RNA–Protein interactions for RNA: ENST00000636020.1

CLN6-212, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-212ENST00000636020 CCDC169A6NNP5 214 aa19.7■□□□□ 0.74
CLN6-212ENST00000636020 K7EQS6 105 aa19.7■□□□□ 0.74
CLN6-212ENST00000636020 MAP3K13O43283 966 aa19.7■□□□□ 0.74
CLN6-212ENST00000636020 OPHN1O60890 802 aa19.7■□□□□ 0.74
CLN6-212ENST00000636020 NMT1P30419 496 aaKnown RBP19.7■□□□□ 0.74
CLN6-212ENST00000636020 KRT2P35908 639 aa19.7■□□□□ 0.74
CLN6-212ENST00000636020 PEX3P56589 373 aa19.7■□□□□ 0.74
CLN6-212ENST00000636020 C2orf27AQ580R0 203 aa19.7■□□□□ 0.74
CLN6-212ENST00000636020 TXNDC8Q6A555 127 aa19.7■□□□□ 0.74
CLN6-212ENST00000636020 MON1AQ86VX9 555 aa19.7■□□□□ 0.74
CLN6-212ENST00000636020 FRMD1Q8N878 549 aa19.7■□□□□ 0.74
CLN6-212ENST00000636020 OR10T2Q8NGX3 314 aa19.7■□□□□ 0.74
CLN6-212ENST00000636020 MDM1Q8TC05 714 aa19.7■□□□□ 0.74
CLN6-212ENST00000636020 OSCP1Q8WVF1 389 aa19.7■□□□□ 0.74
CLN6-212ENST00000636020 GTPBP2Q9BX10 602 aaKnown RBP19.7■□□□□ 0.74
CLN6-212ENST00000636020 ZSWIM6Q9HCJ5 1215 aa19.7■□□□□ 0.74
CLN6-212ENST00000636020 DUS2Q9NX74 493 aaKnown RBP19.7■□□□□ 0.74
CLN6-212ENST00000636020 ARHGAP28Q9P2N2 729 aa19.7■□□□□ 0.74
CLN6-212ENST00000636020 ADAMTS9Q9P2N4 1935 aa19.7■□□□□ 0.74
CLN6-212ENST00000636020 DTNBO60941 627 aa19.69■□□□□ 0.74
CLN6-212ENST00000636020 CDC45O75419 566 aa19.69■□□□□ 0.74
CLN6-212ENST00000636020 CDKL5O76039 1030 aa19.69■□□□□ 0.74
CLN6-212ENST00000636020 CFIP05156 583 aa19.69■□□□□ 0.74
CLN6-212ENST00000636020 HNRNPLP14866 589 aaKnown RBP eCLIP19.69■□□□□ 0.74
CLN6-212ENST00000636020 HMGA1P17096 107 aaKnown RBP19.69■□□□□ 0.74
CLN6-212ENST00000636020 CYP3A5P20815 502 aa19.69■□□□□ 0.74
CLN6-212ENST00000636020 ITPKAP23677 461 aa19.69■□□□□ 0.74
CLN6-212ENST00000636020 HOXD12P35452 270 aa19.69■□□□□ 0.74
CLN6-212ENST00000636020 CDR1P51861 262 aa19.69■□□□□ 0.74
CLN6-212ENST00000636020 SPAG1Q07617 926 aa19.69■□□□□ 0.74
CLN6-212ENST00000636020 MTF1Q14872 753 aa19.69■□□□□ 0.74
CLN6-212ENST00000636020 DUOXA1Q1HG43 343 aa19.69■□□□□ 0.74
CLN6-212ENST00000636020 SLC39A12Q504Y0 691 aa19.69■□□□□ 0.74
CLN6-212ENST00000636020 SPDYCQ5MJ68 293 aa19.69■□□□□ 0.74
CLN6-212ENST00000636020 TMEM92Q6UXU6 159 aa19.69■□□□□ 0.74
CLN6-212ENST00000636020 CCDC33Q8N5R6 958 aa19.69■□□□□ 0.74
CLN6-212ENST00000636020 SPACA7Q96KW9 195 aa19.69■□□□□ 0.74
CLN6-212ENST00000636020 YTHDC1Q96MU7 727 aaKnown RBP19.69■□□□□ 0.74
CLN6-212ENST00000636020 PLEKHA5Q9HAU0 1116 aa19.69■□□□□ 0.74
CLN6-212ENST00000636020 NAV2Q8IVL1 2488 aa19.69■□□□□ 0.74
CLN6-212ENST00000636020 ATXN2Q99700 1313 aaKnown RBP19.69■□□□□ 0.74
CLN6-212ENST00000636020 ALDH1A2O94788 518 aa19.68■□□□□ 0.74
CLN6-212ENST00000636020 SEC13P55735 322 aa19.68■□□□□ 0.74
CLN6-212ENST00000636020 GFPT1Q06210 699 aaPredicted RBP19.68■□□□□ 0.74
CLN6-212ENST00000636020 DMP1Q13316 513 aaPredicted RBP19.68■□□□□ 0.74
CLN6-212ENST00000636020 TRIP6Q15654 476 aaKnown RBP19.68■□□□□ 0.74
CLN6-212ENST00000636020 EML3Q32P44 896 aa19.68■□□□□ 0.74
CLN6-212ENST00000636020 LYSMD4Q5XG99 296 aa19.68■□□□□ 0.74
CLN6-212ENST00000636020 TTC30AQ86WT1 665 aa19.68■□□□□ 0.74
CLN6-212ENST00000636020 CEP76Q8TAP6 659 aa19.68■□□□□ 0.74
CLN6-212ENST00000636020 ATP2A3Q93084 1043 aa19.68■□□□□ 0.74
CLN6-212ENST00000636020 ZCWPW1Q9H0M4 648 aa19.68■□□□□ 0.74
CLN6-212ENST00000636020 CAPN10Q9HC96 672 aa19.68■□□□□ 0.74
CLN6-212ENST00000636020 UBQLN1Q9UMX0 589 aaKnown RBP19.68■□□□□ 0.74
CLN6-212ENST00000636020 GTF3C5Q9Y5Q8 519 aaPredicted RBP19.68■□□□□ 0.74
CLN6-212ENST00000636020 WNT6Q9Y6F9 365 aa19.68■□□□□ 0.74
CLN6-212ENST00000636020 TTC26A0AVF1 554 aa19.67■□□□□ 0.74
CLN6-212ENST00000636020 SERPINF2P08697 491 aa19.67■□□□□ 0.74
CLN6-212ENST00000636020 CXCL8P10145 99 aa19.67■□□□□ 0.74
CLN6-212ENST00000636020 HAPLN1P10915 354 aaPredicted RBP19.67■□□□□ 0.74
CLN6-212ENST00000636020 IFNAR2P48551 515 aa19.67■□□□□ 0.74
CLN6-212ENST00000636020 GUCY2FP51841 1108 aa19.67■□□□□ 0.74
CLN6-212ENST00000636020 LILRA4P59901 499 aa19.67■□□□□ 0.74
CLN6-212ENST00000636020 C19orf57Q0VDD7 668 aa19.67■□□□□ 0.74
CLN6-212ENST00000636020 SCRN1Q12765 414 aa19.67■□□□□ 0.74
CLN6-212ENST00000636020 NOLC1Q14978 699 aaKnown RBP eCLIP19.67■□□□□ 0.74
CLN6-212ENST00000636020 ZNF77Q15935 545 aa19.67■□□□□ 0.74
CLN6-212ENST00000636020 LMBRD2Q68DH5 695 aaPredicted RBP19.67■□□□□ 0.74
CLN6-212ENST00000636020 DAW1Q8N136 415 aa19.67■□□□□ 0.74
CLN6-212ENST00000636020 MINDY1Q8N5J2 469 aa19.67■□□□□ 0.74
CLN6-212ENST00000636020 PNPLA1Q8N8W4 532 aa19.67■□□□□ 0.74
CLN6-212ENST00000636020 MRPS31Q92665 395 aaKnown RBP19.67■□□□□ 0.74
CLN6-212ENST00000636020 SENP8Q96LD8 212 aa19.67■□□□□ 0.74
CLN6-212ENST00000636020 CAMK1GQ96NX5 476 aa19.67■□□□□ 0.74
CLN6-212ENST00000636020 BHMT2Q9H2M3 363 aa19.67■□□□□ 0.74
CLN6-212ENST00000636020 CIZ1Q9ULV3 898 aaPredicted RBP19.67■□□□□ 0.74
CLN6-212ENST00000636020 RBM19Q9Y4C8 960 aaKnown RBP19.67■□□□□ 0.74
CLN6-212ENST00000636020 PPEF2O14830 753 aa19.66■□□□□ 0.74
CLN6-212ENST00000636020 SH3BP5O60239 455 aa19.66■□□□□ 0.74
CLN6-212ENST00000636020 TOM1L1O75674 476 aa19.66■□□□□ 0.74
CLN6-212ENST00000636020 FTH1P19P0C7X4 201 aa19.66■□□□□ 0.74
CLN6-212ENST00000636020 ODC1P11926 461 aa19.66■□□□□ 0.74
CLN6-212ENST00000636020 MUTP22033 750 aa19.66■□□□□ 0.74
CLN6-212ENST00000636020 OPRD1P41143 372 aa19.66■□□□□ 0.74
CLN6-212ENST00000636020 FAM160A1Q05DH4 1040 aa19.66■□□□□ 0.74
CLN6-212ENST00000636020 NR1H3Q13133 447 aa19.66■□□□□ 0.74
CLN6-212ENST00000636020 ECM1Q16610 540 aa19.66■□□□□ 0.74
CLN6-212ENST00000636020 MAP7D1Q3KQU3 841 aa19.66■□□□□ 0.74
CLN6-212ENST00000636020 OR2I1PQ8NGU4 316 aa19.66■□□□□ 0.74
CLN6-212ENST00000636020 ERMNQ8TAM6 284 aa19.66■□□□□ 0.74
CLN6-212ENST00000636020 WHAMMQ8TF30 809 aa19.66■□□□□ 0.74
CLN6-212ENST00000636020 BRMS1Q9HCU9 246 aa19.66■□□□□ 0.74
CLN6-212ENST00000636020 KMT5AQ9NQR1 393 aa19.66■□□□□ 0.74
CLN6-212ENST00000636020 DNAAF2Q9NVR5 837 aaKnown RBP19.66■□□□□ 0.74
CLN6-212ENST00000636020 CYP46A1Q9Y6A2 500 aa19.66■□□□□ 0.74
CLN6-212ENST00000636020 PCDH15Q96QU1 1955 aa19.66■□□□□ 0.74
CLN6-212ENST00000636020 CYP11A1P05108 521 aa19.65■□□□□ 0.74
CLN6-212ENST00000636020 MRPS21P82921 87 aaKnown RBP19.65■□□□□ 0.74
CLN6-212ENST00000636020 USP4Q13107 963 aa19.65■□□□□ 0.74
CLN6-212ENST00000636020 LRRTM3Q86VH5 581 aa19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms