RNA–Protein interactions for RNA: YAL013W

DEP1, Transcript of Component of the Rpd3L histone deacetylase complex, yeastyeast

Gene DEP1, Length 1,218 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DEP1YAL013W POR2P40478 281 aa11.08□□□□□ -0.64
DEP1YAL013W MOG1P47123 218 aa11.08□□□□□ -0.64
DEP1YAL013W CAB4P53332 305 aa11.08□□□□□ -0.64
DEP1YAL013W DAD3P69850 94 aa11.08□□□□□ -0.64
DEP1YAL013W FMP49A0A023PZB3 126 aa11.07□□□□□ -0.64
DEP1YAL013W MRS1P07266 363 aa11.07□□□□□ -0.64
DEP1YAL013W NHP6AP11632 93 aaKnown RBP11.07□□□□□ -0.64
DEP1YAL013W POF1P25576 258 aa11.07□□□□□ -0.64
DEP1YAL013W PHD1P36093 366 aa11.07□□□□□ -0.64
DEP1YAL013W SNU13P39990 126 aaKnown RBP11.07□□□□□ -0.64
DEP1YAL013W AIM24P47127 394 aa11.07□□□□□ -0.64
DEP1YAL013W RAV2Q03956 351 aa11.07□□□□□ -0.64
DEP1YAL013W COX2P00410 251 aa11.06□□□□□ -0.64
DEP1YAL013W ERS1P17261 260 aa11.06□□□□□ -0.64
DEP1YAL013W SRP14P38985 146 aa11.06□□□□□ -0.64
DEP1YAL013W SNU23Q12368 194 aaPredicted RBP11.06□□□□□ -0.64
DEP1YAL013W TIR2P33890 251 aa11.05□□□□□ -0.64
DEP1YAL013W YBR013CP38215 129 aa11.05□□□□□ -0.64
DEP1YAL013W HAM1P47119 197 aaKnown RBP11.05□□□□□ -0.64
DEP1YAL013W TOS8P53147 276 aa11.04□□□□□ -0.64
DEP1YAL013W TOM7P53507 60 aa11.04□□□□□ -0.64
DEP1YAL013W FIP1P45976 327 aa11.03□□□□□ -0.64
DEP1YAL013W YGR026WP53217 278 aa11.03□□□□□ -0.64
DEP1YAL013W NCE103P53615 221 aa11.03□□□□□ -0.64
DEP1YAL013W ATP19P81451 68 aa11.03□□□□□ -0.64
DEP1YAL013W YMR181CQ03231 154 aa11.03□□□□□ -0.64
DEP1YAL013W NAT3Q06504 195 aa11.03□□□□□ -0.64
DEP1YAL013W ATP16Q12165 160 aa11.03□□□□□ -0.64
DEP1YAL013W YIL077CP40508 320 aa11.02□□□□□ -0.65
DEP1YAL013W DCN1Q12395 269 aa11.02□□□□□ -0.65
DEP1YAL013W MRPL23Q12487 163 aaPredicted RBP11.02□□□□□ -0.65
DEP1YAL013W YBR090CP38253 122 aa11.01□□□□□ -0.65
DEP1YAL013W HUA1P40325 198 aa11.01□□□□□ -0.65
DEP1YAL013W PAU5P43575 122 aa11.01□□□□□ -0.65
DEP1YAL013W LAS17Q12446 633 aa11.01□□□□□ -0.65
DEP1YAL013W TIR1P10863 254 aa11□□□□□ -0.65
DEP1YAL013W YNK1P36010 153 aaKnown RBP11□□□□□ -0.65
DEP1YAL013W DUG3P53871 357 aa11□□□□□ -0.65
DEP1YAL013W FYV6P53913 173 aa11□□□□□ -0.65
DEP1YAL013W APS2Q00381 147 aa11□□□□□ -0.65
DEP1YAL013W SMT3Q12306 101 aaKnown RBP11□□□□□ -0.65
DEP1YAL013W YLR302CO13544 120 aa10.99□□□□□ -0.65
DEP1YAL013W MBB1P39534 108 aa10.99□□□□□ -0.65
DEP1YAL013W YPI1P43587 155 aa10.99□□□□□ -0.65
DEP1YAL013W UBC7Q02159 165 aa10.99□□□□□ -0.65
DEP1YAL013W YPR013CQ12145 317 aa10.99□□□□□ -0.65
DEP1YAL013W MRPL33P20084 86 aa10.98□□□□□ -0.65
DEP1YAL013W QRI5P32344 111 aa10.98□□□□□ -0.65
DEP1YAL013W SNF11P38956 169 aa10.98□□□□□ -0.65
DEP1YAL013W YOL160WQ08321 113 aa10.98□□□□□ -0.65
DEP1YAL013W MSA1Q08471 629 aa10.98□□□□□ -0.65
DEP1YAL013W PAU19P0CE85 124 aa10.97□□□□□ -0.65
DEP1YAL013W PAU21P0CE86 164 aa10.97□□□□□ -0.65
DEP1YAL013W PAU22P0CE87 164 aa10.97□□□□□ -0.65
DEP1YAL013W PAU3P25610 124 aa10.97□□□□□ -0.65
DEP1YAL013W YPT10P38146 199 aa10.97□□□□□ -0.65
DEP1YAL013W IZH1Q03419 316 aa10.97□□□□□ -0.65
DEP1YAL013W ATG39Q06159 398 aa10.97□□□□□ -0.65
DEP1YAL013W HTB2P02294 131 aa10.96□□□□□ -0.65
DEP1YAL013W MRPL20P22354 195 aaPredicted RBP10.96□□□□□ -0.65
DEP1YAL013W PRY2P36110 329 aa10.96□□□□□ -0.65
DEP1YAL013W AME1P38313 324 aa10.96□□□□□ -0.65
DEP1YAL013W LCB3P47013 409 aa10.96□□□□□ -0.65
DEP1YAL013W YGL185CP53100 379 aa10.96□□□□□ -0.65
DEP1YAL013W PRM3Q08931 133 aa10.96□□□□□ -0.65
DEP1YAL013W YGL010WP25338 174 aa10.95□□□□□ -0.66
DEP1YAL013W GET2P40056 285 aa10.95□□□□□ -0.66
DEP1YAL013W PRE9P23638 258 aaKnown RBP10.94□□□□□ -0.66
DEP1YAL013W FZF1P32805 299 aa10.93□□□□□ -0.66
DEP1YAL013W YOR105WQ08504 108 aa10.93□□□□□ -0.66
DEP1YAL013W YCL001W-BQ96VH2 84 aa10.93□□□□□ -0.66
DEP1YAL013W CMC1P36064 111 aa10.92□□□□□ -0.66
DEP1YAL013W SUR2P38992 349 aa10.92□□□□□ -0.66
DEP1YAL013W YMR141CP40211 102 aa10.92□□□□□ -0.66
DEP1YAL013W YDL183CP48569 320 aa10.92□□□□□ -0.66
DEP1YAL013W RPL31BP0C2H9 113 aaKnown RBP10.91□□□□□ -0.66
DEP1YAL013W YER190C-BP0CX94 160 aa10.91□□□□□ -0.66
DEP1YAL013W YEL077W-AP0CX95 160 aa10.91□□□□□ -0.66
DEP1YAL013W YGR296C-BP0CX96 160 aa10.91□□□□□ -0.66
DEP1YAL013W YPL283W-BP0CX97 160 aa10.91□□□□□ -0.66
DEP1YAL013W YPR204C-AP0CX98 160 aa10.91□□□□□ -0.66
DEP1YAL013W YFL068WP0CX99 160 aa10.91□□□□□ -0.66
DEP1YAL013W YLL066W-AP0CY00 160 aa10.91□□□□□ -0.66
DEP1YAL013W YLL067W-AP0CY01 160 aa10.91□□□□□ -0.66
DEP1YAL013W HMRA1P0CY11 126 aa10.91□□□□□ -0.66
DEP1YAL013W MIX23P38162 196 aa10.91□□□□□ -0.66
DEP1YAL013W RPA43P46669 326 aa10.91□□□□□ -0.66
DEP1YAL013W YGR025WP53216 100 aa10.91□□□□□ -0.66
DEP1YAL013W SPI1P40092 148 aa10.9□□□□□ -0.66
DEP1YAL013W CAX4P53223 239 aa10.9□□□□□ -0.66
DEP1YAL013W COX18P53239 316 aa10.9□□□□□ -0.66
DEP1YAL013W YNR034W-AQ3E841 98 aa10.9□□□□□ -0.66
DEP1YAL013W DAD4P69851 72 aa10.89□□□□□ -0.67
DEP1YAL013W GIM5Q04493 163 aa10.89□□□□□ -0.67
DEP1YAL013W DYN1P36022 4092 aa10.89□□□□□ -0.67
DEP1YAL013W YFR045WP43617 309 aa10.88□□□□□ -0.67
DEP1YAL013W TRI1Q05024 226 aa10.88□□□□□ -0.67
DEP1YAL013W IZH3Q07959 543 aa10.88□□□□□ -0.67
DEP1YAL013W GEP3Q08622 556 aa10.88□□□□□ -0.67
DEP1YAL013W UTP20P35194 2493 aaKnown RBP10.87□□□□□ -0.67
Retrieved 100 of 5,963 RNA–protein pairs in 28.9 ms