RNA–Protein interactions for RNA: ENST00000640872.1

PAX6-280, Transcript of paired box 6, humanhuman

TSL 1 (best)

Gene PAX6, Length 2,367 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-280ENST00000640872 PAFAH2Q99487 392 aa14.4□□□□□ -0.1
PAX6-280ENST00000640872 SENP7Q9BQF6 1050 aa14.4□□□□□ -0.1
PAX6-280ENST00000640872 WDR83Q9BRX9 315 aaKnown RBP14.4□□□□□ -0.1
PAX6-280ENST00000640872 PHACTR1Q9C0D0 580 aa14.4□□□□□ -0.1
PAX6-280ENST00000640872 C12orf65Q9H3J6 166 aaKnown RBP14.4□□□□□ -0.1
PAX6-280ENST00000640872 SYNCQ9H7C4 482 aa14.4□□□□□ -0.1
PAX6-280ENST00000640872 ETAA1Q9NY74 926 aa14.4□□□□□ -0.1
PAX6-280ENST00000640872 STX18Q9P2W9 335 aaKnown RBP14.4□□□□□ -0.1
PAX6-280ENST00000640872 IP6K2Q9UHH9 426 aa14.4□□□□□ -0.1
PAX6-280ENST00000640872 UBIAD1Q9Y5Z9 338 aa14.4□□□□□ -0.1
PAX6-280ENST00000640872 ENTPD3O75355 529 aa14.39□□□□□ -0.11
PAX6-280ENST00000640872 SERPINB3P29508 390 aa14.39□□□□□ -0.11
PAX6-280ENST00000640872 SSTR1P30872 391 aa14.39□□□□□ -0.11
PAX6-280ENST00000640872 PTPN7P35236 360 aa14.39□□□□□ -0.11
PAX6-280ENST00000640872 ARFIP2P53365 341 aa14.39□□□□□ -0.11
PAX6-280ENST00000640872 FKBP1AP62942 108 aaKnown RBP14.39□□□□□ -0.11
PAX6-280ENST00000640872 GAD2Q05329 585 aa14.39□□□□□ -0.11
PAX6-280ENST00000640872 ZNF252P-AS1Q0IIN9 211 aa14.39□□□□□ -0.11
PAX6-280ENST00000640872 AP1B1Q10567 949 aa14.39□□□□□ -0.11
PAX6-280ENST00000640872 SEPT7Q16181 437 aaKnown RBP14.39□□□□□ -0.11
PAX6-280ENST00000640872 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.39□□□□□ -0.11
PAX6-280ENST00000640872 ALKBH8Q96BT7 664 aaKnown RBP14.39□□□□□ -0.11
PAX6-280ENST00000640872 ACSS3Q9H6R3 686 aa14.39□□□□□ -0.11
PAX6-280ENST00000640872 KMT5AQ9NQR1 393 aa14.39□□□□□ -0.11
PAX6-280ENST00000640872 TAS2R1Q9NYW7 299 aa14.39□□□□□ -0.11
PAX6-280ENST00000640872 SCOCQ9UIL1 159 aa14.39□□□□□ -0.11
PAX6-280ENST00000640872 COL2A1P02458 1487 aaPredicted RBP14.39□□□□□ -0.11
PAX6-280ENST00000640872 hCG_1818297A0A087WSY0 165 aa14.39□□□□□ -0.11
PAX6-280ENST00000640872 GOLGA8SH3BPF8 625 aa14.39□□□□□ -0.11
PAX6-280ENST00000640872 GOLGA8MH3BSY2 632 aa14.39□□□□□ -0.11
PAX6-280ENST00000640872 TGDSO95455 350 aa14.39□□□□□ -0.11
PAX6-280ENST00000640872 GSTA2P09210 222 aa14.39□□□□□ -0.11
PAX6-280ENST00000640872 DHRS4L1P0CG22 281 aa14.39□□□□□ -0.11
PAX6-280ENST00000640872 PHBP35232 272 aa14.39□□□□□ -0.11
PAX6-280ENST00000640872 RPL7AP62424 266 aaKnown RBP14.39□□□□□ -0.11
PAX6-280ENST00000640872 CLDN10P78369 228 aa14.39□□□□□ -0.11
PAX6-280ENST00000640872 MSS51Q4VC12 460 aa14.39□□□□□ -0.11
PAX6-280ENST00000640872 XKR9Q5GH70 373 aa14.39□□□□□ -0.11
PAX6-280ENST00000640872 LRRC38Q5VT99 294 aa14.39□□□□□ -0.11
PAX6-280ENST00000640872 FOXB2Q5VYV0 432 aa14.39□□□□□ -0.11
PAX6-280ENST00000640872 LRRC6Q86X45 466 aa14.39□□□□□ -0.11
PAX6-280ENST00000640872 CDAN1Q8IWY9 1227 aa14.39□□□□□ -0.11
PAX6-280ENST00000640872 ATP11CQ8NB49 1132 aa14.39□□□□□ -0.11
PAX6-280ENST00000640872 DCAKDQ8WVC6 231 aa14.39□□□□□ -0.11
PAX6-280ENST00000640872 SPIRE2Q8WWL2 714 aa14.39□□□□□ -0.11
PAX6-280ENST00000640872 TRAPPC9Q96Q05 1148 aa14.39□□□□□ -0.11
PAX6-280ENST00000640872 CSRNP1Q96S65 589 aa14.39□□□□□ -0.11
PAX6-280ENST00000640872 NTPCRQ9BSD7 190 aaKnown RBP14.39□□□□□ -0.11
PAX6-280ENST00000640872 TMEM121Q9BTD3 319 aa14.39□□□□□ -0.11
PAX6-280ENST00000640872 TSSK1BQ9BXA7 367 aa14.39□□□□□ -0.11
PAX6-280ENST00000640872 TMEM120AQ9BXJ8 343 aa14.39□□□□□ -0.11
PAX6-280ENST00000640872 FBXO6Q9NRD1 293 aaPredicted RBP14.39□□□□□ -0.11
PAX6-280ENST00000640872 METTL5Q9NRN9 209 aaKnown RBP14.39□□□□□ -0.11
PAX6-280ENST00000640872 PARVAQ9NVD7 372 aa14.39□□□□□ -0.11
PAX6-280ENST00000640872 SERPINA10Q9UK55 444 aa14.39□□□□□ -0.11
PAX6-280ENST00000640872 MTO1Q9Y2Z2 717 aaKnown RBP14.39□□□□□ -0.11
PAX6-280ENST00000640872 IVNS1ABPQ9Y6Y0 642 aa14.39□□□□□ -0.11
PAX6-280ENST00000640872 PLA2G6O60733 806 aa14.38□□□□□ -0.11
PAX6-280ENST00000640872 HLA-DRAP01903 254 aa14.38□□□□□ -0.11
PAX6-280ENST00000640872 GARTP22102 1010 aa14.38□□□□□ -0.11
PAX6-280ENST00000640872 SSTR3P32745 418 aaPredicted RBP14.38□□□□□ -0.11
PAX6-280ENST00000640872 PSMC5P62195 406 aa14.38□□□□□ -0.11
PAX6-280ENST00000640872 MRPS9P82933 396 aaKnown RBP14.38□□□□□ -0.11
PAX6-280ENST00000640872 KLHL38Q2WGJ6 581 aa14.38□□□□□ -0.11
PAX6-280ENST00000640872 ZACNQ401N2 412 aa14.38□□□□□ -0.11
PAX6-280ENST00000640872 PPP1R15BQ5SWA1 713 aa14.38□□□□□ -0.11
PAX6-280ENST00000640872 FAM91A1Q658Y4 838 aa14.38□□□□□ -0.11
PAX6-280ENST00000640872 LMBRD2Q68DH5 695 aaPredicted RBP14.38□□□□□ -0.11
PAX6-280ENST00000640872 SPOPLQ6IQ16 392 aa14.38□□□□□ -0.11
PAX6-280ENST00000640872 TRMT1LQ7Z2T5 733 aaKnown RBP14.38□□□□□ -0.11
PAX6-280ENST00000640872 CHSY1Q86X52 802 aa14.38□□□□□ -0.11
PAX6-280ENST00000640872 SLC35B2Q8TB61 432 aa14.38□□□□□ -0.11
PAX6-280ENST00000640872 GATA6Q92908 595 aa14.38□□□□□ -0.11
PAX6-280ENST00000640872 MCUR1Q96AQ8 359 aa14.38□□□□□ -0.11
PAX6-280ENST00000640872 FAM213AQ9BRX8 229 aa14.38□□□□□ -0.11
PAX6-280ENST00000640872 ANKEF1Q9NU02 776 aa14.38□□□□□ -0.11
PAX6-280ENST00000640872 CPSF2Q9P2I0 782 aaKnown RBP14.38□□□□□ -0.11
PAX6-280ENST00000640872 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.38□□□□□ -0.11
PAX6-280ENST00000640872 SNCAIPQ9Y6H5 919 aa14.38□□□□□ -0.11
PAX6-280ENST00000640872 CLRN2A0PK11 232 aa14.38□□□□□ -0.11
PAX6-280ENST00000640872 TMEM191CA6NGB0 347 aa14.38□□□□□ -0.11
PAX6-280ENST00000640872 GOLGA8RI6L899 631 aa14.38□□□□□ -0.11
PAX6-280ENST00000640872 PIAS1O75925 651 aa14.38□□□□□ -0.11
PAX6-280ENST00000640872 RAD17O75943 681 aa14.38□□□□□ -0.11
PAX6-280ENST00000640872 DLDP09622 509 aaKnown RBP14.38□□□□□ -0.11
PAX6-280ENST00000640872 TMEM191BP0C7N4 346 aa14.38□□□□□ -0.11
PAX6-280ENST00000640872 RARBP10826 455 aa14.38□□□□□ -0.11
PAX6-280ENST00000640872 GNA15P30679 374 aa14.38□□□□□ -0.11
PAX6-280ENST00000640872 ETV4P43268 484 aa14.38□□□□□ -0.11
PAX6-280ENST00000640872 PRKD1Q15139 912 aaPredicted RBP14.38□□□□□ -0.11
PAX6-280ENST00000640872 BRDTQ58F21 947 aaPredicted RBP14.38□□□□□ -0.11
PAX6-280ENST00000640872 WDR44Q5JSH3 913 aa14.38□□□□□ -0.11
PAX6-280ENST00000640872 FNBP1LQ5T0N5 605 aa14.38□□□□□ -0.11
PAX6-280ENST00000640872 ANKRD22Q5VYY1 191 aa14.38□□□□□ -0.11
PAX6-280ENST00000640872 MTHFD1LQ6UB35 978 aa14.38□□□□□ -0.11
PAX6-280ENST00000640872 ZC3H18Q86VM9 953 aaKnown RBP14.38□□□□□ -0.11
PAX6-280ENST00000640872 SAMD3Q8N6K7 520 aa14.38□□□□□ -0.11
PAX6-280ENST00000640872 PYROXD1Q8WU10 500 aa14.38□□□□□ -0.11
PAX6-280ENST00000640872 HAUS1Q96CS2 278 aa14.38□□□□□ -0.11
PAX6-280ENST00000640872 CAMKK2Q96RR4 588 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms