RNA–Protein interactions for RNA: ENST00000634363.1

SNRNP48-203, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 781 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-203ENST00000634363 EXOC1Q9NV70 894 aa16.78■□□□□ 0.28
SNRNP48-203ENST00000634363 ASB3Q9Y575 518 aa16.78■□□□□ 0.28
SNRNP48-203ENST00000634363 TYMPP19971 482 aa16.77■□□□□ 0.28
SNRNP48-203ENST00000634363 CASP5P51878 434 aa16.77■□□□□ 0.28
SNRNP48-203ENST00000634363 MGAT5BQ3V5L5 792 aa16.77■□□□□ 0.28
SNRNP48-203ENST00000634363 SLC39A12Q504Y0 691 aa16.77■□□□□ 0.28
SNRNP48-203ENST00000634363 ARHGAP29Q52LW3 1261 aa16.77■□□□□ 0.28
SNRNP48-203ENST00000634363 SPATA1Q5VX52 437 aa16.77■□□□□ 0.28
SNRNP48-203ENST00000634363 SLFN12LQ6IEE8 588 aa16.77■□□□□ 0.28
SNRNP48-203ENST00000634363 C1orf228Q6PIY5 440 aa16.77■□□□□ 0.28
SNRNP48-203ENST00000634363 TXNDC11Q6PKC3 985 aa16.77■□□□□ 0.28
SNRNP48-203ENST00000634363 CEP68Q76N32 757 aa16.77■□□□□ 0.28
SNRNP48-203ENST00000634363 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.77■□□□□ 0.28
SNRNP48-203ENST00000634363 ITIH5Q86UX2 942 aa16.77■□□□□ 0.28
SNRNP48-203ENST00000634363 RALGPS2Q86X27 583 aaPredicted RBP16.77■□□□□ 0.28
SNRNP48-203ENST00000634363 HPS3Q969F9 1004 aa16.77■□□□□ 0.28
SNRNP48-203ENST00000634363 MSANTD3Q96H12 275 aa16.77■□□□□ 0.28
SNRNP48-203ENST00000634363 LPIN3Q9BQK8 851 aa16.77■□□□□ 0.28
SNRNP48-203ENST00000634363 MSTO1Q9BUK6 570 aa16.77■□□□□ 0.28
SNRNP48-203ENST00000634363 TMEM206Q9H813 350 aa16.77■□□□□ 0.28
SNRNP48-203ENST00000634363 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.77■□□□□ 0.28
SNRNP48-203ENST00000634363 MYBPHLA2RUH7 354 aa16.76■□□□□ 0.27
SNRNP48-203ENST00000634363 EIF3DO15371 548 aaKnown RBP eCLIP16.76■□□□□ 0.27
SNRNP48-203ENST00000634363 PRPF6O94906 941 aaKnown RBP16.76■□□□□ 0.27
SNRNP48-203ENST00000634363 FGF19O95750 216 aa16.76■□□□□ 0.27
SNRNP48-203ENST00000634363 KCNA4P22459 653 aa16.76■□□□□ 0.27
SNRNP48-203ENST00000634363 HOXC13P31276 330 aa16.76■□□□□ 0.27
SNRNP48-203ENST00000634363 CTHP32929 405 aa16.76■□□□□ 0.27
SNRNP48-203ENST00000634363 ACOT2P49753 483 aa16.76■□□□□ 0.27
SNRNP48-203ENST00000634363 CYP4F8P98187 520 aa16.76■□□□□ 0.27
SNRNP48-203ENST00000634363 TNK2Q07912 1038 aa16.76■□□□□ 0.27
SNRNP48-203ENST00000634363 WDR44Q5JSH3 913 aa16.76■□□□□ 0.27
SNRNP48-203ENST00000634363 DGKKQ5KSL6 1271 aa16.76■□□□□ 0.27
SNRNP48-203ENST00000634363 C9orf57Q5W0N0 161 aa16.76■□□□□ 0.27
SNRNP48-203ENST00000634363 LONP2Q86WA8 852 aa16.76■□□□□ 0.27
SNRNP48-203ENST00000634363 FMR1NBQ8N0W7 255 aaPredicted RBP16.76■□□□□ 0.27
SNRNP48-203ENST00000634363 GIPC2Q8TF65 315 aa16.76■□□□□ 0.27
SNRNP48-203ENST00000634363 MKNK1Q9BUB5 465 aa16.76■□□□□ 0.27
SNRNP48-203ENST00000634363 STRA6Q9BX79 667 aa16.76■□□□□ 0.27
SNRNP48-203ENST00000634363 FGFBP2Q9BYJ0 223 aa16.76■□□□□ 0.27
SNRNP48-203ENST00000634363 SMG9Q9H0W8 520 aaKnown RBP16.76■□□□□ 0.27
SNRNP48-203ENST00000634363 SEMA4GQ9NTN9 838 aa16.76■□□□□ 0.27
SNRNP48-203ENST00000634363 C2orf42Q9NWW7 574 aa16.76■□□□□ 0.27
SNRNP48-203ENST00000634363 HOOK1Q9UJC3 728 aaKnown RBP16.76■□□□□ 0.27
SNRNP48-203ENST00000634363 NUP210Q8TEM1 1887 aaPredicted RBP16.76■□□□□ 0.27
SNRNP48-203ENST00000634363 UBE4BO95155 1302 aa16.75■□□□□ 0.27
SNRNP48-203ENST00000634363 ZNF638Q14966 1978 aaKnown RBP16.75■□□□□ 0.27
SNRNP48-203ENST00000634363 A0A0B4J269 797 aa16.75■□□□□ 0.27
SNRNP48-203ENST00000634363 K7ESF4 209 aa16.75■□□□□ 0.27
SNRNP48-203ENST00000634363 NFICP08651 508 aa16.75■□□□□ 0.27
SNRNP48-203ENST00000634363 TUFMP49411 452 aaKnown RBP16.75■□□□□ 0.27
SNRNP48-203ENST00000634363 KCNA1Q09470 495 aa16.75■□□□□ 0.27
SNRNP48-203ENST00000634363 TMEM132DQ14C87 1099 aa16.75■□□□□ 0.27
SNRNP48-203ENST00000634363 VEPH1Q14D04 833 aa16.75■□□□□ 0.27
SNRNP48-203ENST00000634363 POSTNQ15063 836 aa16.75■□□□□ 0.27
SNRNP48-203ENST00000634363 SLC39A4Q6P5W5 647 aa16.75■□□□□ 0.27
SNRNP48-203ENST00000634363 METTL23Q86XA0 190 aa16.75■□□□□ 0.27
SNRNP48-203ENST00000634363 CD302Q8IX05 232 aa16.75■□□□□ 0.27
SNRNP48-203ENST00000634363 OR10T2Q8NGX3 314 aa16.75■□□□□ 0.27
SNRNP48-203ENST00000634363 BPIFB1Q8TDL5 484 aa16.75■□□□□ 0.27
SNRNP48-203ENST00000634363 POMGNT1Q8WZA1 660 aa16.75■□□□□ 0.27
SNRNP48-203ENST00000634363 GCNAQ96QF7 691 aa16.75■□□□□ 0.27
SNRNP48-203ENST00000634363 TSPAN18Q96SJ8 248 aa16.75■□□□□ 0.27
SNRNP48-203ENST00000634363 TASP1Q9H6P5 420 aa16.75■□□□□ 0.27
SNRNP48-203ENST00000634363 THG1LQ9NWX6 298 aaKnown RBP16.75■□□□□ 0.27
SNRNP48-203ENST00000634363 CPSF3Q9UKF6 684 aaKnown RBP16.75■□□□□ 0.27
SNRNP48-203ENST00000634363 ATG2BQ96BY7 2078 aa16.74■□□□□ 0.27
SNRNP48-203ENST00000634363 SCN1AP35498 2009 aa16.74■□□□□ 0.27
SNRNP48-203ENST00000634363 ANKRD63C9JTQ0 380 aa16.74■□□□□ 0.27
SNRNP48-203ENST00000634363 PIRO00625 290 aa16.74■□□□□ 0.27
SNRNP48-203ENST00000634363 CYB561D2O14569 222 aa16.74■□□□□ 0.27
SNRNP48-203ENST00000634363 FAM189A1O60320 539 aa16.74■□□□□ 0.27
SNRNP48-203ENST00000634363 GDF9O60383 454 aa16.74■□□□□ 0.27
SNRNP48-203ENST00000634363 KRT37O76014 449 aa16.74■□□□□ 0.27
SNRNP48-203ENST00000634363 PRAMEF12O95522 483 aa16.74■□□□□ 0.27
SNRNP48-203ENST00000634363 RPN1P04843 607 aaKnown RBP16.74■□□□□ 0.27
SNRNP48-203ENST00000634363 ADRB2P07550 413 aa16.74■□□□□ 0.27
SNRNP48-203ENST00000634363 PRR29P0C7W0 189 aa16.74■□□□□ 0.27
SNRNP48-203ENST00000634363 CNR2P34972 360 aa16.74■□□□□ 0.27
SNRNP48-203ENST00000634363 UBE2HP62256 183 aa16.74■□□□□ 0.27
SNRNP48-203ENST00000634363 EHHADHQ08426 723 aa16.74■□□□□ 0.27
SNRNP48-203ENST00000634363 KMT5BQ4FZB7 885 aa16.74■□□□□ 0.27
SNRNP48-203ENST00000634363 PPM1JQ5JR12 505 aa16.74■□□□□ 0.27
SNRNP48-203ENST00000634363 PRR23CQ6ZRP0 262 aa16.74■□□□□ 0.27
SNRNP48-203ENST00000634363 THEM5Q8N1Q8 247 aa16.74■□□□□ 0.27
SNRNP48-203ENST00000634363 GLIS3Q8NEA6 775 aa16.74■□□□□ 0.27
SNRNP48-203ENST00000634363 NETO1Q8TDF5 533 aa16.74■□□□□ 0.27
SNRNP48-203ENST00000634363 SLC39A2Q9NP94 309 aa16.74■□□□□ 0.27
SNRNP48-203ENST00000634363 GKN1Q9NS71 199 aa16.74■□□□□ 0.27
SNRNP48-203ENST00000634363 TISP43B9A030 160 aa16.73■□□□□ 0.27
SNRNP48-203ENST00000634363 AXIN1O15169 862 aa16.73■□□□□ 0.27
SNRNP48-203ENST00000634363 KLRC4O43908 158 aa16.73■□□□□ 0.27
SNRNP48-203ENST00000634363 LRP3O75074 770 aa16.73■□□□□ 0.27
SNRNP48-203ENST00000634363 GADD45BO75293 160 aaPredicted RBP16.73■□□□□ 0.27
SNRNP48-203ENST00000634363 PXNP49023 591 aaPredicted RBP16.73■□□□□ 0.27
SNRNP48-203ENST00000634363 DPYDQ12882 1025 aa16.73■□□□□ 0.27
SNRNP48-203ENST00000634363 PSMD2Q13200 908 aa16.73■□□□□ 0.27
SNRNP48-203ENST00000634363 CSRP2Q16527 193 aa16.73■□□□□ 0.27
SNRNP48-203ENST00000634363 FAM160A2Q8N612 972 aaPredicted RBP16.73■□□□□ 0.27
SNRNP48-203ENST00000634363 ENGASEQ8NFI3 743 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms