RNA–Protein interactions for RNA: ENST00000638889.1

CCDC7-211, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 423 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-211ENST00000638889 SERPINB13Q9UIV8 391 aa4.59□□□□□ -1.67
CCDC7-211ENST00000638889 AGAP1Q9UPQ3 857 aa4.59□□□□□ -1.67
CCDC7-211ENST00000638889 FZD9O00144 591 aa4.58□□□□□ -1.68
CCDC7-211ENST00000638889 TRIM38O00635 465 aa4.58□□□□□ -1.68
CCDC7-211ENST00000638889 ADAMTS3O15072 1205 aa4.58□□□□□ -1.68
CCDC7-211ENST00000638889 VPS4BO75351 444 aa4.58□□□□□ -1.68
CCDC7-211ENST00000638889 GNAI2P04899 355 aa4.58□□□□□ -1.68
CCDC7-211ENST00000638889 NHLRC4P0CG21 123 aaPredicted RBP4.58□□□□□ -1.68
CCDC7-211ENST00000638889 CHRM3P20309 590 aa4.58□□□□□ -1.68
CCDC7-211ENST00000638889 CCT4P50991 539 aaKnown RBP4.58□□□□□ -1.68
CCDC7-211ENST00000638889 SUPT20HL1Q3ZLR7 823 aa4.58□□□□□ -1.68
CCDC7-211ENST00000638889 EFCAB2Q5VUJ9 269 aa4.58□□□□□ -1.68
CCDC7-211ENST00000638889 CATSPERGQ6ZRH7 1159 aa4.58□□□□□ -1.68
CCDC7-211ENST00000638889 USP37Q86T82 979 aa4.58□□□□□ -1.68
CCDC7-211ENST00000638889 MRPS18AQ9NVS2 196 aaKnown RBP4.58□□□□□ -1.68
CCDC7-211ENST00000638889 TUBA8Q9NY65 449 aaPredicted RBP4.58□□□□□ -1.68
CCDC7-211ENST00000638889 TRHDEQ9UKU6 1024 aa4.58□□□□□ -1.68
CCDC7-211ENST00000638889 ATP8A1Q9Y2Q0 1164 aa4.58□□□□□ -1.68
CCDC7-211ENST00000638889 CYP2D7A0A087X1C5 515 aa4.57□□□□□ -1.68
CCDC7-211ENST00000638889 SMIM22K7EJ46 135 aa4.57□□□□□ -1.68
CCDC7-211ENST00000638889 GABRDO14764 452 aa4.57□□□□□ -1.68
CCDC7-211ENST00000638889 PPM1DO15297 605 aa4.57□□□□□ -1.68
CCDC7-211ENST00000638889 DNAJB5O75953 348 aa4.57□□□□□ -1.68
CCDC7-211ENST00000638889 TOP3BO95985 862 aaKnown RBP4.57□□□□□ -1.68
CCDC7-211ENST00000638889 CYP2C18P33260 490 aa4.57□□□□□ -1.68
CCDC7-211ENST00000638889 HOXA4Q00056 320 aaPredicted RBP4.57□□□□□ -1.68
CCDC7-211ENST00000638889 GTF2H3Q13889 308 aa4.57□□□□□ -1.68
CCDC7-211ENST00000638889 ABCB5Q2M3G0 1257 aa4.57□□□□□ -1.68
CCDC7-211ENST00000638889 PCID2Q5JVF3 399 aa4.57□□□□□ -1.68
CCDC7-211ENST00000638889 FAM160B1Q5W0V3 765 aa4.57□□□□□ -1.68
CCDC7-211ENST00000638889 GALNT16Q8N428 558 aa4.57□□□□□ -1.68
CCDC7-211ENST00000638889 C1orf43Q9BWL3 253 aa4.57□□□□□ -1.68
CCDC7-211ENST00000638889 PRSS22Q9GZN4 317 aa4.57□□□□□ -1.68
CCDC7-211ENST00000638889 SLAMF7Q9NQ25 335 aa4.57□□□□□ -1.68
CCDC7-211ENST00000638889 ANLNQ9NQW6 1124 aa4.57□□□□□ -1.68
CCDC7-211ENST00000638889 DUSP22Q9NRW4 184 aa4.57□□□□□ -1.68
CCDC7-211ENST00000638889 IL6RP08887 468 aaPredicted RBP4.56□□□□□ -1.68
CCDC7-211ENST00000638889 NR4A2P43354 598 aa4.56□□□□□ -1.68
CCDC7-211ENST00000638889 MMP13P45452 471 aa4.56□□□□□ -1.68
CCDC7-211ENST00000638889 FOXG1P55316 489 aaPredicted RBP4.56□□□□□ -1.68
CCDC7-211ENST00000638889 PCBP2Q15366 365 aaKnown RBP eCLIP4.56□□□□□ -1.68
CCDC7-211ENST00000638889 EGFLAMQ63HQ2 1017 aa4.56□□□□□ -1.68
CCDC7-211ENST00000638889 TMEM108Q6UXF1 575 aa4.56□□□□□ -1.68
CCDC7-211ENST00000638889 ZNF517Q6ZMY9 492 aaPredicted RBP4.56□□□□□ -1.68
CCDC7-211ENST00000638889 MAVSQ7Z434 540 aa4.56□□□□□ -1.68
CCDC7-211ENST00000638889 PNMA8AQ86V59 439 aaPredicted RBP4.56□□□□□ -1.68
CCDC7-211ENST00000638889 KRT73Q86Y46 540 aa4.56□□□□□ -1.68
CCDC7-211ENST00000638889 RP9Q8TA86 221 aaKnown RBP4.56□□□□□ -1.68
CCDC7-211ENST00000638889 FAM167AQ96KS9 214 aa4.56□□□□□ -1.68
CCDC7-211ENST00000638889 SH2D3AQ9BRG2 576 aa4.56□□□□□ -1.68
CCDC7-211ENST00000638889 BRIP1Q9BX63 1249 aa4.56□□□□□ -1.68
CCDC7-211ENST00000638889 SLC13A1Q9BZW2 595 aa4.56□□□□□ -1.68
CCDC7-211ENST00000638889 MRPL46Q9H2W6 279 aaKnown RBP4.56□□□□□ -1.68
CCDC7-211ENST00000638889 ELOVL5Q9NYP7 299 aa4.56□□□□□ -1.68
CCDC7-211ENST00000638889 FEZ2Q9UHY8 353 aaPredicted RBP4.56□□□□□ -1.68
CCDC7-211ENST00000638889 PCDHA3Q9Y5H8 950 aa4.56□□□□□ -1.68
CCDC7-211ENST00000638889 M0QYG6 137 aa4.55□□□□□ -1.68
CCDC7-211ENST00000638889 IGSF3O75054 1194 aa4.55□□□□□ -1.68
CCDC7-211ENST00000638889 NTN1O95631 604 aa4.55□□□□□ -1.68
CCDC7-211ENST00000638889 PDHA1P08559 390 aa4.55□□□□□ -1.68
CCDC7-211ENST00000638889 ATXN1LP0C7T5 689 aaKnown RBP4.55□□□□□ -1.68
CCDC7-211ENST00000638889 SFPQP23246 707 aaKnown RBP eCLIP4.55□□□□□ -1.68
CCDC7-211ENST00000638889 LIPAP38571 399 aa4.55□□□□□ -1.68
CCDC7-211ENST00000638889 PHKA1P46020 1223 aa4.55□□□□□ -1.68
CCDC7-211ENST00000638889 PLCD1P51178 756 aa4.55□□□□□ -1.68
CCDC7-211ENST00000638889 HK3P52790 923 aa4.55□□□□□ -1.68
CCDC7-211ENST00000638889 NOGQ13253 232 aa4.55□□□□□ -1.68
CCDC7-211ENST00000638889 MTMR1Q13613 665 aa4.55□□□□□ -1.68
CCDC7-211ENST00000638889 TRIP6Q15654 476 aaKnown RBP4.55□□□□□ -1.68
CCDC7-211ENST00000638889 TREML2Q5T2D2 321 aa4.55□□□□□ -1.68
CCDC7-211ENST00000638889 PARS2Q7L3T8 475 aaKnown RBP4.55□□□□□ -1.68
CCDC7-211ENST00000638889 MIER2Q8N344 545 aa4.55□□□□□ -1.68
CCDC7-211ENST00000638889 CPA6Q8N4T0 437 aa4.55□□□□□ -1.68
CCDC7-211ENST00000638889 C8orf58Q8NAV2 365 aa4.55□□□□□ -1.68
CCDC7-211ENST00000638889 TNPO1Q92973 898 aaKnown RBP4.55□□□□□ -1.68
CCDC7-211ENST00000638889 RGMAQ96B86 450 aa4.55□□□□□ -1.68
CCDC7-211ENST00000638889 HMCESQ96FZ2 354 aa4.55□□□□□ -1.68
CCDC7-211ENST00000638889 ASB2Q96Q27 587 aa4.55□□□□□ -1.68
CCDC7-211ENST00000638889 WACQ9BTA9 647 aa4.55□□□□□ -1.68
CCDC7-211ENST00000638889 FSD1LQ9BXM9 530 aa4.55□□□□□ -1.68
CCDC7-211ENST00000638889 VPS16Q9H269 839 aa4.55□□□□□ -1.68
CCDC7-211ENST00000638889 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.55□□□□□ -1.68
CCDC7-211ENST00000638889 SMIM35A0A1B0GVV1 85 aa4.54□□□□□ -1.68
CCDC7-211ENST00000638889 LRRC14BA6NHZ5 514 aa4.54□□□□□ -1.68
CCDC7-211ENST00000638889 H7C1Q1 480 aa4.54□□□□□ -1.68
CCDC7-211ENST00000638889 DTNBO60941 627 aa4.54□□□□□ -1.68
CCDC7-211ENST00000638889 TJP3O95049 919 aa4.54□□□□□ -1.68
CCDC7-211ENST00000638889 NPSP0C0P6 89 aa4.54□□□□□ -1.68
CCDC7-211ENST00000638889 PIM1P11309 404 aaPredicted RBP4.54□□□□□ -1.68
CCDC7-211ENST00000638889 PPIFP30405 207 aaKnown RBP4.54□□□□□ -1.68
CCDC7-211ENST00000638889 GUCY2FP51841 1108 aa4.54□□□□□ -1.68
CCDC7-211ENST00000638889 LOXL3P58215 753 aa4.54□□□□□ -1.68
CCDC7-211ENST00000638889 ITKQ08881 620 aa4.54□□□□□ -1.68
CCDC7-211ENST00000638889 FHL1Q13642 323 aa4.54□□□□□ -1.68
CCDC7-211ENST00000638889 BOP1Q14137 746 aaKnown RBP4.54□□□□□ -1.68
CCDC7-211ENST00000638889 DAZAP2Q15038 168 aaPredicted RBP4.54□□□□□ -1.68
CCDC7-211ENST00000638889 TBC1D25Q3MII6 688 aa4.54□□□□□ -1.68
CCDC7-211ENST00000638889 PXDC1Q5TGL8 231 aa4.54□□□□□ -1.68
CCDC7-211ENST00000638889 AWAT2Q6E213 333 aa4.54□□□□□ -1.68
CCDC7-211ENST00000638889 SLC2A7Q6PXP3 512 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms