RNA–Protein interactions for RNA: YCR021C

HSP30, Transcript of Negative regulator of the H(+)-ATPase Pma1p, yeast

Gene HSP30, Length 999 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HSP30	YCR021C	PSD1	P39006	500 aa		3.18	□□□□□ -1.9
HSP30	YCR021C	IRC22	P40006	225 aa		3.18	□□□□□ -1.9
HSP30	YCR021C	GET2	P40056	285 aa		3.18	□□□□□ -1.9
HSP30	YCR021C	GLE2	P40066	365 aa		3.18	□□□□□ -1.9
HSP30	YCR021C	YER188W	P40103	239 aa		3.18	□□□□□ -1.9
HSP30	YCR021C	AGE2	P40529	298 aa		3.18	□□□□□ -1.9
HSP30	YCR021C	ATG27	P46989	271 aa		3.18	□□□□□ -1.9
HSP30	YCR021C	LST7	P53237	242 aa		3.18	□□□□□ -1.9
HSP30	YCR021C	COX18	P53239	316 aa		3.18	□□□□□ -1.9
HSP30	YCR021C	PAU10	Q03050	120 aa		3.18	□□□□□ -1.9
HSP30	YCR021C	MHR1	Q06630	226 aa		3.18	□□□□□ -1.9
HSP30	YCR021C	PAU20	Q08322	120 aa		3.18	□□□□□ -1.9
HSP30	YCR021C	YPR013C	Q12145	317 aa		3.18	□□□□□ -1.9
HSP30	YCR021C	PAU9	Q3E770	120 aa		3.18	□□□□□ -1.9
HSP30	YCR021C	ATP5	P09457	212 aa		3.17	□□□□□ -1.9
HSP30	YCR021C	PHO85	P17157	305 aa		3.17	□□□□□ -1.9
HSP30	YCR021C	FUN14	P18411	198 aa		3.17	□□□□□ -1.9
HSP30	YCR021C	INO2	P26798	304 aa		3.17	□□□□□ -1.9
HSP30	YCR021C	TCA17	P32613	152 aa		3.17	□□□□□ -1.9
HSP30	YCR021C	LSM2	P38203	95 aa	Known RBP	3.17	□□□□□ -1.9
HSP30	YCR021C	BDH1	P39714	382 aa		3.17	□□□□□ -1.9
HSP30	YCR021C	DSK2	P48510	373 aa		3.17	□□□□□ -1.9
HSP30	YCR021C	RIB4	P50861	169 aa	Predicted RBP	3.17	□□□□□ -1.9
HSP30	YCR021C	MOT3	P54785	490 aa	Known RBP	3.17	□□□□□ -1.9
HSP30	YCR021C	SHH3	Q04487	196 aa		3.17	□□□□□ -1.9
HSP30	YCR021C	ATX2	Q12067	313 aa		3.17	□□□□□ -1.9
HSP30	YCR021C	YDL085C-A	Q3E7B7	68 aa	Known RBP	3.17	□□□□□ -1.9
HSP30	YCR021C	YNR034W-A	Q3E841	98 aa		3.17	□□□□□ -1.9
HSP30	YCR021C	UTP20	P35194	2493 aa	Known RBP	3.16	□□□□□ -1.9
HSP30	YCR021C	ILV5	P06168	395 aa	Known RBP	3.16	□□□□□ -1.9
HSP30	YCR021C	PIS1	P06197	220 aa	Known RBP	3.16	□□□□□ -1.9
HSP30	YCR021C	DFR1	P07807	211 aa	Known RBP RIP-Chip data	3.16	□□□□□ -1.9	not detected
HSP30	YCR021C	RPL31A	P0C2H8	113 aa	Known RBP	3.16	□□□□□ -1.9
HSP30	YCR021C	RPL31B	P0C2H9	113 aa	Known RBP	3.16	□□□□□ -1.9
HSP30	YCR021C	YHR213W	P0CI67	198 aa		3.16	□□□□□ -1.9
HSP30	YCR021C	QCR9	P22289	66 aa		3.16	□□□□□ -1.9
HSP30	YCR021C	DAL3	P32459	195 aa		3.16	□□□□□ -1.9
HSP30	YCR021C	YKL075C	P36083	450 aa		3.16	□□□□□ -1.9
HSP30	YCR021C	YBR090C	P38253	122 aa		3.16	□□□□□ -1.9
HSP30	YCR021C	DER1	P38307	211 aa		3.16	□□□□□ -1.9
HSP30	YCR021C	OST3	P48439	350 aa		3.16	□□□□□ -1.9
HSP30	YCR021C	SWT21	P53873	357 aa	Predicted RBP	3.16	□□□□□ -1.9
HSP30	YCR021C	APS2	Q00381	147 aa		3.16	□□□□□ -1.9
HSP30	YCR021C	YPS3	Q12303	508 aa		3.16	□□□□□ -1.9
HSP30	YCR021C	SME1	Q12330	94 aa	Predicted RBP	3.16	□□□□□ -1.9
HSP30	YCR021C	YNL162W-A	Q3E7A8	72 aa		3.16	□□□□□ -1.9
HSP30	YCR021C	YIL134C-A	Q45U18	67 aa		3.16	□□□□□ -1.9
HSP30	YCR021C	RPS22A	P0C0W1	130 aa	Known RBP	3.15	□□□□□ -1.91
HSP30	YCR021C	RPS2	P25443	254 aa	Known RBP	3.15	□□□□□ -1.91
HSP30	YCR021C	MRPL11	P36521	249 aa	Predicted RBP	3.15	□□□□□ -1.91
HSP30	YCR021C	YIL163C	P40448	117 aa		3.15	□□□□□ -1.91
HSP30	YCR021C	YJL027C	P47063	138 aa	Predicted RBP	3.15	□□□□□ -1.91
HSP30	YCR021C	VPS55	P47111	140 aa		3.15	□□□□□ -1.91
HSP30	YCR021C	TOS8	P53147	276 aa		3.15	□□□□□ -1.91
HSP30	YCR021C	CPD1	P53314	239 aa		3.15	□□□□□ -1.91
HSP30	YCR021C	SSU72	P53538	206 aa	Predicted RBP	3.15	□□□□□ -1.91
HSP30	YCR021C	BOR1	P53838	576 aa		3.15	□□□□□ -1.91
HSP30	YCR021C	SEN15	Q04675	128 aa		3.15	□□□□□ -1.91
HSP30	YCR021C	ERV2	Q12284	196 aa		3.15	□□□□□ -1.91
HSP30	YCR021C	ERG27	Q12452	347 aa	Known RBP	3.15	□□□□□ -1.91
HSP30	YCR021C	RPL15A	P05748	204 aa	Known RBP	3.14	□□□□□ -1.91
HSP30	YCR021C	VMA16	P23968	213 aa		3.14	□□□□□ -1.91
HSP30	YCR021C	YKL102C	P34249	101 aa		3.14	□□□□□ -1.91
HSP30	YCR021C	PRS4	P38063	326 aa	Predicted RBP	3.14	□□□□□ -1.91
HSP30	YCR021C	YBL071C	P38185	102 aa		3.14	□□□□□ -1.91
HSP30	YCR021C	DOG2	P38773	246 aa		3.14	□□□□□ -1.91
HSP30	YCR021C	DOG1	P38774	246 aa		3.14	□□□□□ -1.91
HSP30	YCR021C	UIP3	P39547	235 aa		3.14	□□□□□ -1.91
HSP30	YCR021C	NOP16	P40007	231 aa	Known RBP	3.14	□□□□□ -1.91
HSP30	YCR021C	RTS2	P40962	232 aa		3.14	□□□□□ -1.91
HSP30	YCR021C	LOC1	P43586	204 aa	Predicted RBP	3.14	□□□□□ -1.91
HSP30	YCR021C	GPI2	P46961	280 aa		3.14	□□□□□ -1.91
HSP30	YCR021C	HIT1	P46973	164 aa		3.14	□□□□□ -1.91
HSP30	YCR021C	LCB3	P47013	409 aa		3.14	□□□□□ -1.91
HSP30	YCR021C	MIC27	P50945	234 aa		3.14	□□□□□ -1.91
HSP30	YCR021C	CAX4	P53223	239 aa		3.14	□□□□□ -1.91
HSP30	YCR021C	RPL15B	P54780	204 aa	Predicted RBP	3.14	□□□□□ -1.91
HSP30	YCR021C	SAE3	P89114	91 aa		3.14	□□□□□ -1.91
HSP30	YCR021C	RKI1	Q12189	258 aa		3.14	□□□□□ -1.91
HSP30	YCR021C	AYT1	Q12226	474 aa		3.14	□□□□□ -1.91
HSP30	YCR021C	YCL001W-B	Q96VH2	84 aa		3.14	□□□□□ -1.91
HSP30	YCR021C	CYC3	P06182	269 aa		3.13	□□□□□ -1.91
HSP30	YCR021C	FEN2	P25621	512 aa	Known RBP	3.13	□□□□□ -1.91
HSP30	YCR021C	SUA7	P29055	345 aa	Predicted RBP	3.13	□□□□□ -1.91
HSP30	YCR021C	FPR2	P32472	135 aa		3.13	□□□□□ -1.91
HSP30	YCR021C	PHD1	P36093	366 aa		3.13	□□□□□ -1.91
HSP30	YCR021C	CSH1	P38287	376 aa		3.13	□□□□□ -1.91
HSP30	YCR021C	RPB11	P38902	120 aa		3.13	□□□□□ -1.91
HSP30	YCR021C	MST28	P39552	234 aa		3.13	□□□□□ -1.91
HSP30	YCR021C	GLC8	P41818	229 aa		3.13	□□□□□ -1.91
HSP30	YCR021C	RPA43	P46669	326 aa		3.13	□□□□□ -1.91
HSP30	YCR021C	BNA1	P47096	177 aa		3.13	□□□□□ -1.91
HSP30	YCR021C	YGR149W	P48236	432 aa		3.13	□□□□□ -1.91
HSP30	YCR021C	YDL186W	P48568	277 aa		3.13	□□□□□ -1.91
HSP30	YCR021C	MST27	P53176	234 aa		3.13	□□□□□ -1.91
HSP30	YCR021C	YGR219W	P53307	113 aa		3.13	□□□□□ -1.91
HSP30	YCR021C	TOM7	P53507	60 aa		3.13	□□□□□ -1.91
HSP30	YCR021C	SPG4	Q04438	115 aa		3.13	□□□□□ -1.91
HSP30	YCR021C	TVP18	Q04767	167 aa		3.13	□□□□□ -1.91
HSP30	YCR021C	HOR7	Q05827	59 aa		3.13	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 28.3 ms