RNA–Protein interactions for RNA: ENST00000641587.1

PHGDH-222, Transcript of phosphoglycerate dehydrogenase, human

Gene PHGDH, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PHGDH-222	ENST00000641587	TIGD1	Q96MW7	591 aa		10.83	□□□□□ -0.68
PHGDH-222	ENST00000641587	SEPT5	Q99719	369 aa	Predicted RBP	10.83	□□□□□ -0.68
PHGDH-222	ENST00000641587	IL21	Q9HBE4	155 aa		10.83	□□□□□ -0.68
PHGDH-222	ENST00000641587	STK17A	Q9UEE5	414 aa		10.83	□□□□□ -0.68
PHGDH-222	ENST00000641587	UBQLN1	Q9UMX0	589 aa	Known RBP	10.83	□□□□□ -0.68
PHGDH-222	ENST00000641587	DENND4C	Q5VZ89	1909 aa		10.83	□□□□□ -0.68
PHGDH-222	ENST00000641587	CACNA1G	O43497	2377 aa		10.82	□□□□□ -0.68
PHGDH-222	ENST00000641587	TM4SF5	O14894	197 aa		10.82	□□□□□ -0.68
PHGDH-222	ENST00000641587	FAM189A1	O60320	539 aa		10.82	□□□□□ -0.68
PHGDH-222	ENST00000641587	RPP40	O75818	363 aa	Known RBP	10.82	□□□□□ -0.68
PHGDH-222	ENST00000641587	EPN2	O95208	641 aa		10.82	□□□□□ -0.68
PHGDH-222	ENST00000641587	CLTA	P09496	248 aa		10.82	□□□□□ -0.68
PHGDH-222	ENST00000641587	PLS3	P13797	630 aa		10.82	□□□□□ -0.68
PHGDH-222	ENST00000641587	GUCY2C	P25092	1073 aa		10.82	□□□□□ -0.68
PHGDH-222	ENST00000641587	NMT1	P30419	496 aa	Known RBP	10.82	□□□□□ -0.68
PHGDH-222	ENST00000641587	PPP2R3A	Q06190	1150 aa		10.82	□□□□□ -0.68
PHGDH-222	ENST00000641587	MCM6	Q14566	821 aa		10.82	□□□□□ -0.68
PHGDH-222	ENST00000641587	E2F4	Q16254	413 aa		10.82	□□□□□ -0.68
PHGDH-222	ENST00000641587	MGAT5B	Q3V5L5	792 aa		10.82	□□□□□ -0.68
PHGDH-222	ENST00000641587	SLC39A12	Q504Y0	691 aa		10.82	□□□□□ -0.68
PHGDH-222	ENST00000641587	HYI	Q5T013	277 aa		10.82	□□□□□ -0.68
PHGDH-222	ENST00000641587	FSTL4	Q6MZW2	842 aa		10.82	□□□□□ -0.68
PHGDH-222	ENST00000641587	C1orf228	Q6PIY5	440 aa		10.82	□□□□□ -0.68
PHGDH-222	ENST00000641587	ZPBP2	Q6X784	338 aa		10.82	□□□□□ -0.68
PHGDH-222	ENST00000641587	GRAMD1C	Q8IYS0	662 aa		10.82	□□□□□ -0.68
PHGDH-222	ENST00000641587	GIPC2	Q8TF65	315 aa		10.82	□□□□□ -0.68
PHGDH-222	ENST00000641587	GAB3	Q8WWW8	586 aa		10.82	□□□□□ -0.68
PHGDH-222	ENST00000641587	LARP4B	Q92615	738 aa	Known RBP	10.82	□□□□□ -0.68
PHGDH-222	ENST00000641587	RAD54L	Q92698	747 aa		10.82	□□□□□ -0.68
PHGDH-222	ENST00000641587	FAM212A	Q96EL1	285 aa		10.82	□□□□□ -0.68
PHGDH-222	ENST00000641587	BICD1	Q96G01	975 aa		10.82	□□□□□ -0.68
PHGDH-222	ENST00000641587	SENP8	Q96LD8	212 aa		10.82	□□□□□ -0.68
PHGDH-222	ENST00000641587	HHIP	Q96QV1	700 aa		10.82	□□□□□ -0.68
PHGDH-222	ENST00000641587	NTPCR	Q9BSD7	190 aa	Known RBP	10.82	□□□□□ -0.68
PHGDH-222	ENST00000641587	SLC46A2	Q9BY10	475 aa		10.82	□□□□□ -0.68
PHGDH-222	ENST00000641587	CUEDC2	Q9H467	287 aa		10.82	□□□□□ -0.68
PHGDH-222	ENST00000641587	TASP1	Q9H6P5	420 aa		10.82	□□□□□ -0.68
PHGDH-222	ENST00000641587	C17orf75	Q9HAS0	396 aa		10.82	□□□□□ -0.68
PHGDH-222	ENST00000641587	MAGEF1	Q9HAY2	307 aa		10.82	□□□□□ -0.68
PHGDH-222	ENST00000641587	HPS4	Q9NQG7	708 aa		10.82	□□□□□ -0.68
PHGDH-222	ENST00000641587	ANGPTL2	Q9UKU9	493 aa		10.82	□□□□□ -0.68
PHGDH-222	ENST00000641587	CCL26	Q9Y258	94 aa		10.82	□□□□□ -0.68
PHGDH-222	ENST00000641587	SPEG	Q15772	3267 aa		10.82	□□□□□ -0.68
PHGDH-222	ENST00000641587	MYO16	Q9Y6X6	1858 aa		10.82	□□□□□ -0.68
PHGDH-222	ENST00000641587	EGF	P01133	1207 aa		10.81	□□□□□ -0.68
PHGDH-222	ENST00000641587	KRT18	P05783	430 aa	Known RBP	10.81	□□□□□ -0.68
PHGDH-222	ENST00000641587	NFIC	P08651	508 aa		10.81	□□□□□ -0.68
PHGDH-222	ENST00000641587	CCDC192	P0DO97	292 aa		10.81	□□□□□ -0.68
PHGDH-222	ENST00000641587	ODC1	P11926	461 aa		10.81	□□□□□ -0.68
PHGDH-222	ENST00000641587	ARSA	P15289	507 aa		10.81	□□□□□ -0.68
PHGDH-222	ENST00000641587	TYMP	P19971	482 aa		10.81	□□□□□ -0.68
PHGDH-222	ENST00000641587	CYP3A5	P20815	502 aa		10.81	□□□□□ -0.68
PHGDH-222	ENST00000641587	HOXA6	P31267	233 aa		10.81	□□□□□ -0.68
PHGDH-222	ENST00000641587	RAP1GAP	P47736	663 aa		10.81	□□□□□ -0.68
PHGDH-222	ENST00000641587	LIMK1	P53667	647 aa		10.81	□□□□□ -0.68
PHGDH-222	ENST00000641587	SLC12A3	P55017	1021 aa		10.81	□□□□□ -0.68
PHGDH-222	ENST00000641587	LILRA4	P59901	499 aa		10.81	□□□□□ -0.68
PHGDH-222	ENST00000641587	MYBPC2	Q14324	1141 aa		10.81	□□□□□ -0.68
PHGDH-222	ENST00000641587	POSTN	Q15063	836 aa		10.81	□□□□□ -0.68
PHGDH-222	ENST00000641587	ITPRIPL2	Q3MIP1	535 aa		10.81	□□□□□ -0.68
PHGDH-222	ENST00000641587	ARHGAP15	Q53QZ3	475 aa		10.81	□□□□□ -0.68
PHGDH-222	ENST00000641587	STPG1	Q5TH74	334 aa		10.81	□□□□□ -0.68
PHGDH-222	ENST00000641587	JADE1	Q6IE81	842 aa		10.81	□□□□□ -0.68
PHGDH-222	ENST00000641587	SV2B	Q7L1I2	683 aa		10.81	□□□□□ -0.68
PHGDH-222	ENST00000641587	HAUS6	Q7Z4H7	955 aa		10.81	□□□□□ -0.68
PHGDH-222	ENST00000641587	SYT2	Q8N9I0	419 aa	Predicted RBP	10.81	□□□□□ -0.68
PHGDH-222	ENST00000641587	LRRC15	Q8TF66	581 aa		10.81	□□□□□ -0.68
PHGDH-222	ENST00000641587	EBF3	Q9H4W6	596 aa		10.81	□□□□□ -0.68
PHGDH-222	ENST00000641587	PLEKHA5	Q9HAU0	1116 aa		10.81	□□□□□ -0.68
PHGDH-222	ENST00000641587	FBRSL1	Q9HCM7	1045 aa	Known RBP	10.81	□□□□□ -0.68
PHGDH-222	ENST00000641587	GKN1	Q9NS71	199 aa		10.81	□□□□□ -0.68
PHGDH-222	ENST00000641587	BLOC1S4	Q9NUP1	217 aa		10.81	□□□□□ -0.68
PHGDH-222	ENST00000641587	OBP2A	Q9NY56	170 aa		10.81	□□□□□ -0.68
PHGDH-222	ENST00000641587	ASB3	Q9Y575	518 aa		10.81	□□□□□ -0.68
PHGDH-222	ENST00000641587	CHD6	Q8TD26	2715 aa		10.8	□□□□□ -0.68
PHGDH-222	ENST00000641587	KIAA1549L	Q6ZVL6	1849 aa		10.8	□□□□□ -0.68
PHGDH-222	ENST00000641587	SYCE3	A1L190	88 aa		10.8	□□□□□ -0.68
PHGDH-222	ENST00000641587	TISP43	B9A030	160 aa		10.8	□□□□□ -0.68
PHGDH-222	ENST00000641587	DCLK1	O15075	740 aa		10.8	□□□□□ -0.68
PHGDH-222	ENST00000641587	RNF40	O75150	1001 aa		10.8	□□□□□ -0.68
PHGDH-222	ENST00000641587	LETM1	O95202	739 aa	Predicted RBP	10.8	□□□□□ -0.68
PHGDH-222	ENST00000641587	PRR29	P0C7W0	189 aa		10.8	□□□□□ -0.68
PHGDH-222	ENST00000641587	ZNF806	P0C7X5	589 aa		10.8	□□□□□ -0.68
PHGDH-222	ENST00000641587	PLA2G4B	P0C869	781 aa		10.8	□□□□□ -0.68
PHGDH-222	ENST00000641587	MPL	P40238	635 aa		10.8	□□□□□ -0.68
PHGDH-222	ENST00000641587	GPR15	P49685	360 aa		10.8	□□□□□ -0.68
PHGDH-222	ENST00000641587	LIG4	P49917	911 aa		10.8	□□□□□ -0.68
PHGDH-222	ENST00000641587	SMTN	P53814	917 aa		10.8	□□□□□ -0.68
PHGDH-222	ENST00000641587	NCKAP1L	P55160	1127 aa		10.8	□□□□□ -0.68
PHGDH-222	ENST00000641587	AMPD3	Q01432	767 aa		10.8	□□□□□ -0.68
PHGDH-222	ENST00000641587	PNOC	Q13519	176 aa		10.8	□□□□□ -0.68
PHGDH-222	ENST00000641587	ZSCAN23	Q3MJ62	389 aa		10.8	□□□□□ -0.68
PHGDH-222	ENST00000641587	ARSH	Q5FYA8	562 aa		10.8	□□□□□ -0.68
PHGDH-222	ENST00000641587	TMEM196	Q5HYL7	178 aa		10.8	□□□□□ -0.68
PHGDH-222	ENST00000641587	PLA2G2C	Q5R387	149 aa		10.8	□□□□□ -0.68
PHGDH-222	ENST00000641587	SPATA1	Q5VX52	437 aa		10.8	□□□□□ -0.68
PHGDH-222	ENST00000641587	C9orf57	Q5W0N0	161 aa		10.8	□□□□□ -0.68
PHGDH-222	ENST00000641587	ARMCX5	Q6P1M9	558 aa		10.8	□□□□□ -0.68
PHGDH-222	ENST00000641587	SLC39A4	Q6P5W5	647 aa		10.8	□□□□□ -0.68
PHGDH-222	ENST00000641587	CACNA2D4	Q7Z3S7	1137 aa		10.8	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms