RNA–Protein interactions for RNA: ENST00000629036.2

DDX41-219, Transcript of DEAD-box helicase 41, humanhuman

TSL 4 BASIC

Gene DDX41, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-219ENST00000629036 TWF1Q12792 350 aa11.9□□□□□ -0.5
DDX41-219ENST00000629036 MYO1EQ12965 1108 aa11.9□□□□□ -0.5
DDX41-219ENST00000629036 PTPN21Q16825 1174 aa11.9□□□□□ -0.5
DDX41-219ENST00000629036 CBWD6Q4V339 395 aa11.9□□□□□ -0.5
DDX41-219ENST00000629036 CBWD3Q5JTY5 395 aa11.9□□□□□ -0.5
DDX41-219ENST00000629036 CBWD5Q5RIA9 395 aa11.9□□□□□ -0.5
DDX41-219ENST00000629036 SPOPLQ6IQ16 392 aa11.9□□□□□ -0.5
DDX41-219ENST00000629036 ERMP1Q7Z2K6 904 aa11.9□□□□□ -0.5
DDX41-219ENST00000629036 NPAS3Q8IXF0 933 aa11.9□□□□□ -0.5
DDX41-219ENST00000629036 HS6ST3Q8IZP7 471 aa11.9□□□□□ -0.5
DDX41-219ENST00000629036 TRIML1Q8N9V2 468 aa11.9□□□□□ -0.5
DDX41-219ENST00000629036 TDRD5Q8NAT2 981 aaKnown RBP11.9□□□□□ -0.5
DDX41-219ENST00000629036 TAS1R2Q8TE23 839 aa11.9□□□□□ -0.5
DDX41-219ENST00000629036 SEMA4DQ92854 862 aa11.9□□□□□ -0.5
DDX41-219ENST00000629036 SLC35C1Q96A29 364 aa11.9□□□□□ -0.5
DDX41-219ENST00000629036 TCEAL4Q96EI5 215 aa11.9□□□□□ -0.5
DDX41-219ENST00000629036 LPIN3Q9BQK8 851 aa11.9□□□□□ -0.5
DDX41-219ENST00000629036 BCO2Q9BYV7 579 aa11.9□□□□□ -0.5
DDX41-219ENST00000629036 ZNF334Q9HCZ1 680 aaPredicted RBP11.9□□□□□ -0.5
DDX41-219ENST00000629036 HMGXB4Q9UGU5 601 aa11.9□□□□□ -0.5
DDX41-219ENST00000629036 CTNND2Q9UQB3 1225 aa11.9□□□□□ -0.5
DDX41-219ENST00000629036 SLC27A5Q9Y2P5 690 aa11.9□□□□□ -0.5
DDX41-219ENST00000629036 NR2E1Q9Y466 385 aa11.9□□□□□ -0.5
DDX41-219ENST00000629036 MYBPHLA2RUH7 354 aa11.89□□□□□ -0.51
DDX41-219ENST00000629036 PRR23AA6NEV1 266 aa11.89□□□□□ -0.51
DDX41-219ENST00000629036 PSMA7O14818 248 aa11.89□□□□□ -0.51
DDX41-219ENST00000629036 XYLBO75191 536 aa11.89□□□□□ -0.51
DDX41-219ENST00000629036 ASGR2P07307 311 aa11.89□□□□□ -0.51
DDX41-219ENST00000629036 FAM163BP0C2L3 166 aa11.89□□□□□ -0.51
DDX41-219ENST00000629036 HAPLN1P10915 354 aaPredicted RBP11.89□□□□□ -0.51
DDX41-219ENST00000629036 CEBPBP17676 345 aa11.89□□□□□ -0.51
DDX41-219ENST00000629036 FSHRP23945 695 aa11.89□□□□□ -0.51
DDX41-219ENST00000629036 FCARP24071 287 aa11.89□□□□□ -0.51
DDX41-219ENST00000629036 RAP1GAPP47736 663 aa11.89□□□□□ -0.51
DDX41-219ENST00000629036 FKBP3Q00688 224 aaKnown RBP11.89□□□□□ -0.51
DDX41-219ENST00000629036 HTR4Q13639 388 aa11.89□□□□□ -0.51
DDX41-219ENST00000629036 ZNF699Q32M78 642 aa11.89□□□□□ -0.51
DDX41-219ENST00000629036 WDR72Q3MJ13 1102 aa11.89□□□□□ -0.51
DDX41-219ENST00000629036 PABPC1LQ4VXU2 614 aaKnown RBP11.89□□□□□ -0.51
DDX41-219ENST00000629036 GET4Q7L5D6 327 aaPredicted RBP11.89□□□□□ -0.51
DDX41-219ENST00000629036 OTOP3Q7RTS5 596 aa11.89□□□□□ -0.51
DDX41-219ENST00000629036 METTL23Q86XA0 190 aa11.89□□□□□ -0.51
DDX41-219ENST00000629036 NELFBQ8WX92 580 aa11.89□□□□□ -0.51
DDX41-219ENST00000629036 FGF13Q92913 245 aa11.89□□□□□ -0.51
DDX41-219ENST00000629036 SYAP1Q96A49 352 aaPredicted RBP11.89□□□□□ -0.51
DDX41-219ENST00000629036 PI4K2AQ9BTU6 479 aa11.89□□□□□ -0.51
DDX41-219ENST00000629036 IRF2BPLQ9H1B7 796 aa11.89□□□□□ -0.51
DDX41-219ENST00000629036 DPEP3Q9H4B8 488 aa11.89□□□□□ -0.51
DDX41-219ENST00000629036 IL21Q9HBE4 155 aa11.89□□□□□ -0.51
DDX41-219ENST00000629036 TMEM8AQ9HCN3 771 aa11.89□□□□□ -0.51
DDX41-219ENST00000629036 ABCB6Q9NP58 842 aa11.89□□□□□ -0.51
DDX41-219ENST00000629036 COQ4Q9Y3A0 265 aa11.89□□□□□ -0.51
DDX41-219ENST00000629036 MIA3Q5JRA6 1907 aa11.89□□□□□ -0.51
DDX41-219ENST00000629036 SPDYE4A6NLX3 237 aa11.88□□□□□ -0.51
DDX41-219ENST00000629036 CETN3O15182 167 aa11.88□□□□□ -0.51
DDX41-219ENST00000629036 TADA3O75528 432 aa11.88□□□□□ -0.51
DDX41-219ENST00000629036 LRG1P02750 347 aa11.88□□□□□ -0.51
DDX41-219ENST00000629036 LAMP2P13473 410 aa11.88□□□□□ -0.51
DDX41-219ENST00000629036 HMGA1P17096 107 aaKnown RBP11.88□□□□□ -0.51
DDX41-219ENST00000629036 GTF2H1P32780 548 aa11.88□□□□□ -0.51
DDX41-219ENST00000629036 LHX1P48742 406 aa11.88□□□□□ -0.51
DDX41-219ENST00000629036 GPR15P49685 360 aa11.88□□□□□ -0.51
DDX41-219ENST00000629036 CDH8P55286 799 aa11.88□□□□□ -0.51
DDX41-219ENST00000629036 MARSP56192 900 aaKnown RBP11.88□□□□□ -0.51
DDX41-219ENST00000629036 PSMC1P62191 440 aaKnown RBP11.88□□□□□ -0.51
DDX41-219ENST00000629036 SIGLEC14Q08ET2 396 aa11.88□□□□□ -0.51
DDX41-219ENST00000629036 INCA1Q0VD86 236 aa11.88□□□□□ -0.51
DDX41-219ENST00000629036 BIRC3Q13489 604 aa11.88□□□□□ -0.51
DDX41-219ENST00000629036 DPCR1Q3MIW9 517 aa11.88□□□□□ -0.51
DDX41-219ENST00000629036 CFAP221Q4G0U5 840 aa11.88□□□□□ -0.51
DDX41-219ENST00000629036 KLHL10Q6JEL2 608 aa11.88□□□□□ -0.51
DDX41-219ENST00000629036 GAREM2Q75VX8 874 aa11.88□□□□□ -0.51
DDX41-219ENST00000629036 TMEM150AQ86TG1 271 aa11.88□□□□□ -0.51
DDX41-219ENST00000629036 IRF2BP1Q8IU81 584 aa11.88□□□□□ -0.51
DDX41-219ENST00000629036 THEM5Q8N1Q8 247 aa11.88□□□□□ -0.51
DDX41-219ENST00000629036 STKLD1Q8NE28 680 aa11.88□□□□□ -0.51
DDX41-219ENST00000629036 SHKBP1Q8TBC3 707 aa11.88□□□□□ -0.51
DDX41-219ENST00000629036 SPPL2BQ8TCT7 592 aa11.88□□□□□ -0.51
DDX41-219ENST00000629036 C2orf15Q8WU43 125 aaKnown RBP11.88□□□□□ -0.51
DDX41-219ENST00000629036 PSMG2Q969U7 264 aa11.88□□□□□ -0.51
DDX41-219ENST00000629036 MYLPFQ96A32 169 aa11.88□□□□□ -0.51
DDX41-219ENST00000629036 ASIC4Q96FT7 647 aa11.88□□□□□ -0.51
DDX41-219ENST00000629036 CEP63Q96MT8 703 aa11.88□□□□□ -0.51
DDX41-219ENST00000629036 SYT15Q9BQS2 421 aa11.88□□□□□ -0.51
DDX41-219ENST00000629036 PIDD1Q9HB75 910 aa11.88□□□□□ -0.51
DDX41-219ENST00000629036 LIMD1Q9UGP4 676 aa11.88□□□□□ -0.51
DDX41-219ENST00000629036 GTF3C4Q9UKN8 822 aa11.88□□□□□ -0.51
DDX41-219ENST00000629036 CDH7Q9ULB5 785 aa11.88□□□□□ -0.51
DDX41-219ENST00000629036 KRT37O76014 449 aa11.87□□□□□ -0.51
DDX41-219ENST00000629036 MICAL2O94851 1124 aa11.87□□□□□ -0.51
DDX41-219ENST00000629036 PDGFBP01127 241 aaPredicted RBP11.87□□□□□ -0.51
DDX41-219ENST00000629036 EPB41P11171 864 aaKnown RBP11.87□□□□□ -0.51
DDX41-219ENST00000629036 PTPN2P17706 415 aa11.87□□□□□ -0.51
DDX41-219ENST00000629036 CYP2F1P24903 491 aa11.87□□□□□ -0.51
DDX41-219ENST00000629036 PCSK1P29120 753 aa11.87□□□□□ -0.51
DDX41-219ENST00000629036 ELF1P32519 619 aa11.87□□□□□ -0.51
DDX41-219ENST00000629036 PPP1R2P41236 205 aa11.87□□□□□ -0.51
DDX41-219ENST00000629036 PIK3CAP42336 1068 aa11.87□□□□□ -0.51
DDX41-219ENST00000629036 MXI1P50539 228 aa11.87□□□□□ -0.51
DDX41-219ENST00000629036 CACNA2D1P54289 1103 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms