RNA–Protein interactions for RNA: ENST00000637293.1

GABRB3-223, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, human

TSL 5

Gene GABRB3, Length 120 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GABRB3-223	ENST00000637293	CHRNA2	Q15822	529 aa		2.8	□□□□□ -1.96
GABRB3-223	ENST00000637293	NTRK2	Q16620	822 aa		2.8	□□□□□ -1.96
GABRB3-223	ENST00000637293	MAPKAPK3	Q16644	382 aa		2.8	□□□□□ -1.96
GABRB3-223	ENST00000637293	CCDC178	Q5BJE1	867 aa		2.8	□□□□□ -1.96
GABRB3-223	ENST00000637293	C3orf38	Q5JPI3	329 aa		2.8	□□□□□ -1.96
GABRB3-223	ENST00000637293	TTC38	Q5R3I4	469 aa		2.8	□□□□□ -1.96
GABRB3-223	ENST00000637293	FAM69A	Q5T7M9	428 aa		2.8	□□□□□ -1.96
GABRB3-223	ENST00000637293	FAXC	Q5TGI0	409 aa		2.8	□□□□□ -1.96
GABRB3-223	ENST00000637293	FYB2	Q5VWT5	728 aa		2.8	□□□□□ -1.96
GABRB3-223	ENST00000637293	ANO7	Q6IWH7	933 aa		2.8	□□□□□ -1.96
GABRB3-223	ENST00000637293	LETMD1	Q6P1Q0	360 aa		2.8	□□□□□ -1.96
GABRB3-223	ENST00000637293	TMEM154	Q6P9G4	183 aa		2.8	□□□□□ -1.96
GABRB3-223	ENST00000637293	SLC2A7	Q6PXP3	512 aa		2.8	□□□□□ -1.96
GABRB3-223	ENST00000637293	GADL1	Q6ZQY3	521 aa		2.8	□□□□□ -1.96
GABRB3-223	ENST00000637293	UNC13D	Q70J99	1090 aa		2.8	□□□□□ -1.96
GABRB3-223	ENST00000637293	UBE3B	Q7Z3V4	1068 aa		2.8	□□□□□ -1.96
GABRB3-223	ENST00000637293	KRT28	Q7Z3Y7	464 aa		2.8	□□□□□ -1.96
GABRB3-223	ENST00000637293	RSPH3	Q86UC2	560 aa		2.8	□□□□□ -1.96
GABRB3-223	ENST00000637293	VSIG10L	Q86VR7	867 aa		2.8	□□□□□ -1.96
GABRB3-223	ENST00000637293	RHOT1	Q8IXI2	618 aa		2.8	□□□□□ -1.96
GABRB3-223	ENST00000637293	YAF2	Q8IY57	180 aa		2.8	□□□□□ -1.96
GABRB3-223	ENST00000637293	MAML2	Q8IZL2	1156 aa	Predicted RBP	2.8	□□□□□ -1.96
GABRB3-223	ENST00000637293	PLD6	Q8N2A8	252 aa	Known RBP	2.8	□□□□□ -1.96
GABRB3-223	ENST00000637293	LZTR1	Q8N653	840 aa		2.8	□□□□□ -1.96
GABRB3-223	ENST00000637293	GOLGA6L1	Q8N7Z2	621 aa		2.8	□□□□□ -1.96
GABRB3-223	ENST00000637293	VGLL2	Q8N8G2	317 aa		2.8	□□□□□ -1.96
GABRB3-223	ENST00000637293	POGLUT1	Q8NBL1	392 aa		2.8	□□□□□ -1.96
GABRB3-223	ENST00000637293	GLB1L3	Q8NCI6	653 aa	Predicted RBP	2.8	□□□□□ -1.96
GABRB3-223	ENST00000637293	IPMK	Q8NFU5	416 aa		2.8	□□□□□ -1.96
GABRB3-223	ENST00000637293	KIF18A	Q8NI77	898 aa		2.8	□□□□□ -1.96
GABRB3-223	ENST00000637293	ZCCHC10	Q8TBK6	192 aa		2.8	□□□□□ -1.96
GABRB3-223	ENST00000637293	DCAF11	Q8TEB1	546 aa		2.8	□□□□□ -1.96
GABRB3-223	ENST00000637293	XAGE3	Q8WTP9	111 aa		2.8	□□□□□ -1.96
GABRB3-223	ENST00000637293	POMGNT1	Q8WZA1	660 aa		2.8	□□□□□ -1.96
GABRB3-223	ENST00000637293	CPT1B	Q92523	772 aa		2.8	□□□□□ -1.96
GABRB3-223	ENST00000637293	VPS33A	Q96AX1	596 aa		2.8	□□□□□ -1.96
GABRB3-223	ENST00000637293	PGAP3	Q96FM1	320 aa	Predicted RBP	2.8	□□□□□ -1.96
GABRB3-223	ENST00000637293	ZNF764	Q96H86	408 aa	Predicted RBP	2.8	□□□□□ -1.96
GABRB3-223	ENST00000637293	APOPT1	Q96IL0	206 aa		2.8	□□□□□ -1.96
GABRB3-223	ENST00000637293	CLMN	Q96JQ2	1002 aa		2.8	□□□□□ -1.96
GABRB3-223	ENST00000637293	CLPTM1L	Q96KA5	538 aa		2.8	□□□□□ -1.96
GABRB3-223	ENST00000637293	CCDC114	Q96M63	670 aa		2.8	□□□□□ -1.96
GABRB3-223	ENST00000637293	MFSD14A	Q96MC6	490 aa		2.8	□□□□□ -1.96
GABRB3-223	ENST00000637293	SAMD11	Q96NU1	681 aa		2.8	□□□□□ -1.96
GABRB3-223	ENST00000637293	FCRL3	Q96P31	734 aa	Predicted RBP	2.8	□□□□□ -1.96
GABRB3-223	ENST00000637293	TUBGCP5	Q96RT8	1024 aa		2.8	□□□□□ -1.96
GABRB3-223	ENST00000637293	GDF15	Q99988	308 aa		2.8	□□□□□ -1.96
GABRB3-223	ENST00000637293	FAM118B	Q9BPY3	351 aa		2.8	□□□□□ -1.96
GABRB3-223	ENST00000637293	SLX1A	Q9BQ83	275 aa		2.8	□□□□□ -1.96
GABRB3-223	ENST00000637293	RHOXF2	Q9BQY4	288 aa		2.8	□□□□□ -1.96
GABRB3-223	ENST00000637293	CRACR2A	Q9BSW2	395 aa		2.8	□□□□□ -1.96
GABRB3-223	ENST00000637293	TRIM54	Q9BYV2	358 aa		2.8	□□□□□ -1.96
GABRB3-223	ENST00000637293	OSBPL6	Q9BZF3	934 aa		2.8	□□□□□ -1.96
GABRB3-223	ENST00000637293	KRT23	Q9C075	422 aa		2.8	□□□□□ -1.96
GABRB3-223	ENST00000637293	FTO	Q9C0B1	505 aa	Known RBP eCLIP	2.8	□□□□□ -1.96
GABRB3-223	ENST00000637293	NUCKS1	Q9H1E3	243 aa	Known RBP	2.8	□□□□□ -1.96
GABRB3-223	ENST00000637293	TP63	Q9H3D4	680 aa	Predicted RBP	2.8	□□□□□ -1.96
GABRB3-223	ENST00000637293	POFUT1	Q9H488	388 aa		2.8	□□□□□ -1.96
GABRB3-223	ENST00000637293	EPB41L1	Q9H4G0	881 aa		2.8	□□□□□ -1.96
GABRB3-223	ENST00000637293	MANSC1	Q9H8J5	431 aa		2.8	□□□□□ -1.96
GABRB3-223	ENST00000637293	CHODL	Q9H9P2	273 aa		2.8	□□□□□ -1.96
GABRB3-223	ENST00000637293	LIN28A	Q9H9Z2	209 aa	Known RBP	2.8	□□□□□ -1.96
GABRB3-223	ENST00000637293	PIDD1	Q9HB75	910 aa		2.8	□□□□□ -1.96
GABRB3-223	ENST00000637293	MKNK2	Q9HBH9	465 aa		2.8	□□□□□ -1.96
GABRB3-223	ENST00000637293	G6PC2	Q9NQR9	355 aa		2.8	□□□□□ -1.96
GABRB3-223	ENST00000637293	SIRT3	Q9NTG7	399 aa	Predicted RBP	2.8	□□□□□ -1.96
GABRB3-223	ENST00000637293	RBM12	Q9NTZ6	932 aa	Known RBP	2.8	□□□□□ -1.96
GABRB3-223	ENST00000637293	STK32B	Q9NY57	414 aa		2.8	□□□□□ -1.96
GABRB3-223	ENST00000637293	TAS2R3	Q9NYW6	316 aa		2.8	□□□□□ -1.96
GABRB3-223	ENST00000637293	COQ3	Q9NZJ6	369 aa		2.8	□□□□□ -1.96
GABRB3-223	ENST00000637293	CRIM1	Q9NZV1	1036 aa		2.8	□□□□□ -1.96
GABRB3-223	ENST00000637293	SELENON	Q9NZV5	590 aa		2.8	□□□□□ -1.96
GABRB3-223	ENST00000637293	AKAP7	Q9P0M2	348 aa	Predicted RBP	2.8	□□□□□ -1.96
GABRB3-223	ENST00000637293	COX16	Q9P0S2	106 aa		2.8	□□□□□ -1.96
GABRB3-223	ENST00000637293	PRSS50	Q9UI38	385 aa		2.8	□□□□□ -1.96
GABRB3-223	ENST00000637293	DSE	Q9UL01	958 aa		2.8	□□□□□ -1.96
GABRB3-223	ENST00000637293	CFAP45	Q9UL16	551 aa		2.8	□□□□□ -1.96
GABRB3-223	ENST00000637293	SCAF8	Q9UPN6	1271 aa	Known RBP	2.8	□□□□□ -1.96
GABRB3-223	ENST00000637293	LIPT1	Q9Y234	373 aa		2.8	□□□□□ -1.96
GABRB3-223	ENST00000637293	BTBD3	Q9Y2F9	522 aa		2.8	□□□□□ -1.96
GABRB3-223	ENST00000637293	MRPL11	Q9Y3B7	192 aa	Known RBP	2.8	□□□□□ -1.96
GABRB3-223	ENST00000637293	PCDHB1	Q9Y5F3	818 aa		2.8	□□□□□ -1.96
GABRB3-223	ENST00000637293	PCDHA3	Q9Y5H8	950 aa		2.8	□□□□□ -1.96
GABRB3-223	ENST00000637293	PCDHA13	Q9Y5I0	950 aa		2.8	□□□□□ -1.96
GABRB3-223	ENST00000637293	CDY2A	Q9Y6F7	541 aa		2.8	□□□□□ -1.96
GABRB3-223	ENST00000637293	PIAS3	Q9Y6X2	628 aa		2.8	□□□□□ -1.96
GABRB3-223	ENST00000637293	COL17A1	Q9UMD9	1497 aa	Predicted RBP	2.79	□□□□□ -1.96
GABRB3-223	ENST00000637293	LOC100289279	A0A1B0GTE1	492 aa		2.79	□□□□□ -1.96
GABRB3-223	ENST00000637293	ARHGAP10	A1A4S6	786 aa		2.79	□□□□□ -1.96
GABRB3-223	ENST00000637293	LRRD1	A4D1F6	860 aa		2.79	□□□□□ -1.96
GABRB3-223	ENST00000637293	CTAGE9	A4FU28	777 aa		2.79	□□□□□ -1.96
GABRB3-223	ENST00000637293	MBD3L4	A6NDZ8	208 aa	Predicted RBP	2.79	□□□□□ -1.96
GABRB3-223	ENST00000637293	MBD3L3	A6NE82	208 aa	Predicted RBP	2.79	□□□□□ -1.96
GABRB3-223	ENST00000637293	SAC3D1	A6NKF1	404 aa		2.79	□□□□□ -1.96
GABRB3-223	ENST00000637293	EFCAB8	A8MWE9	144 aa		2.79	□□□□□ -1.96
GABRB3-223	ENST00000637293	MYO1G	B0I1T2	1018 aa		2.79	□□□□□ -1.96
GABRB3-223	ENST00000637293	TMEM232	C9JQI7	657 aa		2.79	□□□□□ -1.96
GABRB3-223	ENST00000637293		E7EVH7	732 aa		2.79	□□□□□ -1.96
GABRB3-223	ENST00000637293		H0YAE9	185 aa		2.79	□□□□□ -1.96
GABRB3-223	ENST00000637293	SGK1	O00141	431 aa		2.79	□□□□□ -1.96

Retrieved 100 of 20,778 RNA–protein pairs in 39 ms