RNA–Protein interactions for RNA: ENST00000640341.1

SCARB2-221, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 3,403 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-221ENST00000640341 CTAGE3PQ8IX95 158 aa15.35■□□□□ 0.05
SCARB2-221ENST00000640341 CCDC33Q8N5R6 958 aa15.35■□□□□ 0.05
SCARB2-221ENST00000640341 NLRP4Q96MN2 994 aa15.35■□□□□ 0.05
SCARB2-221ENST00000640341 PLCD4Q9BRC7 762 aa15.35■□□□□ 0.05
SCARB2-221ENST00000640341 NKX1-2Q9UD57 310 aaPredicted RBP15.35■□□□□ 0.05
SCARB2-221ENST00000640341 POLIQ9UNA4 740 aa15.35■□□□□ 0.05
SCARB2-221ENST00000640341 CFAP69A5D8W1 941 aa15.35■□□□□ 0.05
SCARB2-221ENST00000640341 OATP04181 439 aa15.35■□□□□ 0.05
SCARB2-221ENST00000640341 LONP2Q86WA8 852 aa15.35■□□□□ 0.05
SCARB2-221ENST00000640341 TEX2Q8IWB9 1127 aa15.35■□□□□ 0.05
SCARB2-221ENST00000640341 RNF149Q8NC42 400 aa15.35■□□□□ 0.05
SCARB2-221ENST00000640341 PRPF31Q8WWY3 499 aaKnown RBP15.35■□□□□ 0.05
SCARB2-221ENST00000640341 CGRRF1Q99675 332 aa15.35■□□□□ 0.05
SCARB2-221ENST00000640341 TXLNGQ9NUQ3 528 aa15.35■□□□□ 0.05
SCARB2-221ENST00000640341 SLC17A7Q9P2U7 560 aa15.35■□□□□ 0.05
SCARB2-221ENST00000640341 IKBKGQ9Y6K9 419 aa15.35■□□□□ 0.05
SCARB2-221ENST00000640341 USH1CQ9Y6N9 552 aa15.35■□□□□ 0.05
SCARB2-221ENST00000640341 hCG_1818297A0A087WSY0 165 aa15.34■□□□□ 0.05
SCARB2-221ENST00000640341 KRT3P12035 628 aa15.34■□□□□ 0.05
SCARB2-221ENST00000640341 PEX19P40855 299 aa15.34■□□□□ 0.05
SCARB2-221ENST00000640341 BACE1P56817 501 aa15.34■□□□□ 0.05
SCARB2-221ENST00000640341 YWHAGP61981 247 aaKnown RBP eCLIP15.34■□□□□ 0.05
SCARB2-221ENST00000640341 PSMC1P62191 440 aaKnown RBP15.34■□□□□ 0.05
SCARB2-221ENST00000640341 ZNF699Q32M78 642 aa15.34■□□□□ 0.05
SCARB2-221ENST00000640341 FAXCQ5TGI0 409 aa15.34■□□□□ 0.05
SCARB2-221ENST00000640341 SLFN12LQ6IEE8 588 aa15.34■□□□□ 0.05
SCARB2-221ENST00000640341 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.34■□□□□ 0.05
SCARB2-221ENST00000640341 KCTD6Q8NC69 237 aa15.34■□□□□ 0.05
SCARB2-221ENST00000640341 TCP10LQ8TDR4 215 aa15.34■□□□□ 0.05
SCARB2-221ENST00000640341 PAFAH2Q99487 392 aa15.34■□□□□ 0.05
SCARB2-221ENST00000640341 CYP39A1Q9NYL5 469 aa15.34■□□□□ 0.05
SCARB2-221ENST00000640341 PSMC3IPQ9P2W1 217 aaPredicted RBP15.34■□□□□ 0.05
SCARB2-221ENST00000640341 ENTPD5O75356 428 aa15.34■□□□□ 0.05
SCARB2-221ENST00000640341 CAPSQ13938 189 aa15.34■□□□□ 0.05
SCARB2-221ENST00000640341 TAF11Q15544 211 aa15.34■□□□□ 0.05
SCARB2-221ENST00000640341 OTOAQ7RTW8 1153 aa15.34■□□□□ 0.05
SCARB2-221ENST00000640341 TMEM174Q8WUU8 243 aa15.34■□□□□ 0.05
SCARB2-221ENST00000640341 UTP4Q969X6 686 aaKnown RBP15.34■□□□□ 0.05
SCARB2-221ENST00000640341 MIEF2Q96C03 454 aa15.34■□□□□ 0.05
SCARB2-221ENST00000640341 HACL1Q9UJ83 578 aa15.34■□□□□ 0.05
SCARB2-221ENST00000640341 ZFP69BQ9UJL9 534 aa15.34■□□□□ 0.05
SCARB2-221ENST00000640341 ZMYND8Q9ULU4 1186 aaPredicted RBP15.34■□□□□ 0.05
SCARB2-221ENST00000640341 RBBP6Q7Z6E9 1792 aaKnown RBP15.34■□□□□ 0.05
SCARB2-221ENST00000640341 F5H423 210 aaPredicted RBP15.34■□□□□ 0.05
SCARB2-221ENST00000640341 INO80B-WBP1J3KQ70 363 aa15.34■□□□□ 0.05
SCARB2-221ENST00000640341 AVILO75366 819 aa15.34■□□□□ 0.05
SCARB2-221ENST00000640341 CCND1P24385 295 aa15.34■□□□□ 0.05
SCARB2-221ENST00000640341 IL1R2P27930 398 aa15.34■□□□□ 0.05
SCARB2-221ENST00000640341 GPX6P59796 221 aa15.34■□□□□ 0.05
SCARB2-221ENST00000640341 MAPK6Q16659 721 aa15.34■□□□□ 0.05
SCARB2-221ENST00000640341 RNASEH2BQ5TBB1 312 aaKnown RBP15.34■□□□□ 0.05
SCARB2-221ENST00000640341 DENND1BQ6P3S1 775 aa15.34■□□□□ 0.05
SCARB2-221ENST00000640341 NPNTQ6UXI9 565 aa15.34■□□□□ 0.05
SCARB2-221ENST00000640341 MAGEC3Q8TD91 643 aa15.34■□□□□ 0.05
SCARB2-221ENST00000640341 ZNF75CPQ92670 426 aaPredicted RBP15.34■□□□□ 0.05
SCARB2-221ENST00000640341 ZNF570Q96NI8 536 aa15.34■□□□□ 0.05
SCARB2-221ENST00000640341 INO80BQ9C086 356 aaPredicted RBP15.34■□□□□ 0.05
SCARB2-221ENST00000640341 PORCNQ9H237 461 aa15.34■□□□□ 0.05
SCARB2-221ENST00000640341 A0A0B4J269 797 aa15.33■□□□□ 0.05
SCARB2-221ENST00000640341 H0YCG3 227 aa15.33■□□□□ 0.05
SCARB2-221ENST00000640341 CALB1P05937 261 aa15.33■□□□□ 0.05
SCARB2-221ENST00000640341 ANKRD20A2Q5SQ80 823 aa15.33■□□□□ 0.05
SCARB2-221ENST00000640341 ANKRD20A1Q5TYW2 823 aa15.33■□□□□ 0.05
SCARB2-221ENST00000640341 ANKRD20A3Q5VUR7 823 aa15.33■□□□□ 0.05
SCARB2-221ENST00000640341 RNF43Q68DV7 783 aa15.33■□□□□ 0.05
SCARB2-221ENST00000640341 LRRC6Q86X45 466 aa15.33■□□□□ 0.05
SCARB2-221ENST00000640341 UNC45BQ8IWX7 931 aa15.33■□□□□ 0.05
SCARB2-221ENST00000640341 L3MBTL3Q96JM7 780 aaPredicted RBP15.33■□□□□ 0.05
SCARB2-221ENST00000640341 TEPSINQ96N21 525 aa15.33■□□□□ 0.05
SCARB2-221ENST00000640341 TTC25Q96NG3 672 aa15.33■□□□□ 0.05
SCARB2-221ENST00000640341 PDLIM7Q9NR12 457 aa15.33■□□□□ 0.05
SCARB2-221ENST00000640341 METTL5Q9NRN9 209 aaKnown RBP15.33■□□□□ 0.05
SCARB2-221ENST00000640341 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.33■□□□□ 0.05
SCARB2-221ENST00000640341 YY1P25490 414 aa15.33■□□□□ 0.04
SCARB2-221ENST00000640341 CDKN2BP42772 138 aa15.33■□□□□ 0.04
SCARB2-221ENST00000640341 RAD23BP54727 409 aa15.33■□□□□ 0.04
SCARB2-221ENST00000640341 GEMIN4P57678 1058 aaKnown RBP15.33■□□□□ 0.04
SCARB2-221ENST00000640341 TNFAIP1Q13829 316 aa15.33■□□□□ 0.04
SCARB2-221ENST00000640341 MORF4L2Q15014 288 aa15.33■□□□□ 0.04
SCARB2-221ENST00000640341 WDR78Q5VTH9 848 aa15.33■□□□□ 0.04
SCARB2-221ENST00000640341 FYB2Q5VWT5 728 aa15.33■□□□□ 0.04
SCARB2-221ENST00000640341 SCYL2Q6P3W7 929 aa15.33■□□□□ 0.04
SCARB2-221ENST00000640341 NLRP9Q7RTR0 991 aa15.33■□□□□ 0.04
SCARB2-221ENST00000640341 ZNF280CQ8ND82 737 aa15.33■□□□□ 0.04
SCARB2-221ENST00000640341 TTC8Q8TAM2 541 aa15.33■□□□□ 0.04
SCARB2-221ENST00000640341 TRAPPC12Q8WVT3 735 aa15.33■□□□□ 0.04
SCARB2-221ENST00000640341 RAB3IPQ96QF0 476 aaPredicted RBP15.33■□□□□ 0.04
SCARB2-221ENST00000640341 NUDCD1Q96RS6 583 aa15.33■□□□□ 0.04
SCARB2-221ENST00000640341 TBC1D10AQ9BXI6 508 aa15.33■□□□□ 0.04
SCARB2-221ENST00000640341 XPO7Q9UIA9 1087 aaKnown RBP15.33■□□□□ 0.04
SCARB2-221ENST00000640341 ZNF214Q9UL59 606 aaPredicted RBP15.33■□□□□ 0.04
SCARB2-221ENST00000640341 TCEA3O75764 348 aa15.33■□□□□ 0.04
SCARB2-221ENST00000640341 LDHAP00338 332 aaKnown RBP15.33■□□□□ 0.04
SCARB2-221ENST00000640341 PDHA1P08559 390 aa15.33■□□□□ 0.04
SCARB2-221ENST00000640341 MMRN1Q13201 1228 aa15.33■□□□□ 0.04
SCARB2-221ENST00000640341 RIPK1Q13546 671 aa15.33■□□□□ 0.04
SCARB2-221ENST00000640341 CCDC125Q86Z20 511 aa15.33■□□□□ 0.04
SCARB2-221ENST00000640341 MICALL2Q8IY33 904 aa15.33■□□□□ 0.04
SCARB2-221ENST00000640341 RFWD2Q8NHY2 731 aa15.33■□□□□ 0.04
SCARB2-221ENST00000640341 GRAMD1AQ96CP6 724 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms