RNA–Protein interactions for RNA: ENST00000637809.1

CACNA1A-250, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 871 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-250ENST00000637809 USP49Q70CQ1 688 aa13.08□□□□□ -0.32
CACNA1A-250ENST00000637809 SFR1Q86XK3 245 aa13.08□□□□□ -0.32
CACNA1A-250ENST00000637809 DCP1BQ8IZD4 617 aaKnown RBP13.08□□□□□ -0.32
CACNA1A-250ENST00000637809 PDCL2Q8N4E4 241 aa13.08□□□□□ -0.32
CACNA1A-250ENST00000637809 CXorf38Q8TB03 319 aa13.08□□□□□ -0.32
CACNA1A-250ENST00000637809 LOXL4Q96JB6 756 aa13.08□□□□□ -0.32
CACNA1A-250ENST00000637809 PKMYT1Q99640 499 aa13.08□□□□□ -0.32
CACNA1A-250ENST00000637809 RXFP3Q9NSD7 469 aa13.08□□□□□ -0.32
CACNA1A-250ENST00000637809 TDP1Q9NUW8 608 aa13.08□□□□□ -0.32
CACNA1A-250ENST00000637809 PCDHB5Q9Y5E4 795 aa13.08□□□□□ -0.32
CACNA1A-250ENST00000637809 USP24Q9UPU5 2620 aa13.08□□□□□ -0.32
CACNA1A-250ENST00000637809 SOBPA7XYQ1 873 aa13.07□□□□□ -0.32
CACNA1A-250ENST00000637809 TM4SF5O14894 197 aa13.07□□□□□ -0.32
CACNA1A-250ENST00000637809 AXIN1O15169 862 aa13.07□□□□□ -0.32
CACNA1A-250ENST00000637809 RPP40O75818 363 aaKnown RBP13.07□□□□□ -0.32
CACNA1A-250ENST00000637809 EPN2O95208 641 aa13.07□□□□□ -0.32
CACNA1A-250ENST00000637809 IL18RAPO95256 599 aa13.07□□□□□ -0.32
CACNA1A-250ENST00000637809 BMP15O95972 392 aa13.07□□□□□ -0.32
CACNA1A-250ENST00000637809 EGFP01133 1207 aa13.07□□□□□ -0.32
CACNA1A-250ENST00000637809 ZNF268Q14587 947 aaPredicted RBP13.07□□□□□ -0.32
CACNA1A-250ENST00000637809 PTPAQ15257 358 aa13.07□□□□□ -0.32
CACNA1A-250ENST00000637809 SF3A1Q15459 793 aaKnown RBP13.07□□□□□ -0.32
CACNA1A-250ENST00000637809 CCDC6Q16204 474 aa13.07□□□□□ -0.32
CACNA1A-250ENST00000637809 TAF12Q16514 161 aa13.07□□□□□ -0.32
CACNA1A-250ENST00000637809 SDHAF4Q5VUM1 108 aa13.07□□□□□ -0.32
CACNA1A-250ENST00000637809 CACNA2D4Q7Z3S7 1137 aa13.07□□□□□ -0.32
CACNA1A-250ENST00000637809 KBTBD6Q86V97 674 aa13.07□□□□□ -0.32
CACNA1A-250ENST00000637809 MON1AQ86VX9 555 aa13.07□□□□□ -0.32
CACNA1A-250ENST00000637809 NT5DC4Q86YG4 428 aa13.07□□□□□ -0.32
CACNA1A-250ENST00000637809 C1orf127Q8N9H9 656 aa13.07□□□□□ -0.32
CACNA1A-250ENST00000637809 ZSWIM2Q8NEG5 633 aa13.07□□□□□ -0.32
CACNA1A-250ENST00000637809 LEO1Q8WVC0 666 aaPredicted RBP13.07□□□□□ -0.32
CACNA1A-250ENST00000637809 POMGNT1Q8WZA1 660 aa13.07□□□□□ -0.32
CACNA1A-250ENST00000637809 HVCN1Q96D96 273 aa13.07□□□□□ -0.32
CACNA1A-250ENST00000637809 EPSTI1Q96J88 318 aa13.07□□□□□ -0.32
CACNA1A-250ENST00000637809 PI4K2AQ9BTU6 479 aa13.07□□□□□ -0.32
CACNA1A-250ENST00000637809 ARRDC1-AS1Q9H2J1 176 aa13.07□□□□□ -0.32
CACNA1A-250ENST00000637809 KIF9Q9HAQ2 790 aa13.07□□□□□ -0.32
CACNA1A-250ENST00000637809 L1RE1Q9UN81 338 aa13.07□□□□□ -0.32
CACNA1A-250ENST00000637809 ASPMQ8IZT6 3477 aa13.07□□□□□ -0.32
CACNA1A-250ENST00000637809 ATG13O75143 517 aa13.06□□□□□ -0.32
CACNA1A-250ENST00000637809 RNF40O75150 1001 aa13.06□□□□□ -0.32
CACNA1A-250ENST00000637809 PRPF40AO75400 957 aaKnown RBP13.06□□□□□ -0.32
CACNA1A-250ENST00000637809 NOL4O94818 638 aa13.06□□□□□ -0.32
CACNA1A-250ENST00000637809 ZNF806P0C7X5 589 aa13.06□□□□□ -0.32
CACNA1A-250ENST00000637809 CSH1P0DML2 217 aa13.06□□□□□ -0.32
CACNA1A-250ENST00000637809 CSH2P0DML3 217 aa13.06□□□□□ -0.32
CACNA1A-250ENST00000637809 POLR2BP30876 1174 aaKnown RBP13.06□□□□□ -0.32
CACNA1A-250ENST00000637809 PNPLA4P41247 253 aa13.06□□□□□ -0.32
CACNA1A-250ENST00000637809 GALK1P51570 392 aa13.06□□□□□ -0.32
CACNA1A-250ENST00000637809 BFSP1Q12934 665 aa13.06□□□□□ -0.32
CACNA1A-250ENST00000637809 NFE2Q16621 373 aaPredicted RBP13.06□□□□□ -0.32
CACNA1A-250ENST00000637809 DDR2Q16832 855 aa13.06□□□□□ -0.32
CACNA1A-250ENST00000637809 CCDC142Q17RM4 750 aa13.06□□□□□ -0.32
CACNA1A-250ENST00000637809 PLA2G2CQ5R387 149 aa13.06□□□□□ -0.32
CACNA1A-250ENST00000637809 DYMQ7RTS9 669 aa13.06□□□□□ -0.32
CACNA1A-250ENST00000637809 KRI1Q8N9T8 703 aaKnown RBP13.06□□□□□ -0.32
CACNA1A-250ENST00000637809 RASSF8Q8NHQ8 419 aa13.06□□□□□ -0.32
CACNA1A-250ENST00000637809 MRPS31Q92665 395 aaKnown RBP13.06□□□□□ -0.32
CACNA1A-250ENST00000637809 EZH1Q92800 747 aaPredicted RBP13.06□□□□□ -0.32
CACNA1A-250ENST00000637809 DNAJC19Q96DA6 116 aa13.06□□□□□ -0.32
CACNA1A-250ENST00000637809 ZC3H10Q96K80 434 aaKnown RBP13.06□□□□□ -0.32
CACNA1A-250ENST00000637809 FAM84AQ96KN4 292 aa13.06□□□□□ -0.32
CACNA1A-250ENST00000637809 MYRFLQ96LU7 910 aa13.06□□□□□ -0.32
CACNA1A-250ENST00000637809 ZNF560Q96MR9 790 aa13.06□□□□□ -0.32
CACNA1A-250ENST00000637809 SLC22A12Q96S37 553 aa13.06□□□□□ -0.32
CACNA1A-250ENST00000637809 ACBD6Q9BR61 282 aa13.06□□□□□ -0.32
CACNA1A-250ENST00000637809 FAM213AQ9BRX8 229 aa13.06□□□□□ -0.32
CACNA1A-250ENST00000637809 ABCB6Q9NP58 842 aa13.06□□□□□ -0.32
CACNA1A-250ENST00000637809 NUP210Q8TEM1 1887 aaPredicted RBP13.06□□□□□ -0.32
CACNA1A-250ENST00000637809 CEP295Q9C0D2 2601 aa13.06□□□□□ -0.32
CACNA1A-250ENST00000637809 MAP1BP46821 2468 aaKnown RBP13.05□□□□□ -0.32
CACNA1A-250ENST00000637809 MYMKA6NI61 221 aa13.05□□□□□ -0.32
CACNA1A-250ENST00000637809 AKAP3O75969 853 aa13.05□□□□□ -0.32
CACNA1A-250ENST00000637809 ITGB3P05106 788 aa13.05□□□□□ -0.32
CACNA1A-250ENST00000637809 DRD1P21728 446 aa13.05□□□□□ -0.32
CACNA1A-250ENST00000637809 ACAT1P24752 427 aaKnown RBP13.05□□□□□ -0.32
CACNA1A-250ENST00000637809 CYP2F1P24903 491 aa13.05□□□□□ -0.32
CACNA1A-250ENST00000637809 GJA4P35212 333 aa13.05□□□□□ -0.32
CACNA1A-250ENST00000637809 CASP5P51878 434 aa13.05□□□□□ -0.32
CACNA1A-250ENST00000637809 TFAMQ00059 246 aaKnown RBP13.05□□□□□ -0.32
CACNA1A-250ENST00000637809 TSPY1Q01534 308 aa13.05□□□□□ -0.32
CACNA1A-250ENST00000637809 MTF1Q14872 753 aa13.05□□□□□ -0.32
CACNA1A-250ENST00000637809 POSTNQ15063 836 aa13.05□□□□□ -0.32
CACNA1A-250ENST00000637809 PDGFRLQ15198 375 aa13.05□□□□□ -0.32
CACNA1A-250ENST00000637809 ZNF77Q15935 545 aa13.05□□□□□ -0.32
CACNA1A-250ENST00000637809 AASDHQ4L235 1098 aaPredicted RBP13.05□□□□□ -0.32
CACNA1A-250ENST00000637809 INTS6LQ5JSJ4 861 aaKnown RBP13.05□□□□□ -0.32
CACNA1A-250ENST00000637809 L1TD1Q5T7N2 865 aaKnown RBP13.05□□□□□ -0.32
CACNA1A-250ENST00000637809 LARP1BQ659C4 914 aaKnown RBP13.05□□□□□ -0.32
CACNA1A-250ENST00000637809 BRAPQ7Z569 592 aa13.05□□□□□ -0.32
CACNA1A-250ENST00000637809 OSTM1Q86WC4 334 aa13.05□□□□□ -0.32
CACNA1A-250ENST00000637809 BRSK2Q8IWQ3 736 aa13.05□□□□□ -0.32
CACNA1A-250ENST00000637809 CAMKK1Q8N5S9 505 aa13.05□□□□□ -0.32
CACNA1A-250ENST00000637809 LRRC52Q8N7C0 313 aa13.05□□□□□ -0.32
CACNA1A-250ENST00000637809 DDX1Q92499 740 aaKnown RBP13.05□□□□□ -0.32
CACNA1A-250ENST00000637809 SAAL1Q96ER3 474 aa13.05□□□□□ -0.32
CACNA1A-250ENST00000637809 TRMT2BQ96GJ1 504 aaKnown RBP13.05□□□□□ -0.32
CACNA1A-250ENST00000637809 DDX43Q9NXZ2 648 aaKnown RBP13.05□□□□□ -0.32
CACNA1A-250ENST00000637809 SEL1LQ9UBV2 794 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms