RNA–Protein interactions for RNA: YAR042W

SWH1, Transcript of Protein similar to mammalian oxysterol-binding protein, yeast

Gene SWH1, Length 3,567 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SWH1	YAR042W	THI72	Q08579	599 aa		3.19	□□□□□ -1.9
SWH1	YAR042W	FYV4	P38783	130 aa	Predicted RBP	3.18	□□□□□ -1.9
SWH1	YAR042W	VPS71	Q03433	280 aa		3.18	□□□□□ -1.9
SWH1	YAR042W	YMR254C	Q04838	102 aa		3.18	□□□□□ -1.9
SWH1	YAR042W	SCW10	Q04951	389 aa		3.18	□□□□□ -1.9
SWH1	YAR042W	NCE102	Q12207	173 aa	RIP-Chip data	3.18	□□□□□ -1.9	not detected
SWH1	YAR042W	PRM5	P40476	318 aa		3.18	□□□□□ -1.9
SWH1	YAR042W	ATG4	P53867	494 aa		3.18	□□□□□ -1.9
SWH1	YAR042W	YHP1	Q04116	353 aa		3.18	□□□□□ -1.9
SWH1	YAR042W	YDR391C	Q04170	232 aa		3.18	□□□□□ -1.9
SWH1	YAR042W	IRC25	Q07951	179 aa		3.18	□□□□□ -1.9
SWH1	YAR042W	TIR1	P10863	254 aa		3.18	□□□□□ -1.9
SWH1	YAR042W	IMP1	P28627	190 aa		3.18	□□□□□ -1.9
SWH1	YAR042W	DOG2	P38773	246 aa		3.18	□□□□□ -1.9
SWH1	YAR042W	YHR138C	P38841	114 aa	Predicted RBP	3.18	□□□□□ -1.9
SWH1	YAR042W	YIL102C-A	Q2V2P5	75 aa		3.18	□□□□□ -1.9
SWH1	YAR042W	YOR032W-A	Q8TGS1	66 aa		3.18	□□□□□ -1.9
SWH1	YAR042W	ACC1	Q00955	2233 aa	Known RBP	3.18	□□□□□ -1.9
SWH1	YAR042W	YFL068W	P0CX99	160 aa		3.17	□□□□□ -1.9
SWH1	YAR042W	YLL066W-A	P0CY00	160 aa		3.17	□□□□□ -1.9
SWH1	YAR042W	YLL067W-A	P0CY01	160 aa		3.17	□□□□□ -1.9
SWH1	YAR042W	INO4	P13902	151 aa		3.17	□□□□□ -1.9
SWH1	YAR042W	DAL82	P21705	255 aa		3.17	□□□□□ -1.9
SWH1	YAR042W	SOR1	P35497	357 aa	Known RBP	3.17	□□□□□ -1.9
SWH1	YAR042W	TRS23	Q03784	219 aa		3.17	□□□□□ -1.9
SWH1	YAR042W	API2	Q04413	109 aa		3.17	□□□□□ -1.9
SWH1	YAR042W	SOR2	Q07786	357 aa		3.17	□□□□□ -1.9
SWH1	YAR042W	YDR215C	Q12240	137 aa		3.17	□□□□□ -1.9
SWH1	YAR042W	MPD1	Q12404	318 aa	Known RBP	3.17	□□□□□ -1.9
SWH1	YAR042W	SEC16	P48415	2195 aa	Known RBP	3.17	□□□□□ -1.9
SWH1	YAR042W	YOR304C-A	O14468	76 aa		3.17	□□□□□ -1.9
SWH1	YAR042W	RPL7A	P05737	244 aa	Known RBP	3.17	□□□□□ -1.9
SWH1	YAR042W	BET5	Q03630	159 aa		3.17	□□□□□ -1.9
SWH1	YAR042W	HSP12	P22943	109 aa	Known RBP	3.17	□□□□□ -1.9
SWH1	YAR042W	YKL069W	P36088	180 aa		3.17	□□□□□ -1.9
SWH1	YAR042W	TOM7	P53507	60 aa		3.17	□□□□□ -1.9
SWH1	YAR042W	RAV2	Q03956	351 aa		3.17	□□□□□ -1.9
SWH1	YAR042W	YPR098C	Q06089	161 aa		3.17	□□□□□ -1.9
SWH1	YAR042W	RPL12A	P0CX53	165 aa	Known RBP	3.16	□□□□□ -1.9
SWH1	YAR042W	RPL12B	P0CX54	165 aa		3.16	□□□□□ -1.9
SWH1	YAR042W	CDC26	P14724	124 aa		3.16	□□□□□ -1.9
SWH1	YAR042W	PRY1	P47032	299 aa		3.16	□□□□□ -1.9
SWH1	YAR042W	BRP1	P53194	125 aa		3.16	□□□□□ -1.9
SWH1	YAR042W	YOR376W	Q08900	122 aa		3.16	□□□□□ -1.9
SWH1	YAR042W	FZF1	P32805	299 aa		3.16	□□□□□ -1.9
SWH1	YAR042W	REC104	P33323	182 aa		3.16	□□□□□ -1.9
SWH1	YAR042W	SFT2	P38166	215 aa		3.16	□□□□□ -1.9
SWH1	YAR042W	YHR173C	P38864	112 aa		3.16	□□□□□ -1.9
SWH1	YAR042W	YAR068W	P39564	161 aa		3.16	□□□□□ -1.9
SWH1	YAR042W	YFL054C	P43549	646 aa		3.16	□□□□□ -1.9
SWH1	YAR042W	UBC13	P52490	153 aa		3.16	□□□□□ -1.9
SWH1	YAR042W	ELC1	Q03071	99 aa		3.16	□□□□□ -1.9
SWH1	YAR042W	GTO3	Q04806	366 aa		3.16	□□□□□ -1.9
SWH1	YAR042W	YCR075W-A	Q3E830	75 aa		3.16	□□□□□ -1.9
SWH1	YAR042W	ISD11	Q6Q560	94 aa		3.16	□□□□□ -1.9
SWH1	YAR042W	YIL012W	P40551	113 aa		3.16	□□□□□ -1.9
SWH1	YAR042W	REE1	P40893	198 aa		3.16	□□□□□ -1.9
SWH1	YAR042W	YJR096W	P47137	282 aa		3.16	□□□□□ -1.9
SWH1	YAR042W	TIM18	Q08749	192 aa		3.16	□□□□□ -1.9
SWH1	YAR042W	HTL1	Q9URQ5	78 aa		3.16	□□□□□ -1.9
SWH1	YAR042W	ROX3	P25046	220 aa		3.15	□□□□□ -1.9
SWH1	YAR042W	YIL029C	P40538	142 aa		3.15	□□□□□ -1.9
SWH1	YAR042W	YFR045W	P43617	309 aa		3.15	□□□□□ -1.9
SWH1	YAR042W	HSK3	P69852	69 aa		3.15	□□□□□ -1.9
SWH1	YAR042W	RAF1	Q06891	181 aa		3.15	□□□□□ -1.9
SWH1	YAR042W	AYT1	Q12226	474 aa		3.15	□□□□□ -1.9
SWH1	YAR042W	YPT10	P38146	199 aa		3.15	□□□□□ -1.91
SWH1	YAR042W	ATX1	P38636	73 aa		3.15	□□□□□ -1.91
SWH1	YAR042W	ECM14	P38836	430 aa		3.15	□□□□□ -1.91
SWH1	YAR042W	YNL092W	P53934	400 aa		3.15	□□□□□ -1.91
SWH1	YAR042W	ATP19	P81451	68 aa		3.15	□□□□□ -1.91
SWH1	YAR042W	YPS3	Q12303	508 aa		3.15	□□□□□ -1.91
SWH1	YAR042W	BOL1	Q3E793	110 aa		3.15	□□□□□ -1.91
SWH1	YAR042W	IRA2	P19158	3079 aa		3.15	□□□□□ -1.91
SWH1	YAR042W	YGP1	P38616	354 aa	Known RBP	3.15	□□□□□ -1.91
SWH1	YAR042W	OST1	P41543	476 aa	Known RBP	3.15	□□□□□ -1.91
SWH1	YAR042W	EOS1	P53938	366 aa		3.15	□□□□□ -1.91
SWH1	YAR042W	PIN2	Q12057	282 aa		3.15	□□□□□ -1.91
SWH1	YAR042W	WSC3	Q12215	556 aa		3.15	□□□□□ -1.91
SWH1	YAR042W	YHR214C-D	P0CX93	97 aa		3.14	□□□□□ -1.91
SWH1	YAR042W	APS1	P35181	156 aa		3.14	□□□□□ -1.91
SWH1	YAR042W	PRS4	P38063	326 aa	Predicted RBP	3.14	□□□□□ -1.91
SWH1	YAR042W	MRPL19	P53875	158 aa		3.14	□□□□□ -1.91
SWH1	YAR042W	SDC1	Q03323	175 aa		3.14	□□□□□ -1.91
SWH1	YAR042W	YGL258W-A	Q3E740	77 aa		3.14	□□□□□ -1.91
SWH1	YAR042W	MRPL31	P14063	131 aa	Predicted RBP	3.14	□□□□□ -1.91
SWH1	YAR042W	MDM10	P18409	493 aa		3.14	□□□□□ -1.91
SWH1	YAR042W	TOM40	P23644	387 aa	Known RBP	3.14	□□□□□ -1.91
SWH1	YAR042W	SPC29	P33419	253 aa		3.14	□□□□□ -1.91
SWH1	YAR042W	MTC6	P38849	526 aa		3.14	□□□□□ -1.91
SWH1	YAR042W	YPI1	P43587	155 aa		3.14	□□□□□ -1.91
SWH1	YAR042W	UPS1	Q05776	175 aa		3.14	□□□□□ -1.91
SWH1	YAR042W	FIT2	Q08906	153 aa		3.14	□□□□□ -1.91
SWH1	YAR042W	PRM3	Q08931	133 aa		3.14	□□□□□ -1.91
SWH1	YAR042W	HFA1	P32874	2273 aa		3.14	□□□□□ -1.91
SWH1	YAR042W	YPR117W	Q06116	2489 aa		3.14	□□□□□ -1.91
SWH1	YAR042W	VPS63	O13549	108 aa		3.13	□□□□□ -1.91
SWH1	YAR042W	ERG8	P24521	451 aa		3.13	□□□□□ -1.91
SWH1	YAR042W	YGL015C	P33199	130 aa		3.13	□□□□□ -1.91
SWH1	YAR042W	PAU7	P39545	55 aa		3.13	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 110.6 ms