RNA–Protein interactions for RNA: ENST00000635917.1

CACNA1A-219, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 1,832 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-219ENST00000635917 KLF1Q13351 362 aaPredicted RBP13.25□□□□□ -0.29
CACNA1A-219ENST00000635917 NNTQ13423 1086 aa13.25□□□□□ -0.29
CACNA1A-219ENST00000635917 SMC1AQ14683 1233 aaKnown RBP13.25□□□□□ -0.29
CACNA1A-219ENST00000635917 FAM153CQ494X1 144 aa13.25□□□□□ -0.29
CACNA1A-219ENST00000635917 SGO2Q562F6 1265 aa13.25□□□□□ -0.29
CACNA1A-219ENST00000635917 FBXO47Q5MNV8 452 aa13.25□□□□□ -0.29
CACNA1A-219ENST00000635917 DNAJC24Q6P3W2 148 aa13.25□□□□□ -0.29
CACNA1A-219ENST00000635917 ANKS1BQ7Z6G8 1248 aa13.25□□□□□ -0.29
CACNA1A-219ENST00000635917 KATNAL2Q8IYT4 538 aa13.25□□□□□ -0.29
CACNA1A-219ENST00000635917 C12orf29Q8N999 325 aa13.25□□□□□ -0.29
CACNA1A-219ENST00000635917 CCDC26Q8TAB7 109 aa13.25□□□□□ -0.29
CACNA1A-219ENST00000635917 FNIP1Q8TF40 1166 aa13.25□□□□□ -0.29
CACNA1A-219ENST00000635917 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.25□□□□□ -0.29
CACNA1A-219ENST00000635917 MCRS1Q96EZ8 462 aa13.25□□□□□ -0.29
CACNA1A-219ENST00000635917 GDAP1L1Q96MZ0 367 aa13.25□□□□□ -0.29
CACNA1A-219ENST00000635917 MCEEQ96PE7 176 aa13.25□□□□□ -0.29
CACNA1A-219ENST00000635917 PPP1R10Q96QC0 940 aaKnown RBP13.25□□□□□ -0.29
CACNA1A-219ENST00000635917 APOL6Q9BWW8 343 aa13.25□□□□□ -0.29
CACNA1A-219ENST00000635917 AGO3Q9H9G7 860 aaKnown RBP13.25□□□□□ -0.29
CACNA1A-219ENST00000635917 ST7Q9NRC1 585 aa13.25□□□□□ -0.29
CACNA1A-219ENST00000635917 CREBZFQ9NS37 354 aa13.25□□□□□ -0.29
CACNA1A-219ENST00000635917 FAM153AQ9UHL3 310 aa13.25□□□□□ -0.29
CACNA1A-219ENST00000635917 MEIS3P2A8K0S8 358 aa13.24□□□□□ -0.29
CACNA1A-219ENST00000635917 F8VP50 259 aa13.24□□□□□ -0.29
CACNA1A-219ENST00000635917 RPS6KA5O75582 802 aa13.24□□□□□ -0.29
CACNA1A-219ENST00000635917 RPLP2P05387 115 aaKnown RBP13.24□□□□□ -0.29
CACNA1A-219ENST00000635917 LRPAP1P30533 357 aa13.24□□□□□ -0.29
CACNA1A-219ENST00000635917 CHRNA3P32297 505 aa13.24□□□□□ -0.29
CACNA1A-219ENST00000635917 RFC1P35251 1148 aaPredicted RBP13.24□□□□□ -0.29
CACNA1A-219ENST00000635917 PAK2Q13177 524 aa13.24□□□□□ -0.29
CACNA1A-219ENST00000635917 PDCLQ13371 301 aa13.24□□□□□ -0.29
CACNA1A-219ENST00000635917 ZNF268Q14587 947 aaPredicted RBP13.24□□□□□ -0.29
CACNA1A-219ENST00000635917 TRIM71Q2Q1W2 868 aaKnown RBP13.24□□□□□ -0.29
CACNA1A-219ENST00000635917 LRRC38Q5VT99 294 aa13.24□□□□□ -0.29
CACNA1A-219ENST00000635917 DUPD1Q68J44 220 aa13.24□□□□□ -0.29
CACNA1A-219ENST00000635917 TWF2Q6IBS0 349 aaKnown RBP13.24□□□□□ -0.29
CACNA1A-219ENST00000635917 UNC93AQ86WB7 457 aa13.24□□□□□ -0.29
CACNA1A-219ENST00000635917 RHOT1Q8IXI2 618 aa13.24□□□□□ -0.29
CACNA1A-219ENST00000635917 ARFGAP1Q8N6T3 406 aa13.24□□□□□ -0.29
CACNA1A-219ENST00000635917 C18orf8Q96DM3 657 aa13.24□□□□□ -0.29
CACNA1A-219ENST00000635917 HEXIM2Q96MH2 286 aaKnown RBP13.24□□□□□ -0.29
CACNA1A-219ENST00000635917 TRAIPQ9BWF2 469 aa13.24□□□□□ -0.29
CACNA1A-219ENST00000635917 LRRC19Q9H756 370 aa13.24□□□□□ -0.29
CACNA1A-219ENST00000635917 GOLGA2P5Q9HBQ8 144 aa13.24□□□□□ -0.29
CACNA1A-219ENST00000635917 CHST12Q9NRB3 414 aa13.24□□□□□ -0.29
CACNA1A-219ENST00000635917 LCMT1Q9UIC8 334 aa13.24□□□□□ -0.29
CACNA1A-219ENST00000635917 TSPAN16Q9UKR8 245 aa13.24□□□□□ -0.29
CACNA1A-219ENST00000635917 TDRD15B5MCY1 1934 aaKnown RBP13.24□□□□□ -0.29
CACNA1A-219ENST00000635917 GOLGA6L10A0A0M3HER8 536 aa13.23□□□□□ -0.29
CACNA1A-219ENST00000635917 AGPSO00116 658 aa13.23□□□□□ -0.29
CACNA1A-219ENST00000635917 FGFR1P11362 822 aa13.23□□□□□ -0.29
CACNA1A-219ENST00000635917 CUL1Q13616 776 aa13.23□□□□□ -0.29
CACNA1A-219ENST00000635917 DHX34Q14147 1143 aaKnown RBP13.23□□□□□ -0.29
CACNA1A-219ENST00000635917 PIGHQ14442 188 aaPredicted RBP13.23□□□□□ -0.29
CACNA1A-219ENST00000635917 STILQ15468 1287 aa13.23□□□□□ -0.29
CACNA1A-219ENST00000635917 KCTD19Q17RG1 926 aaPredicted RBP13.23□□□□□ -0.29
CACNA1A-219ENST00000635917 PPP1R26Q5T8A7 1209 aaPredicted RBP13.23□□□□□ -0.29
CACNA1A-219ENST00000635917 SND1Q7KZF4 910 aaKnown RBP eCLIP13.23□□□□□ -0.29
CACNA1A-219ENST00000635917 RSPH3Q86UC2 560 aa13.23□□□□□ -0.29
CACNA1A-219ENST00000635917 TTC30AQ86WT1 665 aa13.23□□□□□ -0.29
CACNA1A-219ENST00000635917 MREGQ8N565 214 aa13.23□□□□□ -0.29
CACNA1A-219ENST00000635917 TSEN2Q8NCE0 465 aaKnown RBP13.23□□□□□ -0.29
CACNA1A-219ENST00000635917 JOSD2Q8TAC2 188 aa13.23□□□□□ -0.29
CACNA1A-219ENST00000635917 CD99L2Q8TCZ2 262 aa13.23□□□□□ -0.29
CACNA1A-219ENST00000635917 ZFP42Q96MM3 310 aa13.23□□□□□ -0.29
CACNA1A-219ENST00000635917 NEUROG2Q9H2A3 272 aa13.23□□□□□ -0.29
CACNA1A-219ENST00000635917 FAM105AQ9NUU6 356 aa13.23□□□□□ -0.29
CACNA1A-219ENST00000635917 WDR35Q9P2L0 1181 aa13.23□□□□□ -0.29
CACNA1A-219ENST00000635917 PARP2Q9UGN5 583 aa13.23□□□□□ -0.29
CACNA1A-219ENST00000635917 FAM187AA6NFU0 413 aa13.23□□□□□ -0.29
CACNA1A-219ENST00000635917 KPNA7A9QM74 516 aa13.23□□□□□ -0.29
CACNA1A-219ENST00000635917 M0QYV0 167 aa13.23□□□□□ -0.29
CACNA1A-219ENST00000635917 M0QZ92 97 aa13.23□□□□□ -0.29
CACNA1A-219ENST00000635917 XPOTO43592 962 aaKnown RBP13.23□□□□□ -0.29
CACNA1A-219ENST00000635917 TRPA1O75762 1119 aa13.23□□□□□ -0.29
CACNA1A-219ENST00000635917 GABBR2O75899 941 aa13.23□□□□□ -0.29
CACNA1A-219ENST00000635917 CTSHP09668 335 aa13.23□□□□□ -0.29
CACNA1A-219ENST00000635917 PNPLA4P41247 253 aa13.23□□□□□ -0.29
CACNA1A-219ENST00000635917 DRG2P55039 364 aaKnown RBP13.23□□□□□ -0.29
CACNA1A-219ENST00000635917 ATP13A4Q4VNC1 1196 aa13.23□□□□□ -0.29
CACNA1A-219ENST00000635917 FAM47CQ5HY64 1035 aa13.23□□□□□ -0.29
CACNA1A-219ENST00000635917 TXNRD3NBQ6F5E7 133 aa13.23□□□□□ -0.29
CACNA1A-219ENST00000635917 MRPL10Q7Z7H8 261 aaKnown RBP13.23□□□□□ -0.29
CACNA1A-219ENST00000635917 DDX42Q86XP3 938 aaKnown RBP eCLIP13.23□□□□□ -0.29
CACNA1A-219ENST00000635917 CRYBG2Q8N1P7 616 aa13.23□□□□□ -0.29
CACNA1A-219ENST00000635917 PCSK9Q8NBP7 692 aaKnown RBP13.23□□□□□ -0.29
CACNA1A-219ENST00000635917 EXD1Q8NHP7 514 aa13.23□□□□□ -0.29
CACNA1A-219ENST00000635917 PXYLP1Q8TE99 480 aa13.23□□□□□ -0.29
CACNA1A-219ENST00000635917 SLC35F5Q8WV83 523 aa13.23□□□□□ -0.29
CACNA1A-219ENST00000635917 SLCO2A1Q92959 643 aa13.23□□□□□ -0.29
CACNA1A-219ENST00000635917 TRIM51Q9BSJ1 452 aa13.23□□□□□ -0.29
CACNA1A-219ENST00000635917 PLVAPQ9BX97 442 aa13.23□□□□□ -0.29
CACNA1A-219ENST00000635917 DDX20Q9UHI6 824 aaKnown RBP13.23□□□□□ -0.29
CACNA1A-219ENST00000635917 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.23□□□□□ -0.29
CACNA1A-219ENST00000635917 DAPK3O43293 454 aa13.22□□□□□ -0.29
CACNA1A-219ENST00000635917 HCRTO43612 131 aa13.22□□□□□ -0.29
CACNA1A-219ENST00000635917 KRT3P12035 628 aa13.22□□□□□ -0.29
CACNA1A-219ENST00000635917 ATF7P17544 494 aaPredicted RBP13.22□□□□□ -0.29
CACNA1A-219ENST00000635917 IGFBP6P24592 240 aaPredicted RBP13.22□□□□□ -0.29
CACNA1A-219ENST00000635917 COILP38432 576 aaPredicted RBP13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms