RNA–Protein interactions for RNA: ENST00000634934.2

LINC00339-208, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,518 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-208ENST00000634934 TMEM139Q8IV31 216 aa15.38■□□□□ 0.05
LINC00339-208ENST00000634934 CNGA4Q8IV77 575 aa15.38■□□□□ 0.05
LINC00339-208ENST00000634934 FAM71AQ8IYT1 594 aa15.38■□□□□ 0.05
LINC00339-208ENST00000634934 SPATA18Q8TC71 538 aa15.38■□□□□ 0.05
LINC00339-208ENST00000634934 SPPL3Q8TCT6 385 aa15.38■□□□□ 0.05
LINC00339-208ENST00000634934 GDPD5Q8WTR4 605 aa15.38■□□□□ 0.05
LINC00339-208ENST00000634934 POF1BQ8WVV4 589 aa15.38■□□□□ 0.05
LINC00339-208ENST00000634934 AUTS2Q8WXX7 1259 aa15.38■□□□□ 0.05
LINC00339-208ENST00000634934 ELOVL4Q9GZR5 314 aa15.38■□□□□ 0.05
LINC00339-208ENST00000634934 DNAI2Q9GZS0 605 aa15.38■□□□□ 0.05
LINC00339-208ENST00000634934 DPEP3Q9H4B8 488 aa15.38■□□□□ 0.05
LINC00339-208ENST00000634934 CHST7Q9NS84 486 aa15.38■□□□□ 0.05
LINC00339-208ENST00000634934 MYO6Q9UM54 1294 aa15.38■□□□□ 0.05
LINC00339-208ENST00000634934 LZTS1Q9Y250 596 aa15.38■□□□□ 0.05
LINC00339-208ENST00000634934 NME7Q9Y5B8 376 aa15.38■□□□□ 0.05
LINC00339-208ENST00000634934 MYO9BQ13459 2157 aa15.37■□□□□ 0.05
LINC00339-208ENST00000634934 SPTBN5Q9NRC6 3674 aaKnown RBP15.37■□□□□ 0.05
LINC00339-208ENST00000634934 GRM6O15303 877 aa15.37■□□□□ 0.05
LINC00339-208ENST00000634934 ATP8B1O43520 1251 aa15.37■□□□□ 0.05
LINC00339-208ENST00000634934 MFAP3LO75121 409 aa15.37■□□□□ 0.05
LINC00339-208ENST00000634934 CALCAP01258 141 aa15.37■□□□□ 0.05
LINC00339-208ENST00000634934 H2AFXP16104 143 aaPredicted RBP15.37■□□□□ 0.05
LINC00339-208ENST00000634934 RAD23BP54727 409 aa15.37■□□□□ 0.05
LINC00339-208ENST00000634934 PSMC1P62191 440 aaKnown RBP15.37■□□□□ 0.05
LINC00339-208ENST00000634934 DSG1Q02413 1049 aa15.37■□□□□ 0.05
LINC00339-208ENST00000634934 PSMD5Q16401 504 aa15.37■□□□□ 0.05
LINC00339-208ENST00000634934 ASIC2Q16515 512 aa15.37■□□□□ 0.05
LINC00339-208ENST00000634934 TSR1Q2NL82 804 aaKnown RBP15.37■□□□□ 0.05
LINC00339-208ENST00000634934 LNX1Q8TBB1 728 aaPredicted RBP15.37■□□□□ 0.05
LINC00339-208ENST00000634934 TMEM176AQ96HP8 235 aa15.37■□□□□ 0.05
LINC00339-208ENST00000634934 HEXIM2Q96MH2 286 aaKnown RBP15.37■□□□□ 0.05
LINC00339-208ENST00000634934 RTP3Q9BQQ7 232 aa15.37■□□□□ 0.05
LINC00339-208ENST00000634934 SYT15Q9BQS2 421 aa15.37■□□□□ 0.05
LINC00339-208ENST00000634934 ZBP1Q9H171 429 aa15.37■□□□□ 0.05
LINC00339-208ENST00000634934 NUCKS1Q9H1E3 243 aaKnown RBP15.37■□□□□ 0.05
LINC00339-208ENST00000634934 ENTPD7Q9NQZ7 604 aa15.37■□□□□ 0.05
LINC00339-208ENST00000634934 MRPL17Q9NRX2 175 aaKnown RBP15.37■□□□□ 0.05
LINC00339-208ENST00000634934 DNAI1Q9UI46 699 aa15.37■□□□□ 0.05
LINC00339-208ENST00000634934 CNTN6Q9UQ52 1028 aa15.37■□□□□ 0.05
LINC00339-208ENST00000634934 PLXNA4Q9HCM2 1894 aa15.36■□□□□ 0.05
LINC00339-208ENST00000634934 H3BNC9 293 aa15.36■□□□□ 0.05
LINC00339-208ENST00000634934 ATP2C2O75185 946 aa15.36■□□□□ 0.05
LINC00339-208ENST00000634934 CD19P15391 556 aa15.36■□□□□ 0.05
LINC00339-208ENST00000634934 FERP16591 822 aa15.36■□□□□ 0.05
LINC00339-208ENST00000634934 RPL17P18621 184 aaKnown RBP15.36■□□□□ 0.05
LINC00339-208ENST00000634934 FECHP22830 423 aa15.36■□□□□ 0.05
LINC00339-208ENST00000634934 DNAJB1P25685 340 aa15.36■□□□□ 0.05
LINC00339-208ENST00000634934 ARPP19P56211 112 aa15.36■□□□□ 0.05
LINC00339-208ENST00000634934 TSPY1Q01534 308 aa15.36■□□□□ 0.05
LINC00339-208ENST00000634934 UBE3AQ05086 875 aa15.36■□□□□ 0.05
LINC00339-208ENST00000634934 MRPL58Q14197 206 aaKnown RBP15.36■□□□□ 0.05
LINC00339-208ENST00000634934 ADGRE1Q14246 886 aa15.36■□□□□ 0.05
LINC00339-208ENST00000634934 BMS1Q14692 1282 aaKnown RBP15.36■□□□□ 0.05
LINC00339-208ENST00000634934 KIAA0319Q5VV43 1072 aa15.36■□□□□ 0.05
LINC00339-208ENST00000634934 SLC4A11Q8NBS3 891 aa15.36■□□□□ 0.05
LINC00339-208ENST00000634934 OR8K1Q8NGG5 319 aa15.36■□□□□ 0.05
LINC00339-208ENST00000634934 OR10T2Q8NGX3 314 aa15.36■□□□□ 0.05
LINC00339-208ENST00000634934 MICAL1Q8TDZ2 1067 aa15.36■□□□□ 0.05
LINC00339-208ENST00000634934 PIK3R5Q8WYR1 880 aa15.36■□□□□ 0.05
LINC00339-208ENST00000634934 TNIP3Q96KP6 325 aa15.36■□□□□ 0.05
LINC00339-208ENST00000634934 PANX2Q96RD6 677 aa15.36■□□□□ 0.05
LINC00339-208ENST00000634934 TCF25Q9BQ70 676 aa15.36■□□□□ 0.05
LINC00339-208ENST00000634934 LPIN3Q9BQK8 851 aa15.36■□□□□ 0.05
LINC00339-208ENST00000634934 ACBD6Q9BR61 282 aa15.36■□□□□ 0.05
LINC00339-208ENST00000634934 ACP6Q9NPH0 428 aa15.36■□□□□ 0.05
LINC00339-208ENST00000634934 TLR9Q9NR96 1032 aa15.36■□□□□ 0.05
LINC00339-208ENST00000634934 ABHD10Q9NUJ1 306 aa15.36■□□□□ 0.05
LINC00339-208ENST00000634934 CDH9Q9ULB4 789 aa15.36■□□□□ 0.05
LINC00339-208ENST00000634934 ATG2AQ2TAZ0 1938 aa15.36■□□□□ 0.05
LINC00339-208ENST00000634934 OR6C75A6NL08 312 aa15.35■□□□□ 0.05
LINC00339-208ENST00000634934 LPXNO60711 386 aa15.35■□□□□ 0.05
LINC00339-208ENST00000634934 CXCL14O95715 111 aa15.35■□□□□ 0.05
LINC00339-208ENST00000634934 PAEPP09466 180 aa15.35■□□□□ 0.05
LINC00339-208ENST00000634934 CCDC172P0C7W6 258 aa15.35■□□□□ 0.05
LINC00339-208ENST00000634934 CTSAP10619 480 aa15.35■□□□□ 0.05
LINC00339-208ENST00000634934 PTPN1P18031 435 aaKnown RBP15.35■□□□□ 0.05
LINC00339-208ENST00000634934 GNA15P30679 374 aa15.35■□□□□ 0.05
LINC00339-208ENST00000634934 CDR1P51861 262 aa15.35■□□□□ 0.05
LINC00339-208ENST00000634934 ZNF132P52740 706 aa15.35■□□□□ 0.05
LINC00339-208ENST00000634934 BPIFB4P59827 614 aa15.35■□□□□ 0.05
LINC00339-208ENST00000634934 ERVFC1P60507 584 aa15.35■□□□□ 0.05
LINC00339-208ENST00000634934 TUBB4BP68371 445 aa15.35■□□□□ 0.05
LINC00339-208ENST00000634934 PTK2Q05397 1052 aa15.35■□□□□ 0.05
LINC00339-208ENST00000634934 TUBB2AQ13885 445 aa15.35■□□□□ 0.05
LINC00339-208ENST00000634934 PLPP4Q5VZY2 271 aa15.35■□□□□ 0.05
LINC00339-208ENST00000634934 SLC47A2Q86VL8 602 aa15.35■□□□□ 0.05
LINC00339-208ENST00000634934 FMNL3Q8IVF7 1028 aa15.35■□□□□ 0.05
LINC00339-208ENST00000634934 GLYCTKQ8IVS8 523 aa15.35■□□□□ 0.05
LINC00339-208ENST00000634934 REXO1L1PQ8IX06 675 aa15.35■□□□□ 0.05
LINC00339-208ENST00000634934 TC2NQ8N9U0 490 aa15.35■□□□□ 0.05
LINC00339-208ENST00000634934 B3GALNT2Q8NCR0 500 aa15.35■□□□□ 0.05
LINC00339-208ENST00000634934 TMEM209Q96SK2 561 aa15.35■□□□□ 0.05
LINC00339-208ENST00000634934 TUBB2BQ9BVA1 445 aa15.35■□□□□ 0.05
LINC00339-208ENST00000634934 ZNHIT6Q9NWK9 470 aaKnown RBP15.35■□□□□ 0.05
LINC00339-208ENST00000634934 AIPL1Q9NZN9 384 aa15.35■□□□□ 0.05
LINC00339-208ENST00000634934 MTRRQ9UBK8 725 aa15.35■□□□□ 0.05
LINC00339-208ENST00000634934 PRDM4Q9UKN5 801 aa15.35■□□□□ 0.05
LINC00339-208ENST00000634934 SSX2IPQ9Y2D8 614 aa15.35■□□□□ 0.05
LINC00339-208ENST00000634934 XIRP2A4UGR9 3374 aa15.35■□□□□ 0.05
LINC00339-208ENST00000634934 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms