NUP49YGL172W COX2P00410 251 aa5.18□□□□□ -1.58
NUP49YGL172W YHR173CP38864 112 aa5.18□□□□□ -1.58
NUP49YGL172W YIL163CP40448 117 aa5.18□□□□□ -1.58
NUP49YGL172W ATX2Q12067 313 aa5.18□□□□□ -1.58
NUP49YGL172W PRM7Q12459 698 aa5.18□□□□□ -1.58
NUP49YGL172W MRS1P07266 363 aa5.17□□□□□ -1.58
NUP49YGL172W RPS22AP0C0W1 130 aaKnown RBP5.17□□□□□ -1.58
NUP49YGL172W RPB3P16370 318 aaKnown RBP5.17□□□□□ -1.58
NUP49YGL172W MDM10P18409 493 aa5.17□□□□□ -1.58
NUP49YGL172W YIP3P53633 176 aa5.17□□□□□ -1.58
NUP49YGL172W FYV6P53913 173 aa5.17□□□□□ -1.58
NUP49YGL172W SNO1Q03144 224 aa5.17□□□□□ -1.58
NUP49YGL172W GRH1Q04410 372 aaKnown RBP5.17□□□□□ -1.58
NUP49YGL172W ORM2Q06144 216 aa5.17□□□□□ -1.58
NUP49YGL172W GEP3Q08622 556 aa5.17□□□□□ -1.58
NUP49YGL172W PCC1Q3E833 88 aa5.17□□□□□ -1.58
NUP49YGL172W YPR053CQ6Q5F3 151 aa5.17□□□□□ -1.58
NUP49YGL172W HTB2P02294 131 aa5.16□□□□□ -1.58
NUP49YGL172W COQ3P27680 312 aa5.16□□□□□ -1.58
NUP49YGL172W YPT10P38146 199 aa5.16□□□□□ -1.58
NUP49YGL172W CYB5P40312 120 aa5.16□□□□□ -1.58
NUP49YGL172W YIL024CP40543 189 aa5.16□□□□□ -1.58
NUP49YGL172W HIT1P46973 164 aa5.16□□□□□ -1.58
Retrieved 100 of 5,963 RNA–protein pairs in 76.7 ms