RNA–Protein interactions for RNA: ENST00000636212.1

CLN6-213, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-213ENST00000636212 ABCB6Q9NP58 842 aa20.34■□□□□ 0.85
CLN6-213ENST00000636212 DLGAP2Q9P1A6 1054 aa20.34■□□□□ 0.85
CLN6-213ENST00000636212 KIF20AO95235 890 aa20.33■□□□□ 0.85
CLN6-213ENST00000636212 CD72P21854 359 aa20.33■□□□□ 0.85
CLN6-213ENST00000636212 ACAT1P24752 427 aaKnown RBP20.33■□□□□ 0.85
CLN6-213ENST00000636212 CYP24A1Q07973 514 aa20.33■□□□□ 0.85
CLN6-213ENST00000636212 TRPC3Q13507 836 aa20.33■□□□□ 0.85
CLN6-213ENST00000636212 MAPRE1Q15691 268 aaKnown RBP20.33■□□□□ 0.85
CLN6-213ENST00000636212 ZC3H14Q6PJT7 736 aaKnown RBP20.33■□□□□ 0.85
CLN6-213ENST00000636212 C4orf50Q6ZRC1 276 aa20.33■□□□□ 0.85
CLN6-213ENST00000636212 TRAPPC11Q7Z392 1133 aa20.33■□□□□ 0.85
CLN6-213ENST00000636212 ARID3BQ8IVW6 561 aaPredicted RBP20.33■□□□□ 0.85
CLN6-213ENST00000636212 CXorf38Q8TB03 319 aa20.33■□□□□ 0.85
CLN6-213ENST00000636212 TASP1Q9H6P5 420 aa20.33■□□□□ 0.85
CLN6-213ENST00000636212 SPATA6Q9NWH7 488 aaPredicted RBP20.33■□□□□ 0.85
CLN6-213ENST00000636212 UXTQ9UBK9 157 aaPredicted RBP20.33■□□□□ 0.85
CLN6-213ENST00000636212 NRG2O14511 850 aaPredicted RBP20.32■□□□□ 0.84
CLN6-213ENST00000636212 CHADO15335 359 aa20.32■□□□□ 0.84
CLN6-213ENST00000636212 LAMTOR5O43504 91 aa20.32■□□□□ 0.84
CLN6-213ENST00000636212 ACTN4O43707 911 aaKnown RBP20.32■□□□□ 0.84
CLN6-213ENST00000636212 PHACTR2O75167 634 aa20.32■□□□□ 0.84
CLN6-213ENST00000636212 CLSTN1O94985 981 aa20.32■□□□□ 0.84
CLN6-213ENST00000636212 GLULP15104 373 aa20.32■□□□□ 0.84
CLN6-213ENST00000636212 SYKP43405 635 aa20.32■□□□□ 0.84
CLN6-213ENST00000636212 TNNC1P63316 161 aa20.32■□□□□ 0.84
CLN6-213ENST00000636212 BECN1Q14457 450 aa20.32■□□□□ 0.84
CLN6-213ENST00000636212 SOWAHAQ2M3V2 549 aa20.32■□□□□ 0.84
CLN6-213ENST00000636212 STXBP5Q5T5C0 1151 aa20.32■□□□□ 0.84
CLN6-213ENST00000636212 C1orf228Q6PIY5 440 aa20.32■□□□□ 0.84
CLN6-213ENST00000636212 C12orf56Q8IXR9 622 aa20.32■□□□□ 0.84
CLN6-213ENST00000636212 MSANTD3Q96H12 275 aa20.32■□□□□ 0.84
CLN6-213ENST00000636212 CCDC34Q96HJ3 373 aa20.32■□□□□ 0.84
CLN6-213ENST00000636212 FAM84AQ96KN4 292 aa20.32■□□□□ 0.84
CLN6-213ENST00000636212 TMLHEQ9NVH6 421 aa20.32■□□□□ 0.84
CLN6-213ENST00000636212 THG1LQ9NWX6 298 aaKnown RBP20.32■□□□□ 0.84
CLN6-213ENST00000636212 OBP2AQ9NY56 170 aa20.32■□□□□ 0.84
CLN6-213ENST00000636212 GTF3C4Q9UKN8 822 aa20.32■□□□□ 0.84
CLN6-213ENST00000636212 CDH9Q9ULB4 789 aa20.32■□□□□ 0.84
CLN6-213ENST00000636212 MAGED2Q9UNF1 606 aaPredicted RBP20.32■□□□□ 0.84
CLN6-213ENST00000636212 PTPRJQ12913 1337 aa20.31■□□□□ 0.84
CLN6-213ENST00000636212 GABRDO14764 452 aa20.31■□□□□ 0.84
CLN6-213ENST00000636212 LRRN2O75325 713 aa20.31■□□□□ 0.84
CLN6-213ENST00000636212 DDX6P26196 483 aaKnown RBP eCLIP20.31■□□□□ 0.84
CLN6-213ENST00000636212 WEE1P30291 646 aa20.31■□□□□ 0.84
CLN6-213ENST00000636212 CYP4F8P98187 520 aa20.31■□□□□ 0.84
CLN6-213ENST00000636212 ARHGAP29Q52LW3 1261 aa20.31■□□□□ 0.84
CLN6-213ENST00000636212 FAM3CQ92520 227 aa20.31■□□□□ 0.84
CLN6-213ENST00000636212 MRPS31Q92665 395 aaKnown RBP20.31■□□□□ 0.84
CLN6-213ENST00000636212 FUBP3Q96I24 572 aaKnown RBP eCLIP20.31■□□□□ 0.84
CLN6-213ENST00000636212 SYT15Q9BQS2 421 aa20.31■□□□□ 0.84
CLN6-213ENST00000636212 SNX25Q9H3E2 840 aa20.31■□□□□ 0.84
CLN6-213ENST00000636212 SEMA4AQ9H3S1 761 aa20.31■□□□□ 0.84
CLN6-213ENST00000636212 NDRG2Q9UN36 371 aaKnown RBP20.31■□□□□ 0.84
CLN6-213ENST00000636212 PIAS3Q9Y6X2 628 aa20.31■□□□□ 0.84
CLN6-213ENST00000636212 MIA3Q5JRA6 1907 aa20.31■□□□□ 0.84
CLN6-213ENST00000636212 TARSP26639 723 aaKnown RBP20.3■□□□□ 0.84
CLN6-213ENST00000636212 AVPR1AP37288 418 aa20.3■□□□□ 0.84
CLN6-213ENST00000636212 RPS9P46781 194 aaKnown RBP20.3■□□□□ 0.84
CLN6-213ENST00000636212 KPNA1P52294 538 aaPredicted RBP20.3■□□□□ 0.84
CLN6-213ENST00000636212 AP3M2P53677 418 aa20.3■□□□□ 0.84
CLN6-213ENST00000636212 FCHO2Q0JRZ9 810 aa20.3■□□□□ 0.84
CLN6-213ENST00000636212 KMT5BQ4FZB7 885 aa20.3■□□□□ 0.84
CLN6-213ENST00000636212 CFAP221Q4G0U5 840 aa20.3■□□□□ 0.84
CLN6-213ENST00000636212 OSTM1Q86WC4 334 aa20.3■□□□□ 0.84
CLN6-213ENST00000636212 MAGEC2Q9UBF1 373 aaPredicted RBP20.3■□□□□ 0.84
CLN6-213ENST00000636212 MTF2Q9Y483 593 aaPredicted RBP20.3■□□□□ 0.84
CLN6-213ENST00000636212 PRR23AA6NEV1 266 aa20.29■□□□□ 0.84
CLN6-213ENST00000636212 SOBPA7XYQ1 873 aa20.29■□□□□ 0.84
CLN6-213ENST00000636212 KLRC4O43908 158 aa20.29■□□□□ 0.84
CLN6-213ENST00000636212 FAM163BP0C2L3 166 aa20.29■□□□□ 0.84
CLN6-213ENST00000636212 WARSP23381 471 aaKnown RBP20.29■□□□□ 0.84
CLN6-213ENST00000636212 CYP2F1P24903 491 aa20.29■□□□□ 0.84
CLN6-213ENST00000636212 MLLT6P55198 1093 aaPredicted RBP20.29■□□□□ 0.84
CLN6-213ENST00000636212 NLRP12P59046 1061 aa20.29■□□□□ 0.84
CLN6-213ENST00000636212 PLCB2Q00722 1185 aa20.29■□□□□ 0.84
CLN6-213ENST00000636212 STK4Q13043 487 aa20.29■□□□□ 0.84
CLN6-213ENST00000636212 DDR2Q16832 855 aa20.29■□□□□ 0.84
CLN6-213ENST00000636212 GPIHBP1Q8IV16 184 aa20.29■□□□□ 0.84
CLN6-213ENST00000636212 SCN4BQ8IWT1 228 aa20.29■□□□□ 0.84
CLN6-213ENST00000636212 CELF5Q8N6W0 485 aaKnown RBP20.29■□□□□ 0.84
CLN6-213ENST00000636212 BPIFB1Q8TDL5 484 aa20.29■□□□□ 0.84
CLN6-213ENST00000636212 SYAP1Q96A49 352 aaPredicted RBP20.29■□□□□ 0.84
CLN6-213ENST00000636212 C8orf33Q9H7E9 229 aaPredicted RBP20.29■□□□□ 0.84
CLN6-213ENST00000636212 IL21Q9HBE4 155 aa20.29■□□□□ 0.84
CLN6-213ENST00000636212 HPSEQ9Y251 543 aa20.29■□□□□ 0.84
CLN6-213ENST00000636212 ZDHHC9Q9Y397 364 aa20.29■□□□□ 0.84
CLN6-213ENST00000636212 RPN1P04843 607 aaKnown RBP20.28■□□□□ 0.84
CLN6-213ENST00000636212 PDGFRBP09619 1106 aa20.28■□□□□ 0.84
CLN6-213ENST00000636212 SP9P0CG40 484 aa20.28■□□□□ 0.84
CLN6-213ENST00000636212 ANXA13P27216 316 aa20.28■□□□□ 0.84
CLN6-213ENST00000636212 ATICP31939 592 aa20.28■□□□□ 0.84
CLN6-213ENST00000636212 MAGEA11P43364 429 aa20.28■□□□□ 0.84
CLN6-213ENST00000636212 BIRC3Q13489 604 aa20.28■□□□□ 0.84
CLN6-213ENST00000636212 WDR72Q3MJ13 1102 aa20.28■□□□□ 0.84
CLN6-213ENST00000636212 SCARA3Q6AZY7 606 aa20.28■□□□□ 0.84
CLN6-213ENST00000636212 CMTM8Q8IZV2 173 aa20.28■□□□□ 0.84
CLN6-213ENST00000636212 FSIP1Q8NA03 581 aa20.28■□□□□ 0.84
CLN6-213ENST00000636212 OR6B3Q8NGW1 331 aa20.28■□□□□ 0.84
CLN6-213ENST00000636212 CLDN23Q96B33 292 aa20.28■□□□□ 0.84
CLN6-213ENST00000636212 MKNK1Q9BUB5 465 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms