RNA–Protein interactions for RNA: ENST00000638076.1

CLN6-224, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 2,323 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-224ENST00000638076 LIASO43766 372 aa22.7■■□□□ 1.22
CLN6-224ENST00000638076 P4HA1P13674 534 aa22.7■■□□□ 1.22
CLN6-224ENST00000638076 PSMA2P25787 234 aa22.7■■□□□ 1.22
CLN6-224ENST00000638076 COPS2P61201 443 aa22.7■■□□□ 1.22
CLN6-224ENST00000638076 ACVR2BQ13705 512 aa22.7■■□□□ 1.22
CLN6-224ENST00000638076 TINF2Q9BSI4 451 aa22.7■■□□□ 1.22
CLN6-224ENST00000638076 TMEM109Q9BVC6 243 aa22.7■■□□□ 1.22
CLN6-224ENST00000638076 SYNCQ9H7C4 482 aa22.7■■□□□ 1.22
CLN6-224ENST00000638076 CYP3A43Q9HB55 503 aa22.7■■□□□ 1.22
CLN6-224ENST00000638076 DNAJC17Q9NVM6 304 aaKnown RBP22.7■■□□□ 1.22
CLN6-224ENST00000638076 DDX56Q9NY93 547 aaKnown RBP22.7■■□□□ 1.22
CLN6-224ENST00000638076 PCNTO95613 3336 aa22.7■■□□□ 1.22
CLN6-224ENST00000638076 ACSL3O95573 720 aa22.7■■□□□ 1.22
CLN6-224ENST00000638076 SLCO1A2P46721 670 aa22.7■■□□□ 1.22
CLN6-224ENST00000638076 DGKDQ16760 1214 aa22.7■■□□□ 1.22
CLN6-224ENST00000638076 CROCCP2Q86T23 111 aa22.7■■□□□ 1.22
CLN6-224ENST00000638076 PRUNE1Q86TP1 453 aa22.7■■□□□ 1.22
CLN6-224ENST00000638076 ABHD16BQ9H3Z7 469 aa22.7■■□□□ 1.22
CLN6-224ENST00000638076 DNPEPQ9ULA0 475 aa22.7■■□□□ 1.22
CLN6-224ENST00000638076 LRRD1A4D1F6 860 aa22.69■■□□□ 1.22
CLN6-224ENST00000638076 E7EVH7 732 aa22.69■■□□□ 1.22
CLN6-224ENST00000638076 MICAL2O94851 1124 aa22.69■■□□□ 1.22
CLN6-224ENST00000638076 ITGBL1O95965 494 aaPredicted RBP22.69■■□□□ 1.22
CLN6-224ENST00000638076 ERBB2P04626 1255 aa22.69■■□□□ 1.22
CLN6-224ENST00000638076 NLRP14Q86W24 1093 aa22.69■■□□□ 1.22
CLN6-224ENST00000638076 XYLT1Q86Y38 959 aa22.69■■□□□ 1.22
CLN6-224ENST00000638076 TSPYL1Q9H0U9 437 aa22.69■■□□□ 1.22
CLN6-224ENST00000638076 DPP3Q9NY33 737 aa22.69■■□□□ 1.22
CLN6-224ENST00000638076 C2CD2Q9Y426 696 aa22.69■■□□□ 1.22
CLN6-224ENST00000638076 hCG_1818297A0A087WSY0 165 aa22.69■■□□□ 1.22
CLN6-224ENST00000638076 RASGRF2O14827 1237 aa22.69■■□□□ 1.22
CLN6-224ENST00000638076 ADCY6O43306 1168 aa22.69■■□□□ 1.22
CLN6-224ENST00000638076 HOXD8P13378 290 aaPredicted RBP22.69■■□□□ 1.22
CLN6-224ENST00000638076 KLRC2P26717 231 aa22.69■■□□□ 1.22
CLN6-224ENST00000638076 LMNB2Q03252 620 aa22.69■■□□□ 1.22
CLN6-224ENST00000638076 TFDP3Q5H9I0 405 aa22.69■■□□□ 1.22
CLN6-224ENST00000638076 PLEKHH3Q7Z736 793 aa22.69■■□□□ 1.22
CLN6-224ENST00000638076 HEXIM2Q96MH2 286 aaKnown RBP22.69■■□□□ 1.22
CLN6-224ENST00000638076 SETD4Q9NVD3 440 aa22.69■■□□□ 1.22
CLN6-224ENST00000638076 ITGA11Q9UKX5 1188 aa22.69■■□□□ 1.22
CLN6-224ENST00000638076 WDR3Q9UNX4 943 aaKnown RBP eCLIP22.69■■□□□ 1.22
CLN6-224ENST00000638076 SRRM3A6NNA2 597 aaPredicted RBP22.68■■□□□ 1.22
CLN6-224ENST00000638076 M0QYV0 167 aa22.68■■□□□ 1.22
CLN6-224ENST00000638076 CDKN2BP42772 138 aa22.68■■□□□ 1.22
CLN6-224ENST00000638076 IFI35P80217 286 aaPredicted RBP22.68■■□□□ 1.22
CLN6-224ENST00000638076 KIZQ2M2Z5 673 aa22.68■■□□□ 1.22
CLN6-224ENST00000638076 ZNF410Q86VK4 478 aa22.68■■□□□ 1.22
CLN6-224ENST00000638076 BBOF1Q8ND07 529 aa22.68■■□□□ 1.22
CLN6-224ENST00000638076 NPLOC4Q8TAT6 608 aa22.68■■□□□ 1.22
CLN6-224ENST00000638076 MYCBPAPQ8TBZ2 947 aa22.68■■□□□ 1.22
CLN6-224ENST00000638076 PWWP2AQ96N64 755 aa22.68■■□□□ 1.22
CLN6-224ENST00000638076 CCT8L2Q96SF2 557 aa22.68■■□□□ 1.22
CLN6-224ENST00000638076 CNOT10Q9H9A5 744 aaKnown RBP22.68■■□□□ 1.22
CLN6-224ENST00000638076 METTL5Q9NRN9 209 aaKnown RBP22.68■■□□□ 1.22
CLN6-224ENST00000638076 MYO1CO00159 1063 aa22.68■■□□□ 1.22
CLN6-224ENST00000638076 PTPN7P35236 360 aa22.68■■□□□ 1.22
CLN6-224ENST00000638076 RBP5P82980 135 aa22.68■■□□□ 1.22
CLN6-224ENST00000638076 IZUMO3Q5VZ72 239 aa22.68■■□□□ 1.22
CLN6-224ENST00000638076 DPH6Q7L8W6 267 aa22.68■■□□□ 1.22
CLN6-224ENST00000638076 POLNQ7Z5Q5 900 aa22.68■■□□□ 1.22
CLN6-224ENST00000638076 ARFGAP1Q8N6T3 406 aa22.68■■□□□ 1.22
CLN6-224ENST00000638076 EMC1Q8N766 993 aa22.68■■□□□ 1.22
CLN6-224ENST00000638076 FNIP1Q8TF40 1166 aa22.68■■□□□ 1.22
CLN6-224ENST00000638076 KIF12Q96FN5 646 aa22.68■■□□□ 1.22
CLN6-224ENST00000638076 PARK7Q99497 189 aaKnown RBP22.68■■□□□ 1.22
CLN6-224ENST00000638076 PTPN18Q99952 460 aa22.68■■□□□ 1.22
CLN6-224ENST00000638076 ZWILCHQ9H900 591 aa22.68■■□□□ 1.22
CLN6-224ENST00000638076 WDR35Q9P2L0 1181 aa22.68■■□□□ 1.22
CLN6-224ENST00000638076 ZNF148Q9UQR1 794 aa22.68■■□□□ 1.22
CLN6-224ENST00000638076 GINS2Q9Y248 185 aa22.68■■□□□ 1.22
CLN6-224ENST00000638076 LRCH4O75427 683 aa22.67■■□□□ 1.22
CLN6-224ENST00000638076 AGTP01019 485 aa22.67■■□□□ 1.22
CLN6-224ENST00000638076 VDRP11473 427 aa22.67■■□□□ 1.22
CLN6-224ENST00000638076 GSCP56915 257 aaPredicted RBP22.67■■□□□ 1.22
CLN6-224ENST00000638076 SLC25A11Q02978 314 aaKnown RBP22.67■■□□□ 1.22
CLN6-224ENST00000638076 TMEM62Q0P6H9 643 aa22.67■■□□□ 1.22
CLN6-224ENST00000638076 GPR162Q16538 588 aa22.67■■□□□ 1.22
CLN6-224ENST00000638076 FAM110CQ1W6H9 321 aa22.67■■□□□ 1.22
CLN6-224ENST00000638076 SMTNL2Q2TAL5 461 aa22.67■■□□□ 1.22
CLN6-224ENST00000638076 IQSEC1Q6DN90 963 aa22.67■■□□□ 1.22
CLN6-224ENST00000638076 DRICH1Q6PGQ1 229 aaPredicted RBP22.67■■□□□ 1.22
CLN6-224ENST00000638076 MDM1Q8TC05 714 aa22.67■■□□□ 1.22
CLN6-224ENST00000638076 ZNF473Q8WTR7 871 aaKnown RBP22.67■■□□□ 1.22
CLN6-224ENST00000638076 HAUS1Q96CS2 278 aa22.67■■□□□ 1.22
CLN6-224ENST00000638076 GBA2Q9HCG7 927 aaPredicted RBP22.67■■□□□ 1.22
CLN6-224ENST00000638076 BARX2Q9UMQ3 279 aaPredicted RBP22.67■■□□□ 1.22
CLN6-224ENST00000638076 ANKRD65E5RJM6 399 aa22.66■■□□□ 1.22
CLN6-224ENST00000638076 GPD2P43304 727 aa22.66■■□□□ 1.22
CLN6-224ENST00000638076 ZNF268Q14587 947 aaPredicted RBP22.66■■□□□ 1.22
CLN6-224ENST00000638076 P3H1Q32P28 736 aa22.66■■□□□ 1.22
CLN6-224ENST00000638076 GLIS1Q8NBF1 620 aa22.66■■□□□ 1.22
CLN6-224ENST00000638076 ROPN1BQ9BZX4 212 aaPredicted RBP22.66■■□□□ 1.22
CLN6-224ENST00000638076 ROPN1Q9HAT0 212 aaPredicted RBP22.66■■□□□ 1.22
CLN6-224ENST00000638076 TRAPPC3O43617 180 aa22.66■■□□□ 1.22
CLN6-224ENST00000638076 TTC4O95801 387 aa22.66■■□□□ 1.22
CLN6-224ENST00000638076 IL1R2P27930 398 aa22.66■■□□□ 1.22
CLN6-224ENST00000638076 GRM5P41594 1212 aa22.66■■□□□ 1.22
CLN6-224ENST00000638076 CDR1P51861 262 aa22.66■■□□□ 1.22
CLN6-224ENST00000638076 NDST1P52848 882 aa22.66■■□□□ 1.22
CLN6-224ENST00000638076 AUHQ13825 339 aaKnown RBP22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms