RNA–Protein interactions for RNA: ENST00000640853.1

LPP-222, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPP, Length 18,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-222ENST00000640853 KCNQ5Q9NR82 932 aa3.19□□□□□ -1.9
LPP-222ENST00000640853 ANKEF1Q9NU02 776 aa3.19□□□□□ -1.9
LPP-222ENST00000640853 TYW5A2RUC4 315 aaKnown RBP3.19□□□□□ -1.9
LPP-222ENST00000640853 HNRNPCP07910 306 aaKnown RBP eCLIP3.19□□□□□ -1.95e-6■■■□□ 15.4
LPP-222ENST00000640853 NR2C2P49116 596 aa3.19□□□□□ -1.9
LPP-222ENST00000640853 SLC34A1Q06495 639 aa3.19□□□□□ -1.9
LPP-222ENST00000640853 NFX1Q12986 1120 aaKnown RBP3.19□□□□□ -1.9
LPP-222ENST00000640853 RBBP7Q16576 425 aa3.19□□□□□ -1.9
LPP-222ENST00000640853 ERMARDQ5T6L9 678 aa3.19□□□□□ -1.9
LPP-222ENST00000640853 PALB2Q86YC2 1186 aa3.19□□□□□ -1.9
LPP-222ENST00000640853 SCUBE1Q8IWY4 988 aa3.19□□□□□ -1.9
LPP-222ENST00000640853 GPD1LQ8N335 351 aa3.19□□□□□ -1.9
LPP-222ENST00000640853 SCFD2Q8WU76 684 aa3.19□□□□□ -1.9
LPP-222ENST00000640853 BHMTQ93088 406 aa3.19□□□□□ -1.9
LPP-222ENST00000640853 SMARCAD1Q9H4L7 1026 aa3.19□□□□□ -1.9
LPP-222ENST00000640853 ZBBXA8MT70 800 aa3.19□□□□□ -1.9
LPP-222ENST00000640853 MYO1DO94832 1006 aa3.19□□□□□ -1.9
LPP-222ENST00000640853 DPEP1P16444 411 aa3.19□□□□□ -1.9
LPP-222ENST00000640853 MSR1P21757 451 aa3.19□□□□□ -1.9
LPP-222ENST00000640853 CALB2P22676 271 aa3.19□□□□□ -1.9
LPP-222ENST00000640853 FECHP22830 423 aa3.19□□□□□ -1.9
LPP-222ENST00000640853 CDK7P50613 346 aa3.19□□□□□ -1.9
LPP-222ENST00000640853 ACTR2P61160 394 aa3.19□□□□□ -1.9
LPP-222ENST00000640853 KRT72Q14CN4 511 aa3.19□□□□□ -1.9
LPP-222ENST00000640853 XKR3Q5GH77 459 aa3.19□□□□□ -1.9
LPP-222ENST00000640853 ABI1Q8IZP0 508 aa3.19□□□□□ -1.9
LPP-222ENST00000640853 EME1Q96AY2 570 aa3.19□□□□□ -1.9
LPP-222ENST00000640853 SLC13A4Q9UKG4 626 aa3.19□□□□□ -1.9
LPP-222ENST00000640853 SPTBN1Q01082 2364 aaKnown RBP3.19□□□□□ -1.9
LPP-222ENST00000640853 ZSCAN5CA6NGD5 496 aaPredicted RBP3.18□□□□□ -1.9
LPP-222ENST00000640853 ZC3H11AO75152 810 aaKnown RBP eCLIP3.18□□□□□ -1.9
LPP-222ENST00000640853 STX5Q13190 355 aa3.18□□□□□ -1.9
LPP-222ENST00000640853 XRCC4Q13426 336 aa3.18□□□□□ -1.9
LPP-222ENST00000640853 POTEGQ6S5H5 508 aa3.18□□□□□ -1.9
LPP-222ENST00000640853 ZNF518BQ9C0D4 1074 aa3.18□□□□□ -1.9
LPP-222ENST00000640853 HACD3Q9P035 362 aa3.18□□□□□ -1.9
LPP-222ENST00000640853 TEKT2Q9UIF3 430 aa3.18□□□□□ -1.9
LPP-222ENST00000640853 PHTF1Q9UMS5 762 aa3.18□□□□□ -1.9
LPP-222ENST00000640853 LZTS1Q9Y250 596 aa3.18□□□□□ -1.9
LPP-222ENST00000640853 HNRNPCL2B2RXH8 293 aa3.18□□□□□ -1.9
LPP-222ENST00000640853 CST8O60676 142 aa3.18□□□□□ -1.9
LPP-222ENST00000640853 DAB1O75553 588 aa3.18□□□□□ -1.9
LPP-222ENST00000640853 KRT75O95678 551 aa3.18□□□□□ -1.9
LPP-222ENST00000640853 HABP4Q5JVS0 413 aaKnown RBP3.18□□□□□ -1.9
LPP-222ENST00000640853 EFL1Q7Z2Z2 1120 aaKnown RBP3.18□□□□□ -1.9
LPP-222ENST00000640853 SPDYE1Q8NFV5 336 aaPredicted RBP3.18□□□□□ -1.9
LPP-222ENST00000640853 SENP7Q9BQF6 1050 aa3.18□□□□□ -1.9
LPP-222ENST00000640853 ETAA1Q9NY74 926 aa3.18□□□□□ -1.9
LPP-222ENST00000640853 SLC24A2Q9UI40 661 aa3.18□□□□□ -1.9
LPP-222ENST00000640853 NCOR1O75376 2440 aa3.18□□□□□ -1.9
LPP-222ENST00000640853 ADAMTS13Q76LX8 1427 aa3.18□□□□□ -1.9
LPP-222ENST00000640853 AIM2O14862 343 aa3.18□□□□□ -1.9
LPP-222ENST00000640853 MAGEA8P43361 318 aa3.18□□□□□ -1.9
LPP-222ENST00000640853 CACNA2D1P54289 1103 aa3.18□□□□□ -1.9
LPP-222ENST00000640853 MAP3K10Q02779 954 aa3.18□□□□□ -1.9
LPP-222ENST00000640853 KRT17Q04695 432 aa3.18□□□□□ -1.9
LPP-222ENST00000640853 POU5F1BQ06416 359 aa3.18□□□□□ -1.9
LPP-222ENST00000640853 SEC23AQ15436 765 aa3.18□□□□□ -1.9
LPP-222ENST00000640853 EARS2Q5JPH6 523 aaKnown RBP3.18□□□□□ -1.9
LPP-222ENST00000640853 NLRP9Q7RTR0 991 aa3.18□□□□□ -1.9
LPP-222ENST00000640853 TBC1D16Q8TBP0 767 aa3.18□□□□□ -1.9
LPP-222ENST00000640853 BAP1Q92560 729 aa3.18□□□□□ -1.9
LPP-222ENST00000640853 FSD1LQ9BXM9 530 aa3.18□□□□□ -1.9
LPP-222ENST00000640853 BLOC1S6Q9UL45 172 aa3.18□□□□□ -1.9
LPP-222ENST00000640853 SNX5Q9Y5X3 404 aa3.18□□□□□ -1.9
LPP-222ENST00000640853 AKAP3O75969 853 aa3.18□□□□□ -1.9
LPP-222ENST00000640853 GFAPP14136 432 aa3.18□□□□□ -1.9
LPP-222ENST00000640853 EPHB1P54762 984 aa3.18□□□□□ -1.9
LPP-222ENST00000640853 SLC12A3P55017 1021 aa3.18□□□□□ -1.9
LPP-222ENST00000640853 WLSQ5T9L3 541 aa3.18□□□□□ -1.9
LPP-222ENST00000640853 LRRC8EQ6NSJ5 796 aa3.18□□□□□ -1.9
LPP-222ENST00000640853 TRIM69Q86WT6 500 aa3.18□□□□□ -1.9
LPP-222ENST00000640853 TMPRSS6Q8IU80 811 aa3.18□□□□□ -1.9
LPP-222ENST00000640853 CYGBQ8WWM9 190 aa3.18□□□□□ -1.9
LPP-222ENST00000640853 RSAD1Q9HA92 442 aa3.18□□□□□ -1.9
LPP-222ENST00000640853 POTEMA6NI47 508 aa3.18□□□□□ -1.9
LPP-222ENST00000640853 RARAP10276 462 aa3.18□□□□□ -1.9
LPP-222ENST00000640853 EIF2AK2P19525 551 aaKnown RBP3.18□□□□□ -1.9
LPP-222ENST00000640853 TOMM20Q15388 145 aa3.18□□□□□ -1.9
LPP-222ENST00000640853 CALML6Q8TD86 181 aa3.18□□□□□ -1.9
LPP-222ENST00000640853 CCT7Q99832 543 aa3.18□□□□□ -1.9
LPP-222ENST00000640853 SCN3BQ9NY72 215 aa3.18□□□□□ -1.9
LPP-222ENST00000640853 VPS4BO75351 444 aa3.18□□□□□ -1.9
LPP-222ENST00000640853 SGPL1O95470 568 aa3.18□□□□□ -1.9
LPP-222ENST00000640853 WEE2P0C1S8 567 aa3.18□□□□□ -1.9
LPP-222ENST00000640853 FAM47EQ6ZV65 393 aa3.18□□□□□ -1.9
LPP-222ENST00000640853 C3orf67Q6ZVT6 689 aa3.18□□□□□ -1.9
LPP-222ENST00000640853 LPAR1Q92633 364 aa3.18□□□□□ -1.9
LPP-222ENST00000640853 IFT43Q96FT9 208 aa3.18□□□□□ -1.9
LPP-222ENST00000640853 INPP4AQ96PE3 977 aaPredicted RBP3.18□□□□□ -1.9
LPP-222ENST00000640853 POLR3FQ9H1D9 316 aaPredicted RBP3.18□□□□□ -1.9
LPP-222ENST00000640853 ARHGEF40Q8TER5 1519 aa3.18□□□□□ -1.9
LPP-222ENST00000640853 DDX3XO00571 662 aaKnown RBP eCLIP3.18□□□□□ -1.9
LPP-222ENST00000640853 KCNN4O15554 427 aa3.18□□□□□ -1.9
LPP-222ENST00000640853 LSM8O95777 96 aaKnown RBP3.18□□□□□ -1.9
LPP-222ENST00000640853 TRIM49P0CI25 452 aa3.18□□□□□ -1.9
LPP-222ENST00000640853 TRIM49CP0CI26 452 aa3.18□□□□□ -1.9
LPP-222ENST00000640853 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP3.18□□□□□ -1.9
LPP-222ENST00000640853 ZNF555Q8NEP9 628 aa3.18□□□□□ -1.9
LPP-222ENST00000640853 C11orf70Q9BRQ4 267 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms