RNA–Protein interactions for RNA: ENST00000642088.1

CASC19-278, Transcript of cancer susceptibility 19, humanhuman

Gene CASC19, Length 2,091 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-278ENST00000642088 CCDC194A0A1B0GVG4 234 aa4.82□□□□□ -1.64
CASC19-278ENST00000642088 LAD1O00515 517 aa4.82□□□□□ -1.64
CASC19-278ENST00000642088 PEX10O60683 326 aa4.82□□□□□ -1.64
CASC19-278ENST00000642088 LPLP06858 475 aa4.82□□□□□ -1.64
CASC19-278ENST00000642088 PARP1P09874 1014 aaKnown RBP4.82□□□□□ -1.64
CASC19-278ENST00000642088 COL6A1P12109 1028 aa4.82□□□□□ -1.64
CASC19-278ENST00000642088 VEGFAP15692 232 aaPredicted RBP4.82□□□□□ -1.64
CASC19-278ENST00000642088 GNA11P29992 359 aa4.82□□□□□ -1.64
CASC19-278ENST00000642088 STX17P56962 302 aa4.82□□□□□ -1.64
CASC19-278ENST00000642088 UBASH3AP57075 661 aa4.82□□□□□ -1.64
CASC19-278ENST00000642088 GSDMDP57764 484 aa4.82□□□□□ -1.64
CASC19-278ENST00000642088 RHBDL3P58872 404 aa4.82□□□□□ -1.64
CASC19-278ENST00000642088 NKX3-2P78367 333 aa4.82□□□□□ -1.64
CASC19-278ENST00000642088 VMACQ2NL98 169 aa4.82□□□□□ -1.64
CASC19-278ENST00000642088 ASPRV1Q53RT3 343 aa4.82□□□□□ -1.64
CASC19-278ENST00000642088 TTC38Q5R3I4 469 aa4.82□□□□□ -1.64
CASC19-278ENST00000642088 SYDE2Q5VT97 1194 aa4.82□□□□□ -1.64
CASC19-278ENST00000642088 ARL6IP4Q66PJ3 421 aaKnown RBP4.82□□□□□ -1.64
CASC19-278ENST00000642088 KLHL10Q6JEL2 608 aa4.82□□□□□ -1.64
CASC19-278ENST00000642088 OGFOD2Q6N063 350 aa4.82□□□□□ -1.64
CASC19-278ENST00000642088 NECAB2Q7Z6G3 386 aa4.82□□□□□ -1.64
CASC19-278ENST00000642088 C11orf74Q86VG3 221 aa4.82□□□□□ -1.64
CASC19-278ENST00000642088 C2CD5Q86YS7 1000 aa4.82□□□□□ -1.64
CASC19-278ENST00000642088 BLIDQ8IZY5 108 aa4.82□□□□□ -1.64
CASC19-278ENST00000642088 SRBD1Q8N5C6 995 aaKnown RBP4.82□□□□□ -1.64
CASC19-278ENST00000642088 ZNF610Q8N9Z0 462 aa4.82□□□□□ -1.64
CASC19-278ENST00000642088 KCNN1Q92952 543 aa4.82□□□□□ -1.64
CASC19-278ENST00000642088 ZBTB8AQ96BR9 441 aa4.82□□□□□ -1.64
CASC19-278ENST00000642088 ZBTB9Q96C00 473 aa4.82□□□□□ -1.64
CASC19-278ENST00000642088 DHX58Q96C10 678 aa4.82□□□□□ -1.64
CASC19-278ENST00000642088 EPSTI1Q96J88 318 aa4.82□□□□□ -1.64
CASC19-278ENST00000642088 CCDC17Q96LX7 622 aa4.82□□□□□ -1.64
CASC19-278ENST00000642088 C11orf84Q9BUA3 381 aaPredicted RBP4.82□□□□□ -1.64
CASC19-278ENST00000642088 CCDC94Q9BW85 323 aaPredicted RBP4.82□□□□□ -1.64
CASC19-278ENST00000642088 DHX36Q9H2U1 1008 aaKnown RBP4.82□□□□□ -1.64
CASC19-278ENST00000642088 ACSS2Q9NR19 701 aa4.82□□□□□ -1.64
CASC19-278ENST00000642088 SEC63Q9UGP8 760 aaKnown RBP4.82□□□□□ -1.64
CASC19-278ENST00000642088 FBXO2Q9UK22 296 aaPredicted RBP4.82□□□□□ -1.64
CASC19-278ENST00000642088 ZNF215Q9UL58 517 aaPredicted RBP4.82□□□□□ -1.64
CASC19-278ENST00000642088 RBBP6Q7Z6E9 1792 aaKnown RBP4.82□□□□□ -1.64
CASC19-278ENST00000642088 PRSS38A1L453 326 aa4.81□□□□□ -1.64
CASC19-278ENST00000642088 ABLIM1O14639 778 aa4.81□□□□□ -1.64
CASC19-278ENST00000642088 PARNO95453 639 aaKnown RBP4.81□□□□□ -1.64
CASC19-278ENST00000642088 C1QTNF9P0C862 333 aa4.81□□□□□ -1.64
CASC19-278ENST00000642088 CYP2C8P10632 490 aa4.81□□□□□ -1.64
CASC19-278ENST00000642088 PI3P19957 117 aa4.81□□□□□ -1.64
CASC19-278ENST00000642088 SFPQP23246 707 aaKnown RBP eCLIP4.81□□□□□ -1.64
CASC19-278ENST00000642088 ADCY8P40145 1251 aa4.81□□□□□ -1.64
CASC19-278ENST00000642088 TXKP42681 527 aa4.81□□□□□ -1.64
CASC19-278ENST00000642088 NOVP48745 357 aa4.81□□□□□ -1.64
CASC19-278ENST00000642088 HERVK_113P62684 666 aa4.81□□□□□ -1.64
CASC19-278ENST00000642088 ATP2C1P98194 919 aaPredicted RBP4.81□□□□□ -1.64
CASC19-278ENST00000642088 MCL1Q07820 350 aa4.81□□□□□ -1.64
CASC19-278ENST00000642088 LRRC32Q14392 662 aa4.81□□□□□ -1.64
CASC19-278ENST00000642088 PITRM1Q5JRX3 1037 aa4.81□□□□□ -1.64
CASC19-278ENST00000642088 ODR4Q5SWX8 454 aa4.81□□□□□ -1.64
CASC19-278ENST00000642088 STRIP1Q5VSL9 837 aa4.81□□□□□ -1.64
CASC19-278ENST00000642088 SYT10Q6XYQ8 523 aa4.81□□□□□ -1.64
CASC19-278ENST00000642088 SYDE1Q6ZW31 735 aaPredicted RBP4.81□□□□□ -1.64
CASC19-278ENST00000642088 RASSF3Q86WH2 238 aa4.81□□□□□ -1.64
CASC19-278ENST00000642088 CXorf67Q86X51 503 aaPredicted RBP4.81□□□□□ -1.64
CASC19-278ENST00000642088 FAM129CQ86XR2 697 aa4.81□□□□□ -1.64
CASC19-278ENST00000642088 CREBRFQ8IUR6 639 aa4.81□□□□□ -1.64
CASC19-278ENST00000642088 BCL6BQ8N143 479 aaPredicted RBP4.81□□□□□ -1.64
CASC19-278ENST00000642088 MLKLQ8NB16 471 aa4.81□□□□□ -1.64
CASC19-278ENST00000642088 SMARCE1Q969G3 411 aa4.81□□□□□ -1.64
CASC19-278ENST00000642088 ZNF622Q969S3 477 aaKnown RBP eCLIP4.81□□□□□ -1.64
CASC19-278ENST00000642088 RRP36Q96EU6 259 aaKnown RBP4.81□□□□□ -1.64
CASC19-278ENST00000642088 DYNLL2Q96FJ2 89 aa4.81□□□□□ -1.64
CASC19-278ENST00000642088 PPP1R13BQ96KQ4 1090 aa4.81□□□□□ -1.64
CASC19-278ENST00000642088 MAP7D2Q96T17 732 aa4.81□□□□□ -1.64
CASC19-278ENST00000642088 TMEM47Q9BQJ4 181 aa4.81□□□□□ -1.64
CASC19-278ENST00000642088 GTPBP4Q9BZE4 634 aaKnown RBP4.81□□□□□ -1.64
CASC19-278ENST00000642088 CSRNP2Q9H175 543 aa4.81□□□□□ -1.64
CASC19-278ENST00000642088 GLT8D2Q9H1C3 349 aa4.81□□□□□ -1.64
CASC19-278ENST00000642088 C6orf50Q9HD87 102 aa4.81□□□□□ -1.64
CASC19-278ENST00000642088 IL17RBQ9NRM6 502 aa4.81□□□□□ -1.64
CASC19-278ENST00000642088 SPATA6Q9NWH7 488 aaPredicted RBP4.81□□□□□ -1.64
CASC19-278ENST00000642088 HSPBP1Q9NZL4 362 aa4.81□□□□□ -1.64
CASC19-278ENST00000642088 ARHGAP28Q9P2N2 729 aa4.81□□□□□ -1.64
CASC19-278ENST00000642088 SAP30BPQ9UHR5 308 aaKnown RBP4.81□□□□□ -1.64
CASC19-278ENST00000642088 MAN1B1Q9UKM7 699 aa4.81□□□□□ -1.64
CASC19-278ENST00000642088 STX8Q9UNK0 236 aa4.81□□□□□ -1.64
CASC19-278ENST00000642088 FER1L6Q2WGJ9 1857 aa4.81□□□□□ -1.64
CASC19-278ENST00000642088 ESYT2A0FGR8 921 aa4.81□□□□□ -1.64
CASC19-278ENST00000642088 CTIFO43310 598 aaKnown RBP4.81□□□□□ -1.64
CASC19-278ENST00000642088 CDC25AP30304 524 aa4.81□□□□□ -1.64
CASC19-278ENST00000642088 HOXA7P31268 230 aaPredicted RBP4.81□□□□□ -1.64
CASC19-278ENST00000642088 LONP1P36776 959 aaKnown RBP4.81□□□□□ -1.64
CASC19-278ENST00000642088 PLCD1P51178 756 aa4.81□□□□□ -1.64
CASC19-278ENST00000642088 MANFP55145 182 aaKnown RBP4.81□□□□□ -1.64
CASC19-278ENST00000642088 ADKP55263 362 aaKnown RBP4.81□□□□□ -1.64
CASC19-278ENST00000642088 HTRA3P83110 453 aa4.81□□□□□ -1.64
CASC19-278ENST00000642088 MYL5Q02045 173 aa4.81□□□□□ -1.64
CASC19-278ENST00000642088 POSTNQ15063 836 aa4.81□□□□□ -1.64
CASC19-278ENST00000642088 ELF2Q15723 593 aa4.81□□□□□ -1.64
CASC19-278ENST00000642088 ZNF124Q15973 351 aa4.81□□□□□ -1.64
CASC19-278ENST00000642088 NT5DC1Q5TFE4 455 aa4.81□□□□□ -1.64
CASC19-278ENST00000642088 PRAMEF9Q5VWM5 478 aa4.81□□□□□ -1.64
CASC19-278ENST00000642088 KANK2Q63ZY3 851 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms