RNA–Protein interactions for RNA: ENST00000638725.1

SNIP1-204, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 2

Gene SNIP1, Length 2,761 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-204ENST00000638725 SYT15Q9BQS2 421 aa11.48□□□□□ -0.57
SNIP1-204ENST00000638725 PDCD2LQ9BRP1 358 aa11.48□□□□□ -0.57
SNIP1-204ENST00000638725 ZNF341Q9BYN7 854 aa11.48□□□□□ -0.57
SNIP1-204ENST00000638725 NMRK1Q9NWW6 199 aa11.48□□□□□ -0.57
SNIP1-204ENST00000638725 HEY2Q9UBP5 337 aa11.48□□□□□ -0.57
SNIP1-204ENST00000638725 FARP1Q9Y4F1 1045 aaPredicted RBP11.48□□□□□ -0.57
SNIP1-204ENST00000638725 LTBP4Q8N2S1 1624 aa11.48□□□□□ -0.57
SNIP1-204ENST00000638725 MAP3K13O43283 966 aa11.48□□□□□ -0.57
SNIP1-204ENST00000638725 ZBED4O75132 1171 aa11.48□□□□□ -0.57
SNIP1-204ENST00000638725 ACADSP16219 412 aa11.48□□□□□ -0.57
SNIP1-204ENST00000638725 MMP8P22894 467 aa11.48□□□□□ -0.57
SNIP1-204ENST00000638725 CDKN2BP42772 138 aa11.48□□□□□ -0.57
SNIP1-204ENST00000638725 TFDP3Q5H9I0 405 aa11.48□□□□□ -0.57
SNIP1-204ENST00000638725 ADGRD1Q6QNK2 874 aa11.48□□□□□ -0.57
SNIP1-204ENST00000638725 C3orf62Q6ZUJ4 267 aa11.48□□□□□ -0.57
SNIP1-204ENST00000638725 ZNF398Q8TD17 642 aa11.48□□□□□ -0.57
SNIP1-204ENST00000638725 SH3TC2Q8TF17 1288 aa11.48□□□□□ -0.57
SNIP1-204ENST00000638725 ZNF606Q8WXB4 792 aa11.48□□□□□ -0.57
SNIP1-204ENST00000638725 CPT1BQ92523 772 aa11.48□□□□□ -0.57
SNIP1-204ENST00000638725 NKD2Q969F2 451 aaPredicted RBP11.48□□□□□ -0.57
SNIP1-204ENST00000638725 HAPLN2Q9GZV7 340 aa11.48□□□□□ -0.57
SNIP1-204ENST00000638725 POLR3FQ9H1D9 316 aaPredicted RBP11.48□□□□□ -0.57
SNIP1-204ENST00000638725 PPCSQ9HAB8 311 aa11.48□□□□□ -0.57
SNIP1-204ENST00000638725 C17orf75Q9HAS0 396 aa11.48□□□□□ -0.57
SNIP1-204ENST00000638725 SSU72Q9NP77 194 aaKnown RBP11.48□□□□□ -0.57
SNIP1-204ENST00000638725 FBXO6Q9NRD1 293 aaPredicted RBP11.48□□□□□ -0.57
SNIP1-204ENST00000638725 SPATS2LQ9NUQ6 558 aaKnown RBP11.48□□□□□ -0.57
SNIP1-204ENST00000638725 ARHGAP28Q9P2N2 729 aa11.48□□□□□ -0.57
SNIP1-204ENST00000638725 AGO2Q9UKV8 859 aaKnown RBP11.48□□□□□ -0.57
SNIP1-204ENST00000638725 PCDHA10Q9Y5I2 948 aa11.48□□□□□ -0.57
SNIP1-204ENST00000638725 KRT36O76013 467 aa11.47□□□□□ -0.57
SNIP1-204ENST00000638725 STBD1O95210 358 aa11.47□□□□□ -0.57
SNIP1-204ENST00000638725 ITGAVP06756 1048 aa11.47□□□□□ -0.57
SNIP1-204ENST00000638725 MRPS35P82673 323 aaKnown RBP11.47□□□□□ -0.57
SNIP1-204ENST00000638725 RCN1Q15293 331 aa11.47□□□□□ -0.57
SNIP1-204ENST00000638725 CCDC6Q16204 474 aa11.47□□□□□ -0.57
SNIP1-204ENST00000638725 CMPK2Q5EBM0 449 aa11.47□□□□□ -0.57
SNIP1-204ENST00000638725 DNAJC24Q6P3W2 148 aa11.47□□□□□ -0.57
SNIP1-204ENST00000638725 DCUN1D2Q6PH85 259 aa11.47□□□□□ -0.57
SNIP1-204ENST00000638725 ATP11CQ8NB49 1132 aa11.47□□□□□ -0.57
SNIP1-204ENST00000638725 FBXO36Q8NEA4 188 aa11.47□□□□□ -0.57
SNIP1-204ENST00000638725 SLC35B2Q8TB61 432 aa11.47□□□□□ -0.57
SNIP1-204ENST00000638725 ZNF333Q96JL9 665 aa11.47□□□□□ -0.57
SNIP1-204ENST00000638725 MANSC1Q9H8J5 431 aa11.47□□□□□ -0.57
SNIP1-204ENST00000638725 SEPT9Q9UHD8 586 aaPredicted RBP11.47□□□□□ -0.57
SNIP1-204ENST00000638725 RPL26L1Q9UNX3 145 aaKnown RBP11.47□□□□□ -0.57
SNIP1-204ENST00000638725 TCRBV7S3A2A0A539 114 aa11.47□□□□□ -0.57
SNIP1-204ENST00000638725 C2orf71A6NGG8 1288 aa11.47□□□□□ -0.57
SNIP1-204ENST00000638725 NVLO15381 856 aaKnown RBP11.47□□□□□ -0.57
SNIP1-204ENST00000638725 CCDC22O60826 627 aa11.47□□□□□ -0.57
SNIP1-204ENST00000638725 SERPINB3P29508 390 aa11.47□□□□□ -0.57
SNIP1-204ENST00000638725 PHBP35232 272 aa11.47□□□□□ -0.57
SNIP1-204ENST00000638725 ARL4CP56559 192 aa11.47□□□□□ -0.57
SNIP1-204ENST00000638725 GHRHRQ02643 423 aa11.47□□□□□ -0.57
SNIP1-204ENST00000638725 ENPEPQ07075 957 aa11.47□□□□□ -0.57
SNIP1-204ENST00000638725 KPNB1Q14974 876 aaKnown RBP11.47□□□□□ -0.57
SNIP1-204ENST00000638725 ACSBG2Q5FVE4 666 aa11.47□□□□□ -0.57
SNIP1-204ENST00000638725 BANPQ8N9N5 519 aa11.47□□□□□ -0.57
SNIP1-204ENST00000638725 SPDYE1Q8NFV5 336 aaPredicted RBP11.47□□□□□ -0.57
SNIP1-204ENST00000638725 OR5B17Q8NGF7 314 aa11.47□□□□□ -0.57
SNIP1-204ENST00000638725 DCAKDQ8WVC6 231 aa11.47□□□□□ -0.57
SNIP1-204ENST00000638725 PTCD3Q96EY7 689 aaKnown RBP11.47□□□□□ -0.57
SNIP1-204ENST00000638725 BTBD10Q9BSF8 475 aa11.47□□□□□ -0.57
SNIP1-204ENST00000638725 TSSK1BQ9BXA7 367 aa11.47□□□□□ -0.57
SNIP1-204ENST00000638725 TRIM55Q9BYV6 548 aa11.47□□□□□ -0.57
SNIP1-204ENST00000638725 ACSS3Q9H6R3 686 aa11.47□□□□□ -0.57
SNIP1-204ENST00000638725 PXMP2Q9NR77 195 aa11.47□□□□□ -0.57
SNIP1-204ENST00000638725 RBAKQ9NYW8 714 aaPredicted RBP11.47□□□□□ -0.57
SNIP1-204ENST00000638725 TCRBV5S1A1TA0A578 114 aa11.46□□□□□ -0.57
SNIP1-204ENST00000638725 GSC2O15499 205 aa11.46□□□□□ -0.57
SNIP1-204ENST00000638725 LMNAP02545 664 aaKnown RBP11.46□□□□□ -0.57
SNIP1-204ENST00000638725 OTUD4Q01804 1114 aaKnown RBP11.46□□□□□ -0.57
SNIP1-204ENST00000638725 KLC1Q07866 573 aa11.46□□□□□ -0.57
SNIP1-204ENST00000638725 SMTNL2Q2TAL5 461 aa11.46□□□□□ -0.57
SNIP1-204ENST00000638725 BBS9Q3SYG4 887 aa11.46□□□□□ -0.57
SNIP1-204ENST00000638725 SEZ6Q53EL9 994 aa11.46□□□□□ -0.57
SNIP1-204ENST00000638725 ZNF394Q53GI3 561 aa11.46□□□□□ -0.57
SNIP1-204ENST00000638725 THEMIS2Q5TEJ8 643 aa11.46□□□□□ -0.57
SNIP1-204ENST00000638725 LRRC38Q5VT99 294 aa11.46□□□□□ -0.57
SNIP1-204ENST00000638725 ARHGEF16Q5VV41 709 aa11.46□□□□□ -0.57
SNIP1-204ENST00000638725 SWSAP1Q6NVH7 229 aa11.46□□□□□ -0.57
SNIP1-204ENST00000638725 TMEM154Q6P9G4 183 aa11.46□□□□□ -0.57
SNIP1-204ENST00000638725 PPIL6Q8IXY8 311 aa11.46□□□□□ -0.57
SNIP1-204ENST00000638725 ACTL9Q8TC94 416 aa11.46□□□□□ -0.57
SNIP1-204ENST00000638725 UCMAQ8WVF2 138 aa11.46□□□□□ -0.57
SNIP1-204ENST00000638725 NRG4Q8WWG1 115 aa11.46□□□□□ -0.57
SNIP1-204ENST00000638725 ZBTB10Q96DT7 871 aa11.46□□□□□ -0.57
SNIP1-204ENST00000638725 DHRS4Q9BTZ2 278 aa11.46□□□□□ -0.57
SNIP1-204ENST00000638725 PDLIM7Q9NR12 457 aa11.46□□□□□ -0.57
SNIP1-204ENST00000638725 METTL5Q9NRN9 209 aaKnown RBP11.46□□□□□ -0.57
SNIP1-204ENST00000638725 GINM1Q9NU53 330 aa11.46□□□□□ -0.57
SNIP1-204ENST00000638725 STOML1Q9UBI4 398 aa11.46□□□□□ -0.57
SNIP1-204ENST00000638725 ZNRF3Q9ULT6 936 aa11.46□□□□□ -0.57
SNIP1-204ENST00000638725 SNCAIPQ9Y6H5 919 aa11.46□□□□□ -0.57
SNIP1-204ENST00000638725 MYH9P35579 1960 aaKnown RBP11.46□□□□□ -0.57
SNIP1-204ENST00000638725 TM9SF1O15321 606 aa11.46□□□□□ -0.58
SNIP1-204ENST00000638725 HNRNPCL1O60812 293 aaKnown RBP11.46□□□□□ -0.58
SNIP1-204ENST00000638725 DGAT1O75907 488 aa11.46□□□□□ -0.58
SNIP1-204ENST00000638725 TMEM63AO94886 807 aa11.46□□□□□ -0.58
SNIP1-204ENST00000638725 BRD2P25440 801 aaKnown RBP11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 128.7 ms