RNA–Protein interactions for RNA: ENST00000641009.1

LINC00339-211, long intergenic non-protein coding RNA 339, humanhuman

Gene LINC00339, Length 1,450 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-211ENST00000641009 ANKRD36BP1Q96IX9 119 aa14.96□□□□□ -0.01
LINC00339-211ENST00000641009 GCNAQ96QF7 691 aa14.96□□□□□ -0.01
LINC00339-211ENST00000641009 SMG9Q9H0W8 520 aaKnown RBP14.96□□□□□ -0.01
LINC00339-211ENST00000641009 TASP1Q9H6P5 420 aa14.96□□□□□ -0.01
LINC00339-211ENST00000641009 INTS13Q9NVM9 706 aa14.96□□□□□ -0.01
LINC00339-211ENST00000641009 GDAP2Q9NXN4 497 aa14.96□□□□□ -0.01
LINC00339-211ENST00000641009 HSPBP1Q9NZL4 362 aa14.96□□□□□ -0.01
LINC00339-211ENST00000641009 CEP250Q9BV73 2442 aa14.96□□□□□ -0.01
LINC00339-211ENST00000641009 MYH10P35580 1976 aa14.96□□□□□ -0.02
LINC00339-211ENST00000641009 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.95□□□□□ -0.02
LINC00339-211ENST00000641009 KIAA0391O15091 583 aaKnown RBP14.95□□□□□ -0.02
LINC00339-211ENST00000641009 EIF3DO15371 548 aaKnown RBP eCLIP14.95□□□□□ -0.02
LINC00339-211ENST00000641009 PRPF40AO75400 957 aaKnown RBP14.95□□□□□ -0.02
LINC00339-211ENST00000641009 CDC25CP30307 473 aa14.95□□□□□ -0.02
LINC00339-211ENST00000641009 RBP5P82980 135 aa14.95□□□□□ -0.02
LINC00339-211ENST00000641009 FAM26FQ5R3K3 315 aa14.95□□□□□ -0.02
LINC00339-211ENST00000641009 SDHAF4Q5VUM1 108 aa14.95□□□□□ -0.02
LINC00339-211ENST00000641009 CNNM4Q6P4Q7 775 aa14.95□□□□□ -0.02
LINC00339-211ENST00000641009 TMEM150AQ86TG1 271 aa14.95□□□□□ -0.02
LINC00339-211ENST00000641009 TMEM86AQ8N2M4 240 aa14.95□□□□□ -0.02
LINC00339-211ENST00000641009 TTC8Q8TAM2 541 aa14.95□□□□□ -0.02
LINC00339-211ENST00000641009 ZNF507Q8TCN5 953 aa14.95□□□□□ -0.02
LINC00339-211ENST00000641009 C7orf25Q9BPX7 421 aa14.95□□□□□ -0.02
LINC00339-211ENST00000641009 ACBD6Q9BR61 282 aa14.95□□□□□ -0.02
LINC00339-211ENST00000641009 SLC46A2Q9BY10 475 aa14.95□□□□□ -0.02
LINC00339-211ENST00000641009 BLZF1Q9H2G9 400 aa14.95□□□□□ -0.02
LINC00339-211ENST00000641009 CHRDQ9H2X0 955 aa14.95□□□□□ -0.02
LINC00339-211ENST00000641009 LMAN1LQ9HAT1 526 aa14.95□□□□□ -0.02
LINC00339-211ENST00000641009 PRMT8Q9NR22 394 aaPredicted RBP14.95□□□□□ -0.02
LINC00339-211ENST00000641009 GTSE1Q9NYZ3 720 aa14.95□□□□□ -0.02
LINC00339-211ENST00000641009 GTF3C4Q9UKN8 822 aa14.95□□□□□ -0.02
LINC00339-211ENST00000641009 RALGAPA1Q6GYQ0 2036 aa14.95□□□□□ -0.02
LINC00339-211ENST00000641009 MYO16Q9Y6X6 1858 aa14.95□□□□□ -0.02
LINC00339-211ENST00000641009 TGFB1I1O43294 461 aa14.95□□□□□ -0.02
LINC00339-211ENST00000641009 KINO60870 393 aaKnown RBP14.95□□□□□ -0.02
LINC00339-211ENST00000641009 HMGA1P17096 107 aaKnown RBP14.95□□□□□ -0.02
LINC00339-211ENST00000641009 CYP2F1P24903 491 aa14.95□□□□□ -0.02
LINC00339-211ENST00000641009 ME1P48163 572 aa14.95□□□□□ -0.02
LINC00339-211ENST00000641009 KPNA1P52294 538 aaPredicted RBP14.95□□□□□ -0.02
LINC00339-211ENST00000641009 MYL7Q01449 175 aa14.95□□□□□ -0.02
LINC00339-211ENST00000641009 NFE2Q16621 373 aaPredicted RBP14.95□□□□□ -0.02
LINC00339-211ENST00000641009 DDR2Q16832 855 aa14.95□□□□□ -0.02
LINC00339-211ENST00000641009 SOWAHAQ2M3V2 549 aa14.95□□□□□ -0.02
LINC00339-211ENST00000641009 INTS6LQ5JSJ4 861 aaKnown RBP14.95□□□□□ -0.02
LINC00339-211ENST00000641009 NELFCDQ8IXH7 590 aa14.95□□□□□ -0.02
LINC00339-211ENST00000641009 ADGRF2Q8IZF7 708 aa14.95□□□□□ -0.02
LINC00339-211ENST00000641009 TOP6BLQ8N6T0 577 aa14.95□□□□□ -0.02
LINC00339-211ENST00000641009 RDH13Q8NBN7 331 aa14.95□□□□□ -0.02
LINC00339-211ENST00000641009 LEO1Q8WVC0 666 aaPredicted RBP14.95□□□□□ -0.02
LINC00339-211ENST00000641009 PKMYT1Q99640 499 aa14.95□□□□□ -0.02
LINC00339-211ENST00000641009 HINFPQ9BQA5 517 aa14.95□□□□□ -0.02
LINC00339-211ENST00000641009 AGPAT3Q9NRZ7 376 aa14.95□□□□□ -0.02
LINC00339-211ENST00000641009 PCDHA7Q9UN72 937 aa14.95□□□□□ -0.02
LINC00339-211ENST00000641009 MAGED2Q9UNF1 606 aaPredicted RBP14.95□□□□□ -0.02
LINC00339-211ENST00000641009 CLIC2O15247 247 aa14.94□□□□□ -0.02
LINC00339-211ENST00000641009 TNNC2P02585 160 aa14.94□□□□□ -0.02
LINC00339-211ENST00000641009 F11P03951 625 aa14.94□□□□□ -0.02
LINC00339-211ENST00000641009 CHRNB1P11230 501 aa14.94□□□□□ -0.02
LINC00339-211ENST00000641009 NLRP12P59046 1061 aa14.94□□□□□ -0.02
LINC00339-211ENST00000641009 TNK2Q07912 1038 aa14.94□□□□□ -0.02
LINC00339-211ENST00000641009 EHHADHQ08426 723 aa14.94□□□□□ -0.02
LINC00339-211ENST00000641009 SNRNP35Q16560 246 aaKnown RBP14.94□□□□□ -0.02
LINC00339-211ENST00000641009 DUOXA2Q1HG44 320 aa14.94□□□□□ -0.02
LINC00339-211ENST00000641009 ARHGAP29Q52LW3 1261 aa14.94□□□□□ -0.02
LINC00339-211ENST00000641009 TXNDC11Q6PKC3 985 aa14.94□□□□□ -0.02
LINC00339-211ENST00000641009 UNC13DQ70J99 1090 aa14.94□□□□□ -0.02
LINC00339-211ENST00000641009 MAB21L3Q8N8X9 362 aa14.94□□□□□ -0.02
LINC00339-211ENST00000641009 SUMF1Q8NBK3 374 aa14.94□□□□□ -0.02
LINC00339-211ENST00000641009 BPIFB1Q8TDL5 484 aa14.94□□□□□ -0.02
LINC00339-211ENST00000641009 SCFD1Q8WVM8 642 aa14.94□□□□□ -0.02
LINC00339-211ENST00000641009 HPDLQ96IR7 371 aa14.94□□□□□ -0.02
LINC00339-211ENST00000641009 OBP2AQ9NY56 170 aa14.94□□□□□ -0.02
LINC00339-211ENST00000641009 R3HCC1Q9Y3T6 440 aaKnown RBP14.94□□□□□ -0.02
LINC00339-211ENST00000641009 PCDHGA2Q9Y5H1 932 aa14.94□□□□□ -0.02
LINC00339-211ENST00000641009 SPECC1L-ADORA2AF8WAN1 911 aa14.93□□□□□ -0.02
LINC00339-211ENST00000641009 GABRDO14764 452 aa14.93□□□□□ -0.02
LINC00339-211ENST00000641009 CSH1P0DML2 217 aa14.93□□□□□ -0.02
LINC00339-211ENST00000641009 CSH2P0DML3 217 aa14.93□□□□□ -0.02
LINC00339-211ENST00000641009 WEE1P30291 646 aa14.93□□□□□ -0.02
LINC00339-211ENST00000641009 AFMP43652 599 aa14.93□□□□□ -0.02
LINC00339-211ENST00000641009 LHX1P48742 406 aa14.93□□□□□ -0.02
LINC00339-211ENST00000641009 CYP2J2P51589 502 aa14.93□□□□□ -0.02
LINC00339-211ENST00000641009 MLLT6P55198 1093 aaPredicted RBP14.93□□□□□ -0.02
LINC00339-211ENST00000641009 DNM1Q05193 864 aaKnown RBP14.93□□□□□ -0.02
LINC00339-211ENST00000641009 MYO1EQ12965 1108 aa14.93□□□□□ -0.02
LINC00339-211ENST00000641009 CUL4BQ13620 913 aa14.93□□□□□ -0.02
LINC00339-211ENST00000641009 SURF1Q15526 300 aa14.93□□□□□ -0.02
LINC00339-211ENST00000641009 WDR44Q5JSH3 913 aa14.93□□□□□ -0.02
LINC00339-211ENST00000641009 RESP18Q5W5W9 173 aa14.93□□□□□ -0.02
LINC00339-211ENST00000641009 WDR49Q8IV35 697 aa14.93□□□□□ -0.02
LINC00339-211ENST00000641009 GRAMD1CQ8IYS0 662 aa14.93□□□□□ -0.02
LINC00339-211ENST00000641009 CMTM8Q8IZV2 173 aa14.93□□□□□ -0.02
LINC00339-211ENST00000641009 DCLK2Q8N568 766 aa14.93□□□□□ -0.02
LINC00339-211ENST00000641009 ZBTB44Q8NCP5 570 aa14.93□□□□□ -0.02
LINC00339-211ENST00000641009 KBTBD7Q8WVZ9 684 aa14.93□□□□□ -0.02
LINC00339-211ENST00000641009 ATRIPQ8WXE1 791 aa14.93□□□□□ -0.02
LINC00339-211ENST00000641009 NELL1Q92832 810 aa14.93□□□□□ -0.02
LINC00339-211ENST00000641009 C8orf33Q9H7E9 229 aaPredicted RBP14.93□□□□□ -0.02
LINC00339-211ENST00000641009 MAGEF1Q9HAY2 307 aa14.93□□□□□ -0.02
LINC00339-211ENST00000641009 KIAA1586Q9HCI6 787 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms