RNA–Protein interactions for RNA: ENST00000630925.1

SDCBP-213, Transcript of syndecan binding protein, humanhuman

TSL 5 BASIC

Gene SDCBP, Length 2,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-213ENST00000630925 VILLO15195 856 aa5.19□□□□□ -1.58
SDCBP-213ENST00000630925 LETM1O95202 739 aaPredicted RBP5.19□□□□□ -1.58
SDCBP-213ENST00000630925 PNPP00491 289 aa5.19□□□□□ -1.58
SDCBP-213ENST00000630925 CKMP06732 381 aa5.19□□□□□ -1.58
SDCBP-213ENST00000630925 LTA4HP09960 611 aaKnown RBP5.19□□□□□ -1.58
SDCBP-213ENST00000630925 BUD31P41223 144 aaPredicted RBP5.19□□□□□ -1.58
SDCBP-213ENST00000630925 PSMC6P62333 389 aa5.19□□□□□ -1.58
SDCBP-213ENST00000630925 HNRNPUQ00839 825 aaKnown RBP eCLIP5.19□□□□□ -1.58
SDCBP-213ENST00000630925 SPRED3Q2MJR0 410 aa5.19□□□□□ -1.58
SDCBP-213ENST00000630925 CCDC57Q2TAC2 916 aa5.19□□□□□ -1.58
SDCBP-213ENST00000630925 ZNF805Q5CZA5 627 aa5.19□□□□□ -1.58
SDCBP-213ENST00000630925 TCP11X2Q5H9J9 407 aa5.19□□□□□ -1.58
SDCBP-213ENST00000630925 TCTE1Q5JU00 501 aa5.19□□□□□ -1.58
SDCBP-213ENST00000630925 STYK1Q6J9G0 422 aa5.19□□□□□ -1.58
SDCBP-213ENST00000630925 NFRKBQ6P4R8 1299 aa5.19□□□□□ -1.58
SDCBP-213ENST00000630925 CORO6Q6QEF8 472 aa5.19□□□□□ -1.58
SDCBP-213ENST00000630925 CLEC2AQ6UVW9 174 aa5.19□□□□□ -1.58
SDCBP-213ENST00000630925 ARHGAP27Q6ZUM4 889 aa5.19□□□□□ -1.58
SDCBP-213ENST00000630925 BBS12Q6ZW61 710 aa5.19□□□□□ -1.58
SDCBP-213ENST00000630925 MARK2Q7KZI7 788 aaKnown RBP5.19□□□□□ -1.58
SDCBP-213ENST00000630925 TAOK1Q7L7X3 1001 aa5.19□□□□□ -1.58
SDCBP-213ENST00000630925 CAND1Q86VP6 1230 aaKnown RBP5.19□□□□□ -1.58
SDCBP-213ENST00000630925 SESTD1Q86VW0 696 aa5.19□□□□□ -1.58
SDCBP-213ENST00000630925 MON1AQ86VX9 555 aa5.19□□□□□ -1.58
SDCBP-213ENST00000630925 ADSSL1Q8N142 457 aa5.19□□□□□ -1.58
SDCBP-213ENST00000630925 GBP7Q8N8V2 638 aaPredicted RBP5.19□□□□□ -1.58
SDCBP-213ENST00000630925 ANKS4BQ8N8V4 417 aa5.19□□□□□ -1.58
SDCBP-213ENST00000630925 IFI44Q8TCB0 444 aa5.19□□□□□ -1.58
SDCBP-213ENST00000630925 STK35Q8TDR2 534 aa5.19□□□□□ -1.58
SDCBP-213ENST00000630925 TBC1D22AQ8WUA7 517 aa5.19□□□□□ -1.58
SDCBP-213ENST00000630925 RAPGEF5Q92565 580 aa5.19□□□□□ -1.58
SDCBP-213ENST00000630925 ANKS1AQ92625 1134 aa5.19□□□□□ -1.58
SDCBP-213ENST00000630925 DHX58Q96C10 678 aa5.19□□□□□ -1.58
SDCBP-213ENST00000630925 C1orf159Q96HA4 380 aa5.19□□□□□ -1.58
SDCBP-213ENST00000630925 FAM167AQ96KS9 214 aa5.19□□□□□ -1.58
SDCBP-213ENST00000630925 CNOT6LQ96LI5 555 aaKnown RBP5.19□□□□□ -1.58
SDCBP-213ENST00000630925 CMTM3Q96MX0 182 aa5.19□□□□□ -1.58
SDCBP-213ENST00000630925 ZKSCAN3Q9BRR0 538 aa5.19□□□□□ -1.58
SDCBP-213ENST00000630925 FOXP3Q9BZS1 431 aa5.19□□□□□ -1.58
SDCBP-213ENST00000630925 MTMR12Q9C0I1 747 aa5.19□□□□□ -1.58
SDCBP-213ENST00000630925 XRN2Q9H0D6 950 aaKnown RBP eCLIP5.19□□□□□ -1.58
SDCBP-213ENST00000630925 KLHL25Q9H0H3 589 aa5.19□□□□□ -1.58
SDCBP-213ENST00000630925 TSPYL1Q9H0U9 437 aa5.19□□□□□ -1.58
SDCBP-213ENST00000630925 OPA3Q9H6K4 179 aa5.19□□□□□ -1.58
SDCBP-213ENST00000630925 C14orf93Q9H972 538 aaKnown RBP5.19□□□□□ -1.58
SDCBP-213ENST00000630925 DNAJC28Q9NX36 388 aa5.19□□□□□ -1.58
SDCBP-213ENST00000630925 MYO1AQ9UBC5 1043 aa5.19□□□□□ -1.58
SDCBP-213ENST00000630925 REV1Q9UBZ9 1251 aa5.19□□□□□ -1.58
SDCBP-213ENST00000630925 MALT1Q9UDY8 824 aa5.19□□□□□ -1.58
SDCBP-213ENST00000630925 GPN3Q9UHW5 284 aaPredicted RBP5.19□□□□□ -1.58
SDCBP-213ENST00000630925 SCAF8Q9UPN6 1271 aaKnown RBP5.19□□□□□ -1.58
SDCBP-213ENST00000630925 HPS5Q9UPZ3 1129 aa5.19□□□□□ -1.58
SDCBP-213ENST00000630925 HIF3AQ9Y2N7 669 aa5.19□□□□□ -1.58
SDCBP-213ENST00000630925 COQ6Q9Y2Z9 468 aa5.19□□□□□ -1.58
SDCBP-213ENST00000630925 PSAT1Q9Y617 370 aa5.19□□□□□ -1.58
SDCBP-213ENST00000630925 ATP8B3O60423 1300 aa5.19□□□□□ -1.58
SDCBP-213ENST00000630925 FGD6Q6ZV73 1430 aa5.18□□□□□ -1.58
SDCBP-213ENST00000630925 ABCC1P33527 1531 aa5.18□□□□□ -1.58
SDCBP-213ENST00000630925 PTPDC1A2A3K4 754 aa5.18□□□□□ -1.58
SDCBP-213ENST00000630925 METTL12A8MUP2 240 aa5.18□□□□□ -1.58
SDCBP-213ENST00000630925 MAPK13O15264 365 aa5.18□□□□□ -1.58
SDCBP-213ENST00000630925 EXOC3O60645 756 aa5.18□□□□□ -1.58
SDCBP-213ENST00000630925 LILRA1O75019 489 aa5.18□□□□□ -1.58
SDCBP-213ENST00000630925 RNF40O75150 1001 aa5.18□□□□□ -1.58
SDCBP-213ENST00000630925 RB1P06400 928 aa5.18□□□□□ -1.58
SDCBP-213ENST00000630925 OSMP13725 252 aa5.18□□□□□ -1.58
SDCBP-213ENST00000630925 EIF2DP41214 584 aaKnown RBP5.18□□□□□ -1.58
SDCBP-213ENST00000630925 ABCG1P45844 678 aa5.18□□□□□ -1.58
SDCBP-213ENST00000630925 DHPSP49366 369 aaPredicted RBP5.18□□□□□ -1.58
SDCBP-213ENST00000630925 AP3M2P53677 418 aa5.18□□□□□ -1.58
SDCBP-213ENST00000630925 SRSF2Q01130 221 aaKnown RBP5.18□□□□□ -1.58
SDCBP-213ENST00000630925 MAMLD1Q13495 774 aa5.18□□□□□ -1.58
SDCBP-213ENST00000630925 HABP2Q14520 560 aaPredicted RBP5.18□□□□□ -1.58
SDCBP-213ENST00000630925 LAPTM4AQ15012 233 aa5.18□□□□□ -1.58
SDCBP-213ENST00000630925 TBCCQ15814 346 aa5.18□□□□□ -1.58
SDCBP-213ENST00000630925 SMU1Q2TAY7 513 aa5.18□□□□□ -1.58
SDCBP-213ENST00000630925 LINC01559Q495D7 138 aa5.18□□□□□ -1.58
SDCBP-213ENST00000630925 TMEM177Q53S58 311 aa5.18□□□□□ -1.58
SDCBP-213ENST00000630925 CAVIN1Q6NZI2 390 aaKnown RBP5.18□□□□□ -1.58
SDCBP-213ENST00000630925 HHIPL2Q6UWX4 724 aa5.18□□□□□ -1.58
SDCBP-213ENST00000630925 ISLR2Q6UXK2 745 aa5.18□□□□□ -1.58
SDCBP-213ENST00000630925 LRIG3Q6UXM1 1119 aa5.18□□□□□ -1.58
SDCBP-213ENST00000630925 Q6ZNB5 142 aa5.18□□□□□ -1.58
SDCBP-213ENST00000630925 TMC6Q7Z403 805 aa5.18□□□□□ -1.58
SDCBP-213ENST00000630925 FBXW8Q8N3Y1 598 aa5.18□□□□□ -1.58
SDCBP-213ENST00000630925 NIPA2Q8N8Q9 360 aa5.18□□□□□ -1.58
SDCBP-213ENST00000630925 MRPL43Q8N983 215 aaKnown RBP5.18□□□□□ -1.58
SDCBP-213ENST00000630925 ZBTB8BQ8NAP8 495 aaPredicted RBP5.18□□□□□ -1.58
SDCBP-213ENST00000630925 ATP11CQ8NB49 1132 aa5.18□□□□□ -1.58
SDCBP-213ENST00000630925 CNNM3Q8NE01 707 aa5.18□□□□□ -1.58
SDCBP-213ENST00000630925 GPR150Q8NGU9 434 aa5.18□□□□□ -1.58
SDCBP-213ENST00000630925 GOLGA5Q8TBA6 731 aa5.18□□□□□ -1.58
SDCBP-213ENST00000630925 KLHDC4Q8TBB5 520 aa5.18□□□□□ -1.58
SDCBP-213ENST00000630925 WASF1Q92558 559 aa5.18□□□□□ -1.58
SDCBP-213ENST00000630925 RNF125Q96EQ8 232 aa5.18□□□□□ -1.58
SDCBP-213ENST00000630925 HS6ST2Q96MM7 605 aa5.18□□□□□ -1.58
SDCBP-213ENST00000630925 PRAM1Q96QH2 718 aa5.18□□□□□ -1.58
SDCBP-213ENST00000630925 TWNKQ96RR1 684 aa5.18□□□□□ -1.58
SDCBP-213ENST00000630925 GAL3ST1Q99999 423 aa5.18□□□□□ -1.58
SDCBP-213ENST00000630925 NOL10Q9BSC4 688 aaKnown RBP5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms