RNA–Protein interactions for RNA: YEL027W

VMA3, Transcript of Proteolipid subunit c of the V0 domain of vacuolar H(+)-ATPase, yeast

Gene VMA3, Length 483 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VMA3	YEL027W	PAU15	P40585	124 aa		5.1	□□□□□ -1.59
VMA3	YEL027W	PAU10	Q03050	120 aa		5.1	□□□□□ -1.59
VMA3	YEL027W	CUE4	Q04201	117 aa	Predicted RBP	5.1	□□□□□ -1.59
VMA3	YEL027W	PAU20	Q08322	120 aa		5.1	□□□□□ -1.59
VMA3	YEL027W	ATX2	Q12067	313 aa		5.1	□□□□□ -1.59
VMA3	YEL027W	PAU9	Q3E770	120 aa		5.1	□□□□□ -1.59
VMA3	YEL027W	YIL002W-A	Q3E7Z5	69 aa		5.1	□□□□□ -1.59
VMA3	YEL027W	YCL001W-B	Q96VH2	84 aa		5.1	□□□□□ -1.59
VMA3	YEL027W	CYC3	P06182	269 aa		5.09	□□□□□ -1.59
VMA3	YEL027W	POP5	P28005	173 aa		5.09	□□□□□ -1.59
VMA3	YEL027W	SFT2	P38166	215 aa		5.09	□□□□□ -1.59
VMA3	YEL027W	YNL194C	P40169	301 aa		5.09	□□□□□ -1.59
VMA3	YEL027W	FIP1	P45976	327 aa		5.09	□□□□□ -1.59
VMA3	YEL027W	ATG27	P46989	271 aa		5.09	□□□□□ -1.59
VMA3	YEL027W	TOS8	P53147	276 aa		5.09	□□□□□ -1.59
VMA3	YEL027W	MRPL23	Q12487	163 aa	Predicted RBP	5.09	□□□□□ -1.59
VMA3	YEL027W	YHR213W	P0CI67	198 aa		5.08	□□□□□ -1.6
VMA3	YEL027W	FUN14	P18411	198 aa		5.08	□□□□□ -1.6
VMA3	YEL027W	HSP12	P22943	109 aa	Known RBP	5.08	□□□□□ -1.6
VMA3	YEL027W	LAC1	P28496	418 aa		5.08	□□□□□ -1.6
VMA3	YEL027W	LOC1	P43586	204 aa	Predicted RBP	5.08	□□□□□ -1.6
VMA3	YEL027W	DSK2	P48510	373 aa		5.08	□□□□□ -1.6
VMA3	YEL027W	BNS1	P50084	137 aa		5.08	□□□□□ -1.6
VMA3	YEL027W	HST4	P53688	370 aa		5.08	□□□□□ -1.6
VMA3	YEL027W	YNR071C	P53757	342 aa		5.08	□□□□□ -1.6
VMA3	YEL027W	CYT2	Q00873	224 aa		5.08	□□□□□ -1.6
VMA3	YEL027W	TIM18	Q08749	192 aa		5.08	□□□□□ -1.6
VMA3	YEL027W	PRM3	Q08931	133 aa		5.08	□□□□□ -1.6
VMA3	YEL027W	ERV2	Q12284	196 aa		5.08	□□□□□ -1.6
VMA3	YEL027W	ERG27	Q12452	347 aa	Known RBP	5.08	□□□□□ -1.6
VMA3	YEL027W	TY1A-H	P0C2I4	478 aa	Known RBP	5.07	□□□□□ -1.6
VMA3	YEL027W	PRE9	P23638	258 aa	Known RBP	5.07	□□□□□ -1.6
VMA3	YEL027W	VMA16	P23968	213 aa		5.07	□□□□□ -1.6
VMA3	YEL027W	RPS2	P25443	254 aa	Known RBP	5.07	□□□□□ -1.6
VMA3	YEL027W	MIG1	P27705	504 aa		5.07	□□□□□ -1.6
VMA3	YEL027W	AFR1	P33304	620 aa		5.07	□□□□□ -1.6
VMA3	YEL027W	TRS20	P38334	175 aa		5.07	□□□□□ -1.6
VMA3	YEL027W	POR2	P40478	281 aa		5.07	□□□□□ -1.6
VMA3	YEL027W	RPA43	P46669	326 aa		5.07	□□□□□ -1.6
VMA3	YEL027W	MGA1	P53050	456 aa		5.07	□□□□□ -1.6
VMA3	YEL027W	NCE103	P53615	221 aa		5.07	□□□□□ -1.6
VMA3	YEL027W	YMR181C	Q03231	154 aa		5.07	□□□□□ -1.6
VMA3	YEL027W	VPS71	Q03433	280 aa		5.07	□□□□□ -1.6
VMA3	YEL027W	AYT1	Q12226	474 aa		5.07	□□□□□ -1.6
VMA3	YEL027W	YLR118C	Q12354	227 aa		5.07	□□□□□ -1.6
VMA3	YEL027W	DDI2	P0CH63	225 aa		5.06	□□□□□ -1.6
VMA3	YEL027W	DDI3	P0CH64	225 aa		5.06	□□□□□ -1.6
VMA3	YEL027W	ERS1	P17261	260 aa		5.06	□□□□□ -1.6
VMA3	YEL027W	MSN1	P22148	382 aa		5.06	□□□□□ -1.6
VMA3	YEL027W	RNA15	P25299	296 aa	Predicted RBP	5.06	□□□□□ -1.6
VMA3	YEL027W	HMX1	P32339	317 aa		5.06	□□□□□ -1.6
VMA3	YEL027W	LSM2	P38203	95 aa	Known RBP	5.06	□□□□□ -1.6
VMA3	YEL027W	PHS1	P40857	217 aa		5.06	□□□□□ -1.6
VMA3	YEL027W	YPI1	P43587	155 aa		5.06	□□□□□ -1.6
VMA3	YEL027W	YJL027C	P47063	138 aa	Predicted RBP	5.06	□□□□□ -1.6
VMA3	YEL027W	COX18	P53239	316 aa		5.06	□□□□□ -1.6
VMA3	YEL027W	MRX11	Q03079	207 aa		5.06	□□□□□ -1.6
VMA3	YEL027W	LOA1	Q06508	300 aa		5.06	□□□□□ -1.6
VMA3	YEL027W	LDS2	Q08218	356 aa		5.06	□□□□□ -1.6
VMA3	YEL027W	TMA17	Q12513	150 aa		5.06	□□□□□ -1.6
VMA3	YEL027W	YNR034W-A	Q3E841	98 aa		5.06	□□□□□ -1.6
VMA3	YEL027W	YIL134C-A	Q45U18	67 aa		5.06	□□□□□ -1.6
VMA3	YEL027W	RPS22A	P0C0W1	130 aa	Known RBP	5.05	□□□□□ -1.6
VMA3	YEL027W	TIR2	P33890	251 aa		5.05	□□□□□ -1.6
VMA3	YEL027W	SNU13	P39990	126 aa	Known RBP	5.05	□□□□□ -1.6
VMA3	YEL027W	GLE2	P40066	365 aa		5.05	□□□□□ -1.6
VMA3	YEL027W	IMP2	P46972	177 aa		5.05	□□□□□ -1.6
VMA3	YEL027W	FIT2	Q08906	153 aa		5.05	□□□□□ -1.6
VMA3	YEL027W	LAS17	Q12446	633 aa		5.05	□□□□□ -1.6
VMA3	YEL027W	COA6	Q3E846	104 aa		5.05	□□□□□ -1.6
VMA3	YEL027W	COX2	P00410	251 aa		5.04	□□□□□ -1.6
VMA3	YEL027W	MRPS9	P38120	278 aa		5.04	□□□□□ -1.6
VMA3	YEL027W	YHR173C	P38864	112 aa		5.04	□□□□□ -1.6
VMA3	YEL027W	SNF11	P38956	169 aa		5.04	□□□□□ -1.6
VMA3	YEL027W	SUR2	P38992	349 aa		5.04	□□□□□ -1.6
VMA3	YEL027W	CYB5	P40312	120 aa		5.04	□□□□□ -1.6
VMA3	YEL027W	UBC7	Q02159	165 aa		5.04	□□□□□ -1.6
VMA3	YEL027W	YPR014C	Q6B0W2	109 aa		5.04	□□□□□ -1.6
VMA3	YEL027W	PAU19	P0CE85	124 aa		5.03	□□□□□ -1.6
VMA3	YEL027W	PAU21	P0CE86	164 aa		5.03	□□□□□ -1.6
VMA3	YEL027W	PAU22	P0CE87	164 aa		5.03	□□□□□ -1.6
VMA3	YEL027W	YHR212W-A	P0CX91	67 aa		5.03	□□□□□ -1.6
VMA3	YEL027W	PAU3	P25610	124 aa		5.03	□□□□□ -1.6
VMA3	YEL027W	COQ3	P27680	312 aa		5.03	□□□□□ -1.6
VMA3	YEL027W	NNK1	P36003	928 aa		5.03	□□□□□ -1.6
VMA3	YEL027W	YLR122C	Q12312	125 aa		5.03	□□□□□ -1.6
VMA3	YEL027W	MRS1	P07266	363 aa		5.02	□□□□□ -1.61
VMA3	YEL027W	YBR144C	P34215	104 aa		5.02	□□□□□ -1.61
VMA3	YEL027W	OST3	P48439	350 aa		5.02	□□□□□ -1.61
VMA3	YEL027W	FYV7	Q12247	151 aa		5.02	□□□□□ -1.61
VMA3	YEL027W	UIP3	P39547	235 aa		5.01	□□□□□ -1.61
VMA3	YEL027W	YGR149W	P48236	432 aa		5.01	□□□□□ -1.61
VMA3	YEL027W	DAD3	P69850	94 aa		5.01	□□□□□ -1.61
VMA3	YEL027W	IZH1	Q03419	316 aa		5.01	□□□□□ -1.61
VMA3	YEL027W	ATG39	Q06159	398 aa		5.01	□□□□□ -1.61
VMA3	YEL027W	YDL085C-A	Q3E7B7	68 aa	Known RBP	5.01	□□□□□ -1.61
VMA3	YEL027W	ATP5	P09457	212 aa		5	□□□□□ -1.61
VMA3	YEL027W	UTR5	P32630	166 aa		5	□□□□□ -1.61
VMA3	YEL027W	CMC1	P36064	111 aa		5	□□□□□ -1.61
VMA3	YEL027W	PHD1	P36093	366 aa		5	□□□□□ -1.61

Retrieved 100 of 5,963 RNA–protein pairs in 44 ms