RNA–Protein interactions for RNA: ENST00000636194.1

SCN1A-212, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 8,508 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-212ENST00000636194 RASSF1Q9NS23 344 aa6.24□□□□□ -1.41
SCN1A-212ENST00000636194 CKLFQ9UBR5 152 aa6.24□□□□□ -1.41
SCN1A-212ENST00000636194 SLC9A2Q9UBY0 812 aa6.24□□□□□ -1.41
SCN1A-212ENST00000636194 PRG4Q92954 1404 aaPredicted RBP6.24□□□□□ -1.41
SCN1A-212ENST00000636194 TSPAN1O60635 241 aa6.24□□□□□ -1.41
SCN1A-212ENST00000636194 SLC25A12O75746 678 aa6.24□□□□□ -1.41
SCN1A-212ENST00000636194 GPC3P51654 580 aa6.24□□□□□ -1.41
SCN1A-212ENST00000636194 SCRN3Q0VDG4 424 aa6.24□□□□□ -1.41
SCN1A-212ENST00000636194 DDHD1Q8NEL9 900 aa6.24□□□□□ -1.41
SCN1A-212ENST00000636194 CIDECQ96AQ7 238 aaPredicted RBP6.24□□□□□ -1.41
SCN1A-212ENST00000636194 LRRC46Q96FV0 321 aa6.24□□□□□ -1.41
SCN1A-212ENST00000636194 TGS1Q96RS0 853 aaKnown RBP6.24□□□□□ -1.41
SCN1A-212ENST00000636194 TNFSF13BQ9Y275 285 aa6.24□□□□□ -1.41
SCN1A-212ENST00000636194 RPH3AQ9Y2J0 694 aaPredicted RBP6.24□□□□□ -1.41
SCN1A-212ENST00000636194 PCDHB7Q9Y5E2 793 aa6.24□□□□□ -1.41
SCN1A-212ENST00000636194 FLT4P35916 1363 aa6.24□□□□□ -1.41
SCN1A-212ENST00000636194 ZMYM6O95789 1325 aa6.24□□□□□ -1.41
SCN1A-212ENST00000636194 ADGRA2Q96PE1 1338 aa6.24□□□□□ -1.41
SCN1A-212ENST00000636194 FAM135BQ49AJ0 1406 aa6.24□□□□□ -1.41
SCN1A-212ENST00000636194 USP1O94782 785 aa6.24□□□□□ -1.41
SCN1A-212ENST00000636194 ATP2C1P98194 919 aaPredicted RBP6.24□□□□□ -1.41
SCN1A-212ENST00000636194 HDLBPQ00341 1268 aaKnown RBP6.24□□□□□ -1.41
SCN1A-212ENST00000636194 SLFN13Q68D06 897 aa6.24□□□□□ -1.41
SCN1A-212ENST00000636194 SCARA3Q6AZY7 606 aa6.24□□□□□ -1.41
SCN1A-212ENST00000636194 HEATR4Q86WZ0 1026 aa6.24□□□□□ -1.41
SCN1A-212ENST00000636194 XXYLT1Q8NBI6 393 aa6.24□□□□□ -1.41
SCN1A-212ENST00000636194 SNIP1Q8TAD8 396 aaKnown RBP6.24□□□□□ -1.41
SCN1A-212ENST00000636194 BSNDQ8WZ55 320 aa6.24□□□□□ -1.41
SCN1A-212ENST00000636194 MRPL4Q9BYD3 311 aaKnown RBP6.24□□□□□ -1.41
SCN1A-212ENST00000636194 ACAD9Q9H845 621 aa6.24□□□□□ -1.41
SCN1A-212ENST00000636194 SLC12A4Q9UP95 1085 aa6.24□□□□□ -1.41
SCN1A-212ENST00000636194 AQRO60306 1485 aaKnown RBP eCLIP6.24□□□□□ -1.41
SCN1A-212ENST00000636194 ADGRL1O94910 1474 aa6.24□□□□□ -1.41
SCN1A-212ENST00000636194 ADGRA3Q8IWK6 1321 aa6.24□□□□□ -1.41
SCN1A-212ENST00000636194 CCDC195A0A1B0GUA6 201 aa6.24□□□□□ -1.41
SCN1A-212ENST00000636194 TCP10L2B9ZVM9 353 aa6.24□□□□□ -1.41
SCN1A-212ENST00000636194 KLHL2O95198 593 aa6.24□□□□□ -1.41
SCN1A-212ENST00000636194 FCGR1AP12314 374 aa6.24□□□□□ -1.41
SCN1A-212ENST00000636194 ADD1P35611 737 aaKnown RBP6.24□□□□□ -1.41
SCN1A-212ENST00000636194 RGS6P49758 472 aa6.24□□□□□ -1.41
SCN1A-212ENST00000636194 PER3P56645 1201 aa6.24□□□□□ -1.41
SCN1A-212ENST00000636194 PPARAQ07869 468 aa6.24□□□□□ -1.41
SCN1A-212ENST00000636194 WDR93Q6P2C0 686 aa6.24□□□□□ -1.41
SCN1A-212ENST00000636194 REPS1Q96D71 796 aa6.24□□□□□ -1.41
SCN1A-212ENST00000636194 XAGE2Q96GT9 111 aa6.24□□□□□ -1.41
SCN1A-212ENST00000636194 C1QTNF1Q9BXJ1 281 aa6.24□□□□□ -1.41
SCN1A-212ENST00000636194 RERGLQ9H628 205 aa6.24□□□□□ -1.41
SCN1A-212ENST00000636194 ADAM22Q9P0K1 906 aa6.24□□□□□ -1.41
SCN1A-212ENST00000636194 HCN3Q9P1Z3 774 aa6.24□□□□□ -1.41
SCN1A-212ENST00000636194 ABCC5O15440 1437 aa6.24□□□□□ -1.41
SCN1A-212ENST00000636194 HAUS5O94927 633 aa6.24□□□□□ -1.41
SCN1A-212ENST00000636194 CDH18Q13634 790 aa6.24□□□□□ -1.41
SCN1A-212ENST00000636194 SLC45A4Q5BKX6 768 aa6.24□□□□□ -1.41
SCN1A-212ENST00000636194 DALRD3Q5D0E6 543 aaKnown RBP6.24□□□□□ -1.41
SCN1A-212ENST00000636194 R3HCC1LQ7Z5L2 792 aaKnown RBP6.24□□□□□ -1.41
SCN1A-212ENST00000636194 LCORLQ8N3X6 602 aa6.24□□□□□ -1.41
SCN1A-212ENST00000636194 CLMNQ96JQ2 1002 aa6.24□□□□□ -1.41
SCN1A-212ENST00000636194 ZCCHC2Q9C0B9 1178 aaKnown RBP6.24□□□□□ -1.41
SCN1A-212ENST00000636194 ELL3Q9HB65 397 aaPredicted RBP6.24□□□□□ -1.41
SCN1A-212ENST00000636194 CYP4F11Q9HBI6 524 aa6.24□□□□□ -1.41
SCN1A-212ENST00000636194 TRIM43BA6NCK2 446 aa6.23□□□□□ -1.41
SCN1A-212ENST00000636194 ZNF500O60304 480 aaPredicted RBP6.23□□□□□ -1.41
SCN1A-212ENST00000636194 SOAT2O75908 522 aa6.23□□□□□ -1.41
SCN1A-212ENST00000636194 PARNO95453 639 aaKnown RBP6.23□□□□□ -1.41
SCN1A-212ENST00000636194 HLA-DQA2P01906 255 aa6.23□□□□□ -1.41
SCN1A-212ENST00000636194 RPLP2P05387 115 aaKnown RBP6.23□□□□□ -1.41
SCN1A-212ENST00000636194 VAV1P15498 845 aa6.23□□□□□ -1.41
SCN1A-212ENST00000636194 MARK3P27448 753 aa6.23□□□□□ -1.41
SCN1A-212ENST00000636194 TMBIM6P55061 237 aa6.23□□□□□ -1.41
SCN1A-212ENST00000636194 UBE2Q1Q7Z7E8 422 aa6.23□□□□□ -1.41
SCN1A-212ENST00000636194 SYTL5Q8TDW5 730 aaPredicted RBP6.23□□□□□ -1.41
SCN1A-212ENST00000636194 FICDQ9BVA6 458 aa6.23□□□□□ -1.41
SCN1A-212ENST00000636194 MXD3Q9BW11 206 aa6.23□□□□□ -1.41
SCN1A-212ENST00000636194 CDH7Q9ULB5 785 aa6.23□□□□□ -1.41
SCN1A-212ENST00000636194 TRPC5OSA6NMA1 111 aa6.23□□□□□ -1.41
SCN1A-212ENST00000636194 EYA2O00167 538 aa6.23□□□□□ -1.41
SCN1A-212ENST00000636194 FGAP02671 866 aa6.23□□□□□ -1.41
SCN1A-212ENST00000636194 RPL9P32969 192 aaKnown RBP6.23□□□□□ -1.41
SCN1A-212ENST00000636194 OSTNP61366 133 aa6.23□□□□□ -1.41
SCN1A-212ENST00000636194 GTF2IP78347 998 aa6.23□□□□□ -1.41
SCN1A-212ENST00000636194 GPS1Q13098 491 aa6.23□□□□□ -1.41
SCN1A-212ENST00000636194 PNOCQ13519 176 aa6.23□□□□□ -1.41
SCN1A-212ENST00000636194 COBLL1Q53SF7 1204 aa6.23□□□□□ -1.41
SCN1A-212ENST00000636194 METTL21CQ5VZV1 264 aa6.23□□□□□ -1.41
SCN1A-212ENST00000636194 LMBRD2Q68DH5 695 aaPredicted RBP6.23□□□□□ -1.41
SCN1A-212ENST00000636194 CASP12Q6UXS9 341 aa6.23□□□□□ -1.41
SCN1A-212ENST00000636194 AGGF1Q8N302 714 aaeCLIP6.23□□□□□ -1.41
SCN1A-212ENST00000636194 TMA16Q96EY4 203 aaKnown RBP6.23□□□□□ -1.41
SCN1A-212ENST00000636194 CYFIP2Q96F07 1278 aa6.23□□□□□ -1.41
SCN1A-212ENST00000636194 SLC13A1Q9BZW2 595 aa6.23□□□□□ -1.41
SCN1A-212ENST00000636194 ZSWIM6Q9HCJ5 1215 aa6.23□□□□□ -1.41
SCN1A-212ENST00000636194 SLC39A2Q9NP94 309 aa6.23□□□□□ -1.41
SCN1A-212ENST00000636194 BABAM1Q9NWV8 329 aa6.23□□□□□ -1.41
SCN1A-212ENST00000636194 ARL15Q9NXU5 204 aa6.23□□□□□ -1.41
SCN1A-212ENST00000636194 GDAQ9Y2T3 454 aa6.23□□□□□ -1.41
SCN1A-212ENST00000636194 GIT1Q9Y2X7 761 aa6.23□□□□□ -1.41
SCN1A-212ENST00000636194 KIF21AQ7Z4S6 1674 aa6.23□□□□□ -1.41
SCN1A-212ENST00000636194 VWA5AO00534 786 aa6.23□□□□□ -1.41
SCN1A-212ENST00000636194 GATBO75879 557 aaKnown RBP6.23□□□□□ -1.41
SCN1A-212ENST00000636194 HLA-DRAP01903 254 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms