RNA–Protein interactions for RNA: ENST00000637519.1

CHRNA7-228, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 2,084 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-228ENST00000637519 SLC1A1P43005 524 aa22.91■■□□□ 1.26
CHRNA7-228ENST00000637519 PLA2G4AP47712 749 aa22.91■■□□□ 1.26
CHRNA7-228ENST00000637519 PSMC1P62191 440 aaKnown RBP22.91■■□□□ 1.26
CHRNA7-228ENST00000637519 ZNF784Q8NCA9 323 aaPredicted RBP22.91■■□□□ 1.26
CHRNA7-228ENST00000637519 RNF169Q8NCN4 708 aa22.91■■□□□ 1.26
CHRNA7-228ENST00000637519 DDX27Q96GQ7 796 aaKnown RBP22.91■■□□□ 1.26
CHRNA7-228ENST00000637519 PPP1R10Q96QC0 940 aaKnown RBP22.91■■□□□ 1.26
CHRNA7-228ENST00000637519 GDF3Q9NR23 364 aa22.91■■□□□ 1.26
CHRNA7-228ENST00000637519 PFKMP08237 780 aa22.91■■□□□ 1.26
CHRNA7-228ENST00000637519 LMO2P25791 158 aa22.91■■□□□ 1.26
CHRNA7-228ENST00000637519 LPIN1Q14693 890 aa22.91■■□□□ 1.26
CHRNA7-228ENST00000637519 CASP8Q14790 479 aa22.91■■□□□ 1.26
CHRNA7-228ENST00000637519 CCDC142Q17RM4 750 aa22.91■■□□□ 1.26
CHRNA7-228ENST00000637519 RPAINQ86UA6 219 aa22.91■■□□□ 1.26
CHRNA7-228ENST00000637519 XYLT1Q86Y38 959 aa22.91■■□□□ 1.26
CHRNA7-228ENST00000637519 EMC1Q8N766 993 aa22.91■■□□□ 1.26
CHRNA7-228ENST00000637519 GADD45GIP1Q8TAE8 222 aaPredicted RBP22.91■■□□□ 1.26
CHRNA7-228ENST00000637519 TRPV6Q9H1D0 765 aa22.91■■□□□ 1.26
CHRNA7-228ENST00000637519 MIOSQ9NXC5 875 aa22.91■■□□□ 1.26
CHRNA7-228ENST00000637519 FAM53CQ9NYF3 392 aa22.91■■□□□ 1.26
CHRNA7-228ENST00000637519 MYCP01106 439 aaPredicted RBP22.9■■□□□ 1.26
CHRNA7-228ENST00000637519 ATF7P17544 494 aaPredicted RBP22.9■■□□□ 1.26
CHRNA7-228ENST00000637519 RFC1P35251 1148 aaPredicted RBP22.9■■□□□ 1.26
CHRNA7-228ENST00000637519 MAP2K2P36507 400 aa22.9■■□□□ 1.26
CHRNA7-228ENST00000637519 ATP13A4Q4VNC1 1196 aa22.9■■□□□ 1.26
CHRNA7-228ENST00000637519 LHX8Q68G74 356 aa22.9■■□□□ 1.26
CHRNA7-228ENST00000637519 AGMOQ6ZNB7 445 aa22.9■■□□□ 1.26
CHRNA7-228ENST00000637519 DDX42Q86XP3 938 aaKnown RBP eCLIP22.9■■□□□ 1.26
CHRNA7-228ENST00000637519 SLC13A5Q86YT5 568 aaPredicted RBP22.9■■□□□ 1.26
CHRNA7-228ENST00000637519 PRELID2Q8N945 189 aa22.9■■□□□ 1.26
CHRNA7-228ENST00000637519 AENQ8WTP8 325 aaKnown RBP22.9■■□□□ 1.26
CHRNA7-228ENST00000637519 ACSF2Q96CM8 615 aaPredicted RBP22.9■■□□□ 1.26
CHRNA7-228ENST00000637519 C18orf8Q96DM3 657 aa22.9■■□□□ 1.26
CHRNA7-228ENST00000637519 ZNF560Q96MR9 790 aa22.9■■□□□ 1.26
CHRNA7-228ENST00000637519 TRIM51Q9BSJ1 452 aa22.9■■□□□ 1.26
CHRNA7-228ENST00000637519 METTL5Q9NRN9 209 aaKnown RBP22.9■■□□□ 1.26
CHRNA7-228ENST00000637519 NFU1Q9UMS0 254 aa22.9■■□□□ 1.26
CHRNA7-228ENST00000637519 A8MXQ7 604 aa22.89■■□□□ 1.26
CHRNA7-228ENST00000637519 MAP2K7O14733 419 aa22.89■■□□□ 1.26
CHRNA7-228ENST00000637519 GPR182O15218 404 aa22.89■■□□□ 1.26
CHRNA7-228ENST00000637519 RGS7P49802 495 aa22.89■■□□□ 1.26
CHRNA7-228ENST00000637519 TAF6P49848 677 aa22.89■■□□□ 1.26
CHRNA7-228ENST00000637519 PAK2Q13177 524 aa22.89■■□□□ 1.26
CHRNA7-228ENST00000637519 TRIM71Q2Q1W2 868 aaKnown RBP22.89■■□□□ 1.26
CHRNA7-228ENST00000637519 TXNRD3NBQ6F5E7 133 aa22.89■■□□□ 1.26
CHRNA7-228ENST00000637519 ANKS1BQ7Z6G8 1248 aa22.89■■□□□ 1.26
CHRNA7-228ENST00000637519 TTC30AQ86WT1 665 aa22.89■■□□□ 1.26
CHRNA7-228ENST00000637519 PXYLP1Q8TE99 480 aa22.89■■□□□ 1.26
CHRNA7-228ENST00000637519 PIWIL1Q96J94 861 aaKnown RBP22.89■■□□□ 1.26
CHRNA7-228ENST00000637519 NAP1L3Q99457 506 aaPredicted RBP22.89■■□□□ 1.26
CHRNA7-228ENST00000637519 OGFRQ9NZT2 677 aa22.89■■□□□ 1.26
CHRNA7-228ENST00000637519 IP6K2Q9UHH9 426 aa22.89■■□□□ 1.26
CHRNA7-228ENST00000637519 XPOTO43592 962 aaKnown RBP22.89■■□□□ 1.25
CHRNA7-228ENST00000637519 LCLAT1Q6UWP7 414 aa22.89■■□□□ 1.25
CHRNA7-228ENST00000637519 PTCH2Q9Y6C5 1203 aa22.89■■□□□ 1.25
CHRNA7-228ENST00000637519 CCDC130P13994 396 aa22.88■■□□□ 1.25
CHRNA7-228ENST00000637519 SCNN1GP51170 649 aa22.88■■□□□ 1.25
CHRNA7-228ENST00000637519 LILRA4P59901 499 aa22.88■■□□□ 1.25
CHRNA7-228ENST00000637519 PTK7Q13308 1070 aa22.88■■□□□ 1.25
CHRNA7-228ENST00000637519 SIX1Q15475 284 aaPredicted RBP22.88■■□□□ 1.25
CHRNA7-228ENST00000637519 MAP9Q49MG5 647 aa22.88■■□□□ 1.25
CHRNA7-228ENST00000637519 TTC27Q6P3X3 843 aa22.88■■□□□ 1.25
CHRNA7-228ENST00000637519 HDXQ7Z353 690 aa22.88■■□□□ 1.25
CHRNA7-228ENST00000637519 IFT20Q8IY31 132 aa22.88■■□□□ 1.25
CHRNA7-228ENST00000637519 GLT1D1Q96MS3 346 aa22.88■■□□□ 1.25
CHRNA7-228ENST00000637519 STRIP2Q9ULQ0 834 aa22.88■■□□□ 1.25
CHRNA7-228ENST00000637519 GOLGA6L10A0A0M3HER8 536 aa22.88■■□□□ 1.25
CHRNA7-228ENST00000637519 E5RJQ4 531 aa22.88■■□□□ 1.25
CHRNA7-228ENST00000637519 FAM153BP0C7A2 387 aa22.88■■□□□ 1.25
CHRNA7-228ENST00000637519 RARAP10276 462 aa22.88■■□□□ 1.25
CHRNA7-228ENST00000637519 KRT3P12035 628 aa22.88■■□□□ 1.25
CHRNA7-228ENST00000637519 FAM153CQ494X1 144 aa22.88■■□□□ 1.25
CHRNA7-228ENST00000637519 SND1Q7KZF4 910 aaKnown RBP eCLIP22.88■■□□□ 1.25
CHRNA7-228ENST00000637519 OSTM1Q86WC4 334 aa22.88■■□□□ 1.25
CHRNA7-228ENST00000637519 CCDC50Q8IVM0 306 aa22.88■■□□□ 1.25
CHRNA7-228ENST00000637519 RHOT1Q8IXI2 618 aa22.88■■□□□ 1.25
CHRNA7-228ENST00000637519 SH3TC2Q8TF17 1288 aa22.88■■□□□ 1.25
CHRNA7-228ENST00000637519 CHST12Q9NRB3 414 aa22.88■■□□□ 1.25
CHRNA7-228ENST00000637519 FAM153AQ9UHL3 310 aa22.88■■□□□ 1.25
CHRNA7-228ENST00000637519 A0A1W2PQ45 241 aaPredicted RBP22.87■■□□□ 1.25
CHRNA7-228ENST00000637519 A0A1W2PQY0 241 aa22.87■■□□□ 1.25
CHRNA7-228ENST00000637519 ARL5CA6NH57 179 aa22.87■■□□□ 1.25
CHRNA7-228ENST00000637519 FKTNO75072 461 aa22.87■■□□□ 1.25
CHRNA7-228ENST00000637519 TTC39CQ8N584 583 aa22.87■■□□□ 1.25
CHRNA7-228ENST00000637519 RUBCNQ92622 972 aa22.87■■□□□ 1.25
CHRNA7-228ENST00000637519 PAAF1Q9BRP4 392 aa22.87■■□□□ 1.25
CHRNA7-228ENST00000637519 HEMGNQ9BXL5 484 aa22.87■■□□□ 1.25
CHRNA7-228ENST00000637519 TRIM31Q9BZY9 425 aa22.87■■□□□ 1.25
CHRNA7-228ENST00000637519 SLITRK6Q9H5Y7 841 aa22.87■■□□□ 1.25
CHRNA7-228ENST00000637519 A0A0U1RQG5 324 aaPredicted RBP22.86■■□□□ 1.25
CHRNA7-228ENST00000637519 PI4K2BG5E9Z4 385 aa22.86■■□□□ 1.25
CHRNA7-228ENST00000637519 PSTPIP1O43586 416 aa22.86■■□□□ 1.25
CHRNA7-228ENST00000637519 ADORA2BP29275 332 aa22.86■■□□□ 1.25
CHRNA7-228ENST00000637519 MAN1A1P33908 653 aa22.86■■□□□ 1.25
CHRNA7-228ENST00000637519 SV2CQ496J9 727 aa22.86■■□□□ 1.25
CHRNA7-228ENST00000637519 ADGRF2Q8IZF7 708 aa22.86■■□□□ 1.25
CHRNA7-228ENST00000637519 APPL2Q8NEU8 664 aa22.86■■□□□ 1.25
CHRNA7-228ENST00000637519 HMX1Q9NP08 348 aaPredicted RBP22.86■■□□□ 1.25
CHRNA7-228ENST00000637519 GDAP2Q9NXN4 497 aa22.86■■□□□ 1.25
CHRNA7-228ENST00000637519 SBDSQ9Y3A5 250 aaKnown RBP eCLIP22.86■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms