RNA–Protein interactions for RNA: ENST00000635750.1

SCN1A-209, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,299 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-209ENST00000635750 CDC42BPGQ6DT37 1551 aa5.78□□□□□ -1.48
SCN1A-209ENST00000635750 PALLDQ8WX93 1383 aa5.77□□□□□ -1.48
SCN1A-209ENST00000635750 STX7O15400 261 aaKnown RBP5.77□□□□□ -1.48
SCN1A-209ENST00000635750 VPS26AO75436 327 aa5.77□□□□□ -1.48
SCN1A-209ENST00000635750 HIST1H2ABP04908 130 aa5.77□□□□□ -1.48
SCN1A-209ENST00000635750 PRR29P0C7W0 189 aa5.77□□□□□ -1.48
SCN1A-209ENST00000635750 CTSEP14091 401 aa5.77□□□□□ -1.48
SCN1A-209ENST00000635750 PTPN3P26045 913 aa5.77□□□□□ -1.48
SCN1A-209ENST00000635750 COASYQ13057 564 aa5.77□□□□□ -1.48
SCN1A-209ENST00000635750 STX3Q13277 289 aa5.77□□□□□ -1.48
SCN1A-209ENST00000635750 DHX34Q14147 1143 aaKnown RBP5.77□□□□□ -1.48
SCN1A-209ENST00000635750 WDR72Q3MJ13 1102 aa5.77□□□□□ -1.48
SCN1A-209ENST00000635750 IZUMO3Q5VZ72 239 aa5.77□□□□□ -1.48
SCN1A-209ENST00000635750 HIST3H2AQ7L7L0 130 aa5.77□□□□□ -1.48
SCN1A-209ENST00000635750 CCDC103Q8IW40 242 aa5.77□□□□□ -1.48
SCN1A-209ENST00000635750 SLC44A2Q8IWA5 706 aaPredicted RBP5.77□□□□□ -1.48
SCN1A-209ENST00000635750 RGL4Q8IZJ4 473 aa5.77□□□□□ -1.48
SCN1A-209ENST00000635750 IPMKQ8NFU5 416 aa5.77□□□□□ -1.48
SCN1A-209ENST00000635750 HIST1H2ACQ93077 130 aa5.77□□□□□ -1.48
SCN1A-209ENST00000635750 MOV10L1Q9BXT6 1211 aaKnown RBP5.77□□□□□ -1.48
SCN1A-209ENST00000635750 WDCPQ9H6R7 721 aa5.77□□□□□ -1.48
SCN1A-209ENST00000635750 SNX6Q9UNH7 406 aa5.77□□□□□ -1.48
SCN1A-209ENST00000635750 CENPXA8MT69 81 aa5.77□□□□□ -1.49
SCN1A-209ENST00000635750 CHURC1-FNTBB4DL54 471 aa5.77□□□□□ -1.49
SCN1A-209ENST00000635750 TAF4O00268 1085 aa5.77□□□□□ -1.49
SCN1A-209ENST00000635750 RHOBTB3O94955 611 aa5.77□□□□□ -1.49
SCN1A-209ENST00000635750 KLHL2O95198 593 aa5.77□□□□□ -1.49
SCN1A-209ENST00000635750 ALBP02768 609 aa5.77□□□□□ -1.49
SCN1A-209ENST00000635750 POTEIP0CG38 1075 aa5.77□□□□□ -1.49
SCN1A-209ENST00000635750 PGM1P36871 562 aa5.77□□□□□ -1.49
SCN1A-209ENST00000635750 USP11P51784 963 aa5.77□□□□□ -1.49
SCN1A-209ENST00000635750 GEMIN4P57678 1058 aaKnown RBP5.77□□□□□ -1.49
SCN1A-209ENST00000635750 ITGADQ13349 1161 aa5.77□□□□□ -1.49
SCN1A-209ENST00000635750 MTMR2Q13614 643 aa5.77□□□□□ -1.49
SCN1A-209ENST00000635750 AGAP9Q5VTM2 703 aa5.77□□□□□ -1.49
SCN1A-209ENST00000635750 TTC39BQ5VTQ0 682 aaPredicted RBP5.77□□□□□ -1.49
SCN1A-209ENST00000635750 PACS1Q6VY07 963 aa5.77□□□□□ -1.49
SCN1A-209ENST00000635750 PALB2Q86YC2 1186 aa5.77□□□□□ -1.49
SCN1A-209ENST00000635750 CASP10Q92851 521 aa5.77□□□□□ -1.49
SCN1A-209ENST00000635750 USP7Q93009 1102 aa5.77□□□□□ -1.49
SCN1A-209ENST00000635750 EAF2Q96CJ1 260 aaPredicted RBP5.77□□□□□ -1.49
SCN1A-209ENST00000635750 RMND5BQ96G75 393 aaPredicted RBP5.77□□□□□ -1.49
SCN1A-209ENST00000635750 REXO5Q96IC2 774 aaKnown RBP5.77□□□□□ -1.49
SCN1A-209ENST00000635750 CFAP73A6NFT4 308 aa5.77□□□□□ -1.49
SCN1A-209ENST00000635750 PDZK1P1A8MUH7 402 aa5.77□□□□□ -1.49
SCN1A-209ENST00000635750 PIK3CDO00329 1044 aa5.77□□□□□ -1.49
SCN1A-209ENST00000635750 CYP7B1O75881 506 aa5.77□□□□□ -1.49
SCN1A-209ENST00000635750 SUPT20HL2P0C7V6 817 aa5.77□□□□□ -1.49
SCN1A-209ENST00000635750 IFNAR1P17181 557 aa5.77□□□□□ -1.49
SCN1A-209ENST00000635750 THPOP40225 353 aa5.77□□□□□ -1.49
SCN1A-209ENST00000635750 MTA1Q13330 715 aa5.77□□□□□ -1.49
SCN1A-209ENST00000635750 STAT4Q14765 748 aa5.77□□□□□ -1.49
SCN1A-209ENST00000635750 DNAL1Q4LDG9 190 aa5.77□□□□□ -1.49
SCN1A-209ENST00000635750 CENPLQ8N0S6 344 aaPredicted RBP5.77□□□□□ -1.49
SCN1A-209ENST00000635750 CARNMT1Q8N4J0 409 aa5.77□□□□□ -1.49
SCN1A-209ENST00000635750 TMEM237Q96Q45 408 aa5.77□□□□□ -1.49
SCN1A-209ENST00000635750 CNPPD1Q9BV87 410 aa5.77□□□□□ -1.49
SCN1A-209ENST00000635750 CCDC134Q9H6E4 229 aa5.77□□□□□ -1.49
SCN1A-209ENST00000635750 MRPL39Q9NYK5 338 aaKnown RBP5.77□□□□□ -1.49
SCN1A-209ENST00000635750 COPG2Q9UBF2 871 aa5.77□□□□□ -1.49
SCN1A-209ENST00000635750 DSEQ9UL01 958 aa5.77□□□□□ -1.49
SCN1A-209ENST00000635750 SIK3Q9Y2K2 1263 aa5.77□□□□□ -1.49
SCN1A-209ENST00000635750 OPLAHO14841 1288 aa5.77□□□□□ -1.49
SCN1A-209ENST00000635750 CKMP06732 381 aa5.77□□□□□ -1.49
SCN1A-209ENST00000635750 ENO1P06733 434 aaKnown RBP5.77□□□□□ -1.49
SCN1A-209ENST00000635750 PABPC1P11940 636 aaKnown RBP5.77□□□□□ -1.49
SCN1A-209ENST00000635750 AVPR1AP37288 418 aa5.77□□□□□ -1.49
SCN1A-209ENST00000635750 CACNB3P54284 484 aa5.77□□□□□ -1.49
SCN1A-209ENST00000635750 MAGOHP61326 146 aaKnown RBP5.77□□□□□ -1.49
SCN1A-209ENST00000635750 SH3BP5LQ7L8J4 393 aa5.77□□□□□ -1.49
SCN1A-209ENST00000635750 ADGRF4Q8IZF3 695 aa5.77□□□□□ -1.49
SCN1A-209ENST00000635750 KCTD17Q8N5Z5 321 aa5.77□□□□□ -1.49
SCN1A-209ENST00000635750 CCDC126Q96EE4 140 aa5.77□□□□□ -1.49
SCN1A-209ENST00000635750 PDCD10Q9BUL8 212 aa5.77□□□□□ -1.49
SCN1A-209ENST00000635750 GOLPH3Q9H4A6 298 aa5.77□□□□□ -1.49
SCN1A-209ENST00000635750 EPS8L2Q9H6S3 715 aa5.77□□□□□ -1.49
SCN1A-209ENST00000635750 VIPAS39Q9H9C1 493 aa5.77□□□□□ -1.49
SCN1A-209ENST00000635750 PCDHB6Q9Y5E3 794 aa5.77□□□□□ -1.49
SCN1A-209ENST00000635750 NR2E3Q9Y5X4 410 aa5.77□□□□□ -1.49
SCN1A-209ENST00000635750 CDY2AQ9Y6F7 541 aa5.77□□□□□ -1.49
SCN1A-209ENST00000635750 CDY1Q9Y6F8 540 aa5.77□□□□□ -1.49
SCN1A-209ENST00000635750 MYH10P35580 1976 aa5.77□□□□□ -1.49
SCN1A-209ENST00000635750 SF3B1O75533 1304 aaKnown RBP eCLIP5.77□□□□□ -1.49
SCN1A-209ENST00000635750 CCL15-CCL14A0A0B4J2E2 113 aa5.77□□□□□ -1.49
SCN1A-209ENST00000635750 GNG14A0A1W2PPG7 69 aa5.77□□□□□ -1.49
SCN1A-209ENST00000635750 TRPC5OSA6NMA1 111 aa5.77□□□□□ -1.49
SCN1A-209ENST00000635750 H7C1W4 665 aa5.77□□□□□ -1.49
SCN1A-209ENST00000635750 CELF2O95319 508 aaKnown RBP5.77□□□□□ -1.49
SCN1A-209ENST00000635750 MYBL2P10244 700 aa5.77□□□□□ -1.49
SCN1A-209ENST00000635750 OXCT1P55809 520 aa5.77□□□□□ -1.49
SCN1A-209ENST00000635750 TMEM62Q0P6H9 643 aa5.77□□□□□ -1.49
SCN1A-209ENST00000635750 CCL15Q16663 113 aa5.77□□□□□ -1.49
SCN1A-209ENST00000635750 ARMCX4Q5H9R4 360 aa5.77□□□□□ -1.49
SCN1A-209ENST00000635750 NAPEPLDQ6IQ20 393 aa5.77□□□□□ -1.49
SCN1A-209ENST00000635750 CCDC149Q6ZUS6 474 aa5.77□□□□□ -1.49
SCN1A-209ENST00000635750 ZNF655Q8N720 491 aaPredicted RBP5.77□□□□□ -1.49
SCN1A-209ENST00000635750 SH3GL1Q99961 368 aa5.77□□□□□ -1.49
SCN1A-209ENST00000635750 INTS2Q9H0H0 1204 aaKnown RBP5.77□□□□□ -1.49
SCN1A-209ENST00000635750 SERHL2Q9H4I8 314 aa5.77□□□□□ -1.49
SCN1A-209ENST00000635750 SERHLQ9NQF3 203 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms