RNA–Protein interactions for RNA: ENST00000637158.1

CTSD-209, Transcript of cathepsin D, humanhuman

TSL 5

Gene CTSD, Length 1,200 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-209ENST00000637158 ACBD6Q9BR61 282 aa19.64■□□□□ 0.73
CTSD-209ENST00000637158 SMG9Q9H0W8 520 aaKnown RBP19.64■□□□□ 0.73
CTSD-209ENST00000637158 EBF3Q9H4W6 596 aa19.64■□□□□ 0.73
CTSD-209ENST00000637158 C2orf42Q9NWW7 574 aa19.64■□□□□ 0.73
CTSD-209ENST00000637158 SEL1LQ9UBV2 794 aa19.64■□□□□ 0.73
CTSD-209ENST00000637158 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.64■□□□□ 0.73
CTSD-209ENST00000637158 PCDHGA5Q9Y5G8 931 aa19.64■□□□□ 0.73
CTSD-209ENST00000637158 KMT2BQ9UMN6 2715 aaPredicted RBP19.64■□□□□ 0.73
CTSD-209ENST00000637158 AXIN1O15169 862 aa19.63■□□□□ 0.73
CTSD-209ENST00000637158 EXTL3O43909 919 aa19.63■□□□□ 0.73
CTSD-209ENST00000637158 GDF9O60383 454 aa19.63■□□□□ 0.73
CTSD-209ENST00000637158 PRPF40AO75400 957 aaKnown RBP19.63■□□□□ 0.73
CTSD-209ENST00000637158 LDHAP00338 332 aaKnown RBP19.63■□□□□ 0.73
CTSD-209ENST00000637158 CCDC192P0DO97 292 aa19.63■□□□□ 0.73
CTSD-209ENST00000637158 HMGA1P17096 107 aaKnown RBP19.63■□□□□ 0.73
CTSD-209ENST00000637158 TMEM86AQ8N2M4 240 aa19.63■□□□□ 0.73
CTSD-209ENST00000637158 CCDC26Q8TAB7 109 aa19.63■□□□□ 0.73
CTSD-209ENST00000637158 LRRC15Q8TF66 581 aa19.63■□□□□ 0.73
CTSD-209ENST00000637158 LEO1Q8WVC0 666 aaPredicted RBP19.63■□□□□ 0.73
CTSD-209ENST00000637158 USP13Q92995 863 aaPredicted RBP19.63■□□□□ 0.73
CTSD-209ENST00000637158 ARRDC1-AS1Q9H2J1 176 aa19.63■□□□□ 0.73
CTSD-209ENST00000637158 ABCB6Q9NP58 842 aa19.63■□□□□ 0.73
CTSD-209ENST00000637158 HPS4Q9NQG7 708 aa19.63■□□□□ 0.73
CTSD-209ENST00000637158 CCDC39Q9UFE4 941 aa19.63■□□□□ 0.73
CTSD-209ENST00000637158 HUS1O60921 280 aa19.62■□□□□ 0.73
CTSD-209ENST00000637158 EPN2O95208 641 aa19.62■□□□□ 0.73
CTSD-209ENST00000637158 RAP1GAPP47736 663 aa19.62■□□□□ 0.73
CTSD-209ENST00000637158 MYL7Q01449 175 aa19.62■□□□□ 0.73
CTSD-209ENST00000637158 FSTL4Q6MZW2 842 aa19.62■□□□□ 0.73
CTSD-209ENST00000637158 CRELD2Q6UXH1 353 aaPredicted RBP19.62■□□□□ 0.73
CTSD-209ENST00000637158 TMEM150AQ86TG1 271 aa19.62■□□□□ 0.73
CTSD-209ENST00000637158 SPATA18Q8TC71 538 aa19.62■□□□□ 0.73
CTSD-209ENST00000637158 ZC3H10Q96K80 434 aaKnown RBP19.62■□□□□ 0.73
CTSD-209ENST00000637158 STK17AQ9UEE5 414 aa19.62■□□□□ 0.73
CTSD-209ENST00000637158 MAGED2Q9UNF1 606 aaPredicted RBP19.62■□□□□ 0.73
CTSD-209ENST00000637158 CCL26Q9Y258 94 aa19.62■□□□□ 0.73
CTSD-209ENST00000637158 RALGAPA1Q6GYQ0 2036 aa19.62■□□□□ 0.73
CTSD-209ENST00000637158 TSC2P49815 1807 aa19.62■□□□□ 0.73
CTSD-209ENST00000637158 SCN1AP35498 2009 aa19.61■□□□□ 0.73
CTSD-209ENST00000637158 TISP43B9A030 160 aa19.61■□□□□ 0.73
CTSD-209ENST00000637158 GAP43P17677 238 aa19.61■□□□□ 0.73
CTSD-209ENST00000637158 ADSSP30520 456 aa19.61■□□□□ 0.73
CTSD-209ENST00000637158 FAM160A1Q05DH4 1040 aa19.61■□□□□ 0.73
CTSD-209ENST00000637158 SF3A1Q15459 793 aaKnown RBP19.61■□□□□ 0.73
CTSD-209ENST00000637158 C8orf34Q49A92 452 aa19.61■□□□□ 0.73
CTSD-209ENST00000637158 TXNDC8Q6A555 127 aa19.61■□□□□ 0.73
CTSD-209ENST00000637158 TRIM68Q6AZZ1 485 aa19.61■□□□□ 0.73
CTSD-209ENST00000637158 EFCAB13Q8IY85 973 aa19.61■□□□□ 0.73
CTSD-209ENST00000637158 CPA6Q8N4T0 437 aa19.61■□□□□ 0.73
CTSD-209ENST00000637158 LRRC52Q8N7C0 313 aa19.61■□□□□ 0.73
CTSD-209ENST00000637158 FSIP1Q8NA03 581 aa19.61■□□□□ 0.73
CTSD-209ENST00000637158 TRMT2BQ96GJ1 504 aaKnown RBP19.61■□□□□ 0.73
CTSD-209ENST00000637158 CHAMP1Q96JM3 812 aa19.61■□□□□ 0.73
CTSD-209ENST00000637158 MYRFLQ96LU7 910 aa19.61■□□□□ 0.73
CTSD-209ENST00000637158 ACCSQ96QU6 501 aa19.61■□□□□ 0.73
CTSD-209ENST00000637158 P2RY13Q9BPV8 354 aa19.61■□□□□ 0.73
CTSD-209ENST00000637158 PI4K2AQ9BTU6 479 aa19.61■□□□□ 0.73
CTSD-209ENST00000637158 MRPL44Q9H9J2 332 aaKnown RBP19.61■□□□□ 0.73
CTSD-209ENST00000637158 PCDHB13Q9Y5F0 798 aa19.61■□□□□ 0.73
CTSD-209ENST00000637158 RNF40O75150 1001 aa19.6■□□□□ 0.73
CTSD-209ENST00000637158 LHX1P48742 406 aa19.6■□□□□ 0.73
CTSD-209ENST00000637158 GALK1P51570 392 aa19.6■□□□□ 0.73
CTSD-209ENST00000637158 CDR1P51861 262 aa19.6■□□□□ 0.73
CTSD-209ENST00000637158 TFAMQ00059 246 aaKnown RBP19.6■□□□□ 0.73
CTSD-209ENST00000637158 ST3GAL2Q16842 350 aa19.6■□□□□ 0.73
CTSD-209ENST00000637158 SFR1Q86XK3 245 aa19.6■□□□□ 0.73
CTSD-209ENST00000637158 PDCL2Q8N4E4 241 aa19.6■□□□□ 0.73
CTSD-209ENST00000637158 FAM213AQ9BRX8 229 aa19.6■□□□□ 0.73
CTSD-209ENST00000637158 STRA6Q9BX79 667 aa19.6■□□□□ 0.73
CTSD-209ENST00000637158 TMEM206Q9H813 350 aa19.6■□□□□ 0.73
CTSD-209ENST00000637158 TMLHEQ9NVH6 421 aa19.6■□□□□ 0.73
CTSD-209ENST00000637158 DDX43Q9NXZ2 648 aaKnown RBP19.6■□□□□ 0.73
CTSD-209ENST00000637158 AGAP1Q9UPQ3 857 aa19.6■□□□□ 0.73
CTSD-209ENST00000637158 CHD8Q9HCK8 2581 aa19.6■□□□□ 0.73
CTSD-209ENST00000637158 OTOL1A6NHN0 477 aaPredicted RBP19.59■□□□□ 0.73
CTSD-209ENST00000637158 PPP1R37O75864 691 aa19.59■□□□□ 0.73
CTSD-209ENST00000637158 KRT37O76014 449 aa19.59■□□□□ 0.73
CTSD-209ENST00000637158 NOL4O94818 638 aa19.59■□□□□ 0.73
CTSD-209ENST00000637158 ITGB3P05106 788 aa19.59■□□□□ 0.73
CTSD-209ENST00000637158 USP17L7P0C7H9 530 aa19.59■□□□□ 0.73
CTSD-209ENST00000637158 GARTP22102 1010 aa19.59■□□□□ 0.73
CTSD-209ENST00000637158 POLR2BP30876 1174 aaKnown RBP19.59■□□□□ 0.73
CTSD-209ENST00000637158 TXLNAP40222 546 aa19.59■□□□□ 0.73
CTSD-209ENST00000637158 PXNP49023 591 aaPredicted RBP19.59■□□□□ 0.73
CTSD-209ENST00000637158 GRIN1Q05586 938 aa19.59■□□□□ 0.73
CTSD-209ENST00000637158 NR1H3Q13133 447 aa19.59■□□□□ 0.73
CTSD-209ENST00000637158 MTF1Q14872 753 aa19.59■□□□□ 0.73
CTSD-209ENST00000637158 CFAP221Q4G0U5 840 aa19.59■□□□□ 0.73
CTSD-209ENST00000637158 L1TD1Q5T7N2 865 aaKnown RBP19.59■□□□□ 0.73
CTSD-209ENST00000637158 PKN3Q6P5Z2 889 aa19.59■□□□□ 0.73
CTSD-209ENST00000637158 SV2BQ7L1I2 683 aa19.59■□□□□ 0.73
CTSD-209ENST00000637158 DYMQ7RTS9 669 aa19.59■□□□□ 0.73
CTSD-209ENST00000637158 KBTBD6Q86V97 674 aa19.59■□□□□ 0.73
CTSD-209ENST00000637158 BRSK2Q8IWQ3 736 aa19.59■□□□□ 0.73
CTSD-209ENST00000637158 OSCP1Q8WVF1 389 aa19.59■□□□□ 0.73
CTSD-209ENST00000637158 ATP2A3Q93084 1043 aa19.59■□□□□ 0.73
CTSD-209ENST00000637158 ACDQ96AP0 544 aa19.59■□□□□ 0.73
CTSD-209ENST00000637158 FUBP3Q96I24 572 aaKnown RBP eCLIP19.59■□□□□ 0.73
CTSD-209ENST00000637158 ECT2Q9H8V3 914 aa19.59■□□□□ 0.73
CTSD-209ENST00000637158 UPF2Q9HAU5 1272 aaKnown RBP19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms