RNA–Protein interactions for RNA: YBR135W

CKS1, Transcript of Cyclin-dependent protein kinase regulatory subunit and adaptor, yeastyeast

Gene CKS1, Length 453 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CKS1YBR135W RUB1Q03919 77 aa3.11□□□□□ -1.91
CKS1YBR135W PRP11Q07350 266 aaPredicted RBP3.11□□□□□ -1.91
CKS1YBR135W YHR214C-EQ8TGK0 99 aa3.11□□□□□ -1.91
CKS1YBR135W YOR032W-AQ8TGS1 66 aa3.11□□□□□ -1.91
CKS1YBR135W ADH3P07246 375 aaKnown RBP3.1□□□□□ -1.91
CKS1YBR135W UBI4P0CG63 381 aaKnown RBP3.1□□□□□ -1.91
CKS1YBR135W RPL2AP0CX45 254 aaKnown RBP3.1□□□□□ -1.91
CKS1YBR135W RPL2BP0CX46 254 aaKnown RBP3.1□□□□□ -1.91
CKS1YBR135W BUD23P25627 275 aaPredicted RBP3.1□□□□□ -1.91
CKS1YBR135W UGX2P32772 223 aa3.1□□□□□ -1.91
CKS1YBR135W YKL102CP34249 101 aa3.1□□□□□ -1.91
CKS1YBR135W PTC1P35182 281 aa3.1□□□□□ -1.91
CKS1YBR135W MRPL24P36525 258 aaPredicted RBP3.1□□□□□ -1.91
CKS1YBR135W CTR2P38865 189 aa3.1□□□□□ -1.91
CKS1YBR135W YEA4P40004 342 aa3.1□□□□□ -1.91
CKS1YBR135W HHT1P61830 136 aa3.1□□□□□ -1.91
CKS1YBR135W GPI17Q04080 534 aa3.1□□□□□ -1.91
CKS1YBR135W HRD1Q08109 551 aa3.1□□□□□ -1.91
CKS1YBR135W ATP14Q12349 124 aa3.1□□□□□ -1.91
CKS1YBR135W YIR021W-AQ3E739 70 aa3.1□□□□□ -1.91
CKS1YBR135W YKL068W-AQ3E826 78 aa3.1□□□□□ -1.91
CKS1YBR135W UTP20P35194 2493 aaKnown RBP3.09□□□□□ -1.91
CKS1YBR135W YHR032W-AP0C5N6 59 aa3.09□□□□□ -1.91
CKS1YBR135W RPS1BP23248 255 aaKnown RBP3.09□□□□□ -1.91
CKS1YBR135W VMA7P39111 118 aa3.09□□□□□ -1.91
CKS1YBR135W YAR068WP39564 161 aa3.09□□□□□ -1.91
CKS1YBR135W AIM2P39721 246 aa3.09□□□□□ -1.91
CKS1YBR135W PGD1P40356 397 aa3.09□□□□□ -1.91
CKS1YBR135W MNN5P46982 586 aa3.09□□□□□ -1.91
CKS1YBR135W PAC10P48363 199 aa3.09□□□□□ -1.91
CKS1YBR135W SOL1P50278 321 aa3.09□□□□□ -1.91
CKS1YBR135W YGR026WP53217 278 aa3.09□□□□□ -1.91
CKS1YBR135W FMN1Q03778 218 aa3.09□□□□□ -1.91
CKS1YBR135W DGA1Q08650 418 aa3.09□□□□□ -1.91
CKS1YBR135W FYV7Q12247 151 aa3.09□□□□□ -1.91
CKS1YBR135W YFR010W-AP0C5N0 62 aa3.08□□□□□ -1.92
CKS1YBR135W FCY21P40039 528 aa3.08□□□□□ -1.92
CKS1YBR135W RFC2P40348 353 aa3.08□□□□□ -1.92
CKS1YBR135W DSK2P48510 373 aa3.08□□□□□ -1.92
CKS1YBR135W CWC27Q02770 301 aa3.08□□□□□ -1.92
CKS1YBR135W COF1Q03048 143 aaKnown RBP3.08□□□□□ -1.92
CKS1YBR135W CGI121Q03705 181 aaKnown RBP3.08□□□□□ -1.92
CKS1YBR135W MPD1Q12404 318 aaKnown RBP3.08□□□□□ -1.92
CKS1YBR135W PSF1Q12488 208 aa3.08□□□□□ -1.92
CKS1YBR135W MBF1O14467 151 aaKnown RBP3.07□□□□□ -1.92
CKS1YBR135W STP22P25604 385 aa3.07□□□□□ -1.92
CKS1YBR135W YOR062CP36025 268 aa3.07□□□□□ -1.92
CKS1YBR135W PAN3P36102 679 aaPredicted RBP3.07□□□□□ -1.92
CKS1YBR135W MRPL17P36528 281 aa3.07□□□□□ -1.92
CKS1YBR135W YBR063CP38083 404 aa3.07□□□□□ -1.92
CKS1YBR135W RPS20P38701 121 aaKnown RBP3.07□□□□□ -1.92
CKS1YBR135W ERJ5P43613 295 aaPredicted RBP3.07□□□□□ -1.92
CKS1YBR135W ARO8P53090 500 aaKnown RBP3.07□□□□□ -1.92
CKS1YBR135W YGR050CP53231 118 aa3.07□□□□□ -1.92
CKS1YBR135W APS2Q00381 147 aa3.07□□□□□ -1.92
CKS1YBR135W MIX14Q04341 121 aa3.07□□□□□ -1.92
CKS1YBR135W ATG39Q06159 398 aa3.07□□□□□ -1.92
CKS1YBR135W CNL1Q06333 122 aa3.07□□□□□ -1.92
CKS1YBR135W CDC7P06243 507 aa3.06□□□□□ -1.92
CKS1YBR135W SPO13P23624 291 aa3.06□□□□□ -1.92
CKS1YBR135W CNB1P25296 175 aa3.06□□□□□ -1.92
CKS1YBR135W MRP49P32388 137 aa3.06□□□□□ -1.92
CKS1YBR135W AST2P39945 430 aaKnown RBP3.06□□□□□ -1.92
CKS1YBR135W PGA1P53896 198 aa3.06□□□□□ -1.92
CKS1YBR135W SAE3P89114 91 aa3.06□□□□□ -1.92
CKS1YBR135W YOR214CQ12282 236 aa3.06□□□□□ -1.92
CKS1YBR135W YHR214C-DP0CX93 97 aa3.05□□□□□ -1.92
CKS1YBR135W MAG1P22134 296 aaKnown RBP3.05□□□□□ -1.92
CKS1YBR135W SHE2P36068 246 aaKnown RBP RIP-Chip data3.05□□□□□ -1.92not detected
CKS1YBR135W IRC22P40006 225 aa3.05□□□□□ -1.92
CKS1YBR135W NCE101Q02820 53 aa3.05□□□□□ -1.92
CKS1YBR135W YMR253CQ04835 414 aa3.05□□□□□ -1.92
CKS1YBR135W YPR014CQ6B0W2 109 aa3.05□□□□□ -1.92
CKS1YBR135W TRA1P38811 3744 aa3.04□□□□□ -1.92
CKS1YBR135W FLO9P39712 1322 aa3.04□□□□□ -1.92
CKS1YBR135W DDI2P0CH63 225 aa3.04□□□□□ -1.92
CKS1YBR135W DDI3P0CH64 225 aa3.04□□□□□ -1.92
CKS1YBR135W CKS1P20486 150 aaKnown RBP3.04□□□□□ -1.92
CKS1YBR135W YCL042WP25572 119 aa3.04□□□□□ -1.92
CKS1YBR135W SKG1P36169 355 aa3.04□□□□□ -1.92
CKS1YBR135W NSG1P38837 291 aa3.04□□□□□ -1.92
CKS1YBR135W YPL073CP40323 161 aa3.04□□□□□ -1.92
CKS1YBR135W ARP3P47117 449 aaKnown RBP3.04□□□□□ -1.92
CKS1YBR135W ORM1P53224 222 aa3.04□□□□□ -1.92
CKS1YBR135W YGR039WP53225 103 aa3.04□□□□□ -1.92
CKS1YBR135W HHO1P53551 258 aa3.04□□□□□ -1.92
CKS1YBR135W YDR366CP87287 132 aa3.04□□□□□ -1.92
CKS1YBR135W THI74Q04083 370 aa3.04□□□□□ -1.92
CKS1YBR135W YOL131WQ08270 108 aa3.04□□□□□ -1.92
CKS1YBR135W TSC3Q3E790 80 aa3.04□□□□□ -1.92
CKS1YBR135W YKL018C-AQ3E7A7 99 aa3.04□□□□□ -1.92
CKS1YBR135W TDA8Q6B2U8 126 aa3.04□□□□□ -1.92
CKS1YBR135W YCL001W-BQ96VH2 84 aa3.04□□□□□ -1.92
CKS1YBR135W RPL9AP05738 191 aaKnown RBP3.03□□□□□ -1.92
CKS1YBR135W YPR170W-BP0C5R9 85 aa3.03□□□□□ -1.92
CKS1YBR135W RPL30P14120 105 aaKnown RBP3.03□□□□□ -1.92
CKS1YBR135W PHO85P17157 305 aa3.03□□□□□ -1.92
CKS1YBR135W PET9P18239 318 aaKnown RBP3.03□□□□□ -1.92
CKS1YBR135W HSP150P32478 413 aa3.03□□□□□ -1.92
CKS1YBR135W LHP1P33399 275 aaKnown RBP3.03□□□□□ -1.92
Retrieved 100 of 5,963 RNA–protein pairs in 56.1 ms